RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 A0A1W2PNN7 141 aa10.11□□□□□ -0.79
TSPAN4-218ENST00000529566 IGLC3P0DOY3 106 aa10.11□□□□□ -0.79
TSPAN4-218ENST00000529566 Q6ZRP5 223 aa10.11□□□□□ -0.79
TSPAN4-218ENST00000529566 SCO1O75880 301 aa10.1□□□□□ -0.79
TSPAN4-218ENST00000529566 ATP5LO75964 103 aa10.1□□□□□ -0.79
TSPAN4-218ENST00000529566 LINC00310P59036 64 aa10.1□□□□□ -0.79
TSPAN4-218ENST00000529566 RPL18AQ02543 176 aaKnown RBP10.1□□□□□ -0.79
TSPAN4-218ENST00000529566 TOMM7Q9P0U1 55 aa10.1□□□□□ -0.79
TSPAN4-218ENST00000529566 HNRNPA3P51991 378 aaKnown RBP10.09□□□□□ -0.79
TSPAN4-218ENST00000529566 NDUFA6P56556 154 aa10.09□□□□□ -0.79
TSPAN4-218ENST00000529566 C6orf226Q5I0X4 101 aa10.09□□□□□ -0.79
TSPAN4-218ENST00000529566 PACRGQ96M98 296 aaPredicted RBP10.09□□□□□ -0.79
TSPAN4-218ENST00000529566 PRSS2P07478 247 aa10.08□□□□□ -0.8
TSPAN4-218ENST00000529566 C9orf116Q5BN46 136 aaPredicted RBP10.08□□□□□ -0.8
TSPAN4-218ENST00000529566 BAGE3Q86Y29 109 aa10.08□□□□□ -0.8
TSPAN4-218ENST00000529566 SPINK8P0C7L1 97 aa10.07□□□□□ -0.8
TSPAN4-218ENST00000529566 CKS1BP61024 79 aa10.07□□□□□ -0.8
TSPAN4-218ENST00000529566 FAM19A2Q8N3H0 131 aa10.07□□□□□ -0.8
TSPAN4-218ENST00000529566 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
TSPAN4-218ENST00000529566 ZNF22P17026 224 aaPredicted RBP10.06□□□□□ -0.8
TSPAN4-218ENST00000529566 C7orf33Q8WU49 177 aa10.06□□□□□ -0.8
TSPAN4-218ENST00000529566 LRP1Q07954 4544 aaKnown RBP10.05□□□□□ -0.8
TSPAN4-218ENST00000529566 IGLV5-39A0A0G2JS06 123 aa10.05□□□□□ -0.8
TSPAN4-218ENST00000529566 NUPR1O60356 82 aa10.05□□□□□ -0.8
TSPAN4-218ENST00000529566 SERF1AO75920 110 aa10.05□□□□□ -0.8
TSPAN4-218ENST00000529566 COX7B2Q8TF08 81 aa10.05□□□□□ -0.8
TSPAN4-218ENST00000529566 IFI27L1Q96BM0 104 aa10.05□□□□□ -0.8
TSPAN4-218ENST00000529566 FAT3Q8TDW7 4589 aa10.04□□□□□ -0.8
TSPAN4-218ENST00000529566 TRAV12-1A0A0B4J245 112 aa10.04□□□□□ -0.8
TSPAN4-218ENST00000529566 FAM168BA1KXE4 195 aa10.04□□□□□ -0.8
TSPAN4-218ENST00000529566 C11orf86A6NJI1 115 aa10.04□□□□□ -0.8
TSPAN4-218ENST00000529566 F8VRH5 84 aa10.04□□□□□ -0.8
TSPAN4-218ENST00000529566 H3BRM9 83 aa10.04□□□□□ -0.8
TSPAN4-218ENST00000529566 HSBP1O75506 76 aa10.04□□□□□ -0.8
TSPAN4-218ENST00000529566 GAGE2EQ4V326 116 aa10.04□□□□□ -0.8
TSPAN4-218ENST00000529566 KRTAP7-1Q8IUC3 87 aa10.04□□□□□ -0.8
TSPAN4-218ENST00000529566 GAGE2DQ9UEU5 116 aa10.04□□□□□ -0.8
TSPAN4-218ENST00000529566 CXCL5P42830 114 aa10.03□□□□□ -0.8
TSPAN4-218ENST00000529566 C9orf129Q5T035 196 aaKnown RBP10.03□□□□□ -0.8
TSPAN4-218ENST00000529566 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.81
TSPAN4-218ENST00000529566 CHTOPQ9Y3Y2 248 aaKnown RBP10.02□□□□□ -0.81
TSPAN4-218ENST00000529566 HERC1Q15751 4861 aa10.02□□□□□ -0.81
TSPAN4-218ENST00000529566 KRTAP29-1A8MX34 341 aaPredicted RBP10□□□□□ -0.81
TSPAN4-218ENST00000529566 PHF5AQ7RTV0 110 aaKnown RBP10□□□□□ -0.81
TSPAN4-218ENST00000529566 DMBT1Q9UGM3 2413 aaPredicted RBP9.99□□□□□ -0.81
TSPAN4-218ENST00000529566 HIST1H2BKO60814 126 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 LEPROTL1O95214 131 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 HIST1H2BJP06899 126 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 HIST1H2BOP23527 126 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 HIST1H2BBP33778 126 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 HIST1H2BDP58876 126 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 HIST1H2BCP62807 126 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 HIST2H2BEQ16778 126 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 TMEM170BQ5T4T1 132 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 HIST1H2BHQ93079 126 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 HIST1H2BNQ99877 126 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 HIST1H2BMQ99879 126 aa9.98□□□□□ -0.81
TSPAN4-218ENST00000529566 ODF1Q14990 250 aa9.97□□□□□ -0.81
TSPAN4-218ENST00000529566 FAM19A5Q7Z5A7 132 aaPredicted RBP9.97□□□□□ -0.81
TSPAN4-218ENST00000529566 KRTAP11-1Q8IUC1 163 aa9.97□□□□□ -0.81
TSPAN4-218ENST00000529566 TMEM223A0PJW6 202 aa9.96□□□□□ -0.82
TSPAN4-218ENST00000529566 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.82
TSPAN4-218ENST00000529566 OXTP01178 125 aa9.95□□□□□ -0.82
TSPAN4-218ENST00000529566 SRSF9Q13242 221 aaKnown RBP eCLIP9.95□□□□□ -0.82
TSPAN4-218ENST00000529566 SERTAD4-AS1Q5TG53 156 aa9.95□□□□□ -0.82
TSPAN4-218ENST00000529566 PSORS1C2Q9UIG4 136 aa9.95□□□□□ -0.82
TSPAN4-218ENST00000529566 FABP4P15090 132 aa9.94□□□□□ -0.82
TSPAN4-218ENST00000529566 HSPB8Q9UJY1 196 aa9.94□□□□□ -0.82
TSPAN4-218ENST00000529566 ZNF625Q96I27 306 aaPredicted RBP9.93□□□□□ -0.82
TSPAN4-218ENST00000529566 H0Y8G0 127 aa9.92□□□□□ -0.82
TSPAN4-218ENST00000529566 M0QXV9 152 aa9.92□□□□□ -0.82
TSPAN4-218ENST00000529566 J3QL48 77 aa9.91□□□□□ -0.82
TSPAN4-218ENST00000529566 ERG28Q9UKR5 140 aa9.9□□□□□ -0.82
TSPAN4-218ENST00000529566 C22orf24Q9Y442 160 aa9.9□□□□□ -0.82
TSPAN4-218ENST00000529566 PFN2P35080 140 aa9.89□□□□□ -0.83
TSPAN4-218ENST00000529566 COA6Q5JTJ3 125 aaKnown RBP9.89□□□□□ -0.83
TSPAN4-218ENST00000529566 SPINK6Q6UWN8 80 aa9.89□□□□□ -0.83
TSPAN4-218ENST00000529566 PLA2G2DQ9UNK4 145 aa9.89□□□□□ -0.83
TSPAN4-218ENST00000529566 TNXBP22105 4242 aa9.89□□□□□ -0.83
TSPAN4-218ENST00000529566 COX17Q14061 63 aa9.88□□□□□ -0.83
TSPAN4-218ENST00000529566 C1orf137Q5JT78 98 aa9.88□□□□□ -0.83
TSPAN4-218ENST00000529566 SFTA2Q6UW10 78 aa9.88□□□□□ -0.83
TSPAN4-218ENST00000529566 PMCHL2Q9BQD1 86 aa9.88□□□□□ -0.83
TSPAN4-218ENST00000529566 MT1HL1P0DM35 61 aa9.87□□□□□ -0.83
TSPAN4-218ENST00000529566 S100A1P23297 94 aa9.87□□□□□ -0.83
TSPAN4-218ENST00000529566 PLNP26678 52 aa9.87□□□□□ -0.83
TSPAN4-218ENST00000529566 TP73-AS1Q9UF72 201 aa9.87□□□□□ -0.83
TSPAN4-218ENST00000529566 IGLV5-37A0A075B6J1 123 aa9.86□□□□□ -0.83
TSPAN4-218ENST00000529566 DPM2O94777 84 aa9.86□□□□□ -0.83
TSPAN4-218ENST00000529566 MAP1LC3CQ9BXW4 147 aa9.86□□□□□ -0.83
TSPAN4-218ENST00000529566 SND1-IT1Q9HBX3 110 aa9.86□□□□□ -0.83
TSPAN4-218ENST00000529566 ATP6V1G1O75348 118 aa9.85□□□□□ -0.83
TSPAN4-218ENST00000529566 IGLV7-43P04211 117 aa9.85□□□□□ -0.83
TSPAN4-218ENST00000529566 UBE2BP63146 152 aa9.85□□□□□ -0.83
TSPAN4-218ENST00000529566 SYS1-DBNDD2H3BUS1 97 aa9.84□□□□□ -0.83
TSPAN4-218ENST00000529566 IGKCP01834 107 aa9.84□□□□□ -0.83
TSPAN4-218ENST00000529566 TSPEAR-AS2P59090 65 aa9.84□□□□□ -0.83
TSPAN4-218ENST00000529566 LBHQ53QV2 105 aaPredicted RBP9.84□□□□□ -0.83
TSPAN4-218ENST00000529566 MRPL55Q7Z7F7 128 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms