RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 DNAH11Q96DT5 4516 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 TRBV27A0A0K0K1C4 114 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 LINC00959A0A1B0GUT2 108 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 A0A1B0GUV1 79 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 A6NDN8 102 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 H3BMG7 143 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 LEPROTL1O95214 131 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 MT-ND6P03923 174 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 IFI27P40305 119 aaPredicted RBP3.03□□□□□ -1.92
USP47-208ENST00000529813 ZC2HC1BQ5TFG8 222 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 ATP5L2Q7Z4Y8 100 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 NTN5Q8WTR8 489 aaPredicted RBP3.03□□□□□ -1.92
USP47-208ENST00000529813 TOMM7Q9P0U1 55 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 A0A1B0GXF2 115 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 FAM229AH3BQW9 127 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 COX8AP10176 69 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 ANAPC13Q9BS18 74 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 KRTAP9-2Q9BYQ4 174 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 ERG28Q9UKR5 140 aa3.03□□□□□ -1.92
USP47-208ENST00000529813 DNAH17Q9UFH2 4485 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 TRAV9-1A0A075B6T8 112 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 CHTF8P0CG12 524 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 XGP55808 180 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 FA2HQ7L5A8 372 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 KRTAP4-5Q9BYR2 181 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 CDC42SE2Q9NRR3 84 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 PRR34Q9NV39 138 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 HSPB8Q9UJY1 196 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 DNAH5Q8TE73 4624 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 TRBV20-1A0A075B6N2 111 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 J3QR89 54 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 M0QXV9 152 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 COX7A2LO14548 114 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 COX6A2Q02221 97 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 PET117Q6UWS5 81 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 C2orf66Q6UXQ4 117 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 CDIP1Q9H305 208 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 PPDPFQ9H3Y8 114 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 CYSLTR1Q9Y271 337 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 FAT2Q9NYQ8 4349 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 LRP1BQ9NZR2 4599 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 GAGE2BQ13066 116 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 TTTY13Q9BZ97 58 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 VCX2Q9H322 139 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 UBE2D4Q9Y2X8 147 aa3.02□□□□□ -1.93
USP47-208ENST00000529813 DNAH6Q9C0G6 4158 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 CCDC179H3BU77 68 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 H7C423 109 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 CDK2AP2O75956 126 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 FXYD2P54710 66 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 Q5VSD8 79 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 SCXQ7RTU7 201 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 PCP2Q8IVA1 136 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 CAMK2N2Q96S95 79 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 A0A0J9YXV3 536 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 SCGB3A1Q96QR1 104 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 MAP1LC3CQ9BXW4 147 aa3.01□□□□□ -1.93
USP47-208ENST00000529813 DMBT1Q9UGM3 2413 aaPredicted RBP3□□□□□ -1.93
USP47-208ENST00000529813 IGHV3-64A0A075B6Q5 118 aa3□□□□□ -1.93
USP47-208ENST00000529813 NMUP48645 174 aa3□□□□□ -1.93
USP47-208ENST00000529813 RPL18AQ02543 176 aaKnown RBP3□□□□□ -1.93
USP47-208ENST00000529813 SPAG11BQ08648 103 aa3□□□□□ -1.93
USP47-208ENST00000529813 ORMDL2Q53FV1 153 aa3□□□□□ -1.93
USP47-208ENST00000529813 CD164L2Q6UWJ8 174 aa3□□□□□ -1.93
USP47-208ENST00000529813 Q8N8P6 123 aa3□□□□□ -1.93
USP47-208ENST00000529813 IGLV4-69A0A075B6H9 119 aa3□□□□□ -1.93
USP47-208ENST00000529813 IGHV1-58A0A0C4DH39 117 aa3□□□□□ -1.93
USP47-208ENST00000529813 A0A1B0GWB2 263 aa3□□□□□ -1.93
USP47-208ENST00000529813 APOMO95445 188 aa3□□□□□ -1.93
USP47-208ENST00000529813 SYCNQ0VAF6 134 aa3□□□□□ -1.93
USP47-208ENST00000529813 FOXI1Q12951 378 aa3□□□□□ -1.93
USP47-208ENST00000529813 Q8N1X5 172 aa3□□□□□ -1.93
USP47-208ENST00000529813 CIRBP-AS1Q8TBR5 109 aa3□□□□□ -1.93
USP47-208ENST00000529813 NXT2Q9NPJ8 142 aaKnown RBP3□□□□□ -1.93
USP47-208ENST00000529813 SPANXA1Q9NS26 97 aa3□□□□□ -1.93
USP47-208ENST00000529813 NHP2Q9NX24 153 aaKnown RBP3□□□□□ -1.93
USP47-208ENST00000529813 HECTD4Q9Y4D8 3996 aa3□□□□□ -1.93
USP47-208ENST00000529813 F8W1H4 67 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 PRSS2P07478 247 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 SMIM13P0DJ93 91 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 INAFM2P0DMQ5 153 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 COX19Q49B96 90 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 LINC01545Q5VT33 79 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 C15orf56Q8N910 161 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 TMEM141Q96I45 108 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 CARD19Q96LW7 228 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 CHAC1Q9BUX1 264 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.99□□□□□ -1.93
USP47-208ENST00000529813 SLPIP03973 132 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 GAGE2EQ4V326 116 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 KRTAP26-1Q6PEX3 210 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 SFTA2Q6UW10 78 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 C9orf163Q8N9P6 203 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 GAGE2DQ9UEU5 116 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 RYR1P21817 5038 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 HERC2O95714 4834 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 IGLV4-3A0A075B6K6 122 aa2.99□□□□□ -1.93
USP47-208ENST00000529813 A0A087WYN8 130 aa2.98□□□□□ -1.93
USP47-208ENST00000529813 PANO1I0J062 215 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms