RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 F8WDY8 70 aa9□□□□□ -0.97
USF1-209ENST00000529476 NDUFA1O15239 70 aa9□□□□□ -0.97
USF1-209ENST00000529476 CDK2AP2O75956 126 aa9□□□□□ -0.97
USF1-209ENST00000529476 C3orf79P0CE67 100 aa9□□□□□ -0.97
USF1-209ENST00000529476 C6orf226Q5I0X4 101 aa9□□□□□ -0.97
USF1-209ENST00000529476 Q8N1X5 172 aa9□□□□□ -0.97
USF1-209ENST00000529476 COX7B2Q8TF08 81 aa9□□□□□ -0.97
USF1-209ENST00000529476 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
USF1-209ENST00000529476 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
USF1-209ENST00000529476 TMEM223A0PJW6 202 aa8.99□□□□□ -0.97
USF1-209ENST00000529476 DPM2O94777 84 aa8.99□□□□□ -0.97
USF1-209ENST00000529476 PLNP26678 52 aa8.99□□□□□ -0.97
USF1-209ENST00000529476 KRTDAPP60985 99 aa8.99□□□□□ -0.97
USF1-209ENST00000529476 SNRPEP62304 92 aaKnown RBP8.99□□□□□ -0.97
USF1-209ENST00000529476 S100A2P29034 98 aa8.98□□□□□ -0.97
USF1-209ENST00000529476 CKS1BP61024 79 aa8.98□□□□□ -0.97
USF1-209ENST00000529476 PET117Q6UWS5 81 aa8.98□□□□□ -0.97
USF1-209ENST00000529476 Q6ZSA8 131 aa8.98□□□□□ -0.97
USF1-209ENST00000529476 HIST1H2BLQ99880 126 aa8.98□□□□□ -0.97
USF1-209ENST00000529476 C6orf48Q9UBA6 75 aa8.98□□□□□ -0.97
USF1-209ENST00000529476 PANO1I0J062 215 aa8.97□□□□□ -0.97
USF1-209ENST00000529476 IGKCP01834 107 aa8.97□□□□□ -0.97
USF1-209ENST00000529476 HAMPP81172 84 aa8.97□□□□□ -0.97
USF1-209ENST00000529476 LINC01545Q5VT33 79 aa8.97□□□□□ -0.97
USF1-209ENST00000529476 C5orf52A6NGY3 159 aa8.96□□□□□ -0.98
USF1-209ENST00000529476 CHTF8P0CG12 524 aa8.96□□□□□ -0.98
USF1-209ENST00000529476 XGP55808 180 aa8.96□□□□□ -0.98
USF1-209ENST00000529476 RNF151Q2KHN1 245 aa8.96□□□□□ -0.98
USF1-209ENST00000529476 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.96□□□□□ -0.98
USF1-209ENST00000529476 UBR4Q5T4S7 5183 aa8.96□□□□□ -0.98
USF1-209ENST00000529476 A0A096LNI7 61 aa8.95□□□□□ -0.98
USF1-209ENST00000529476 TRBV30A0A0K0K1B3 111 aa8.95□□□□□ -0.98
USF1-209ENST00000529476 CXCL5P42830 114 aa8.95□□□□□ -0.98
USF1-209ENST00000529476 C9orf116Q5BN46 136 aaPredicted RBP8.95□□□□□ -0.98
USF1-209ENST00000529476 IGKV2-24A0A0C4DH68 120 aa8.94□□□□□ -0.98
USF1-209ENST00000529476 LOC107984640A0A0U1RRK4 108 aa8.94□□□□□ -0.98
USF1-209ENST00000529476 DMBT1Q9UGM3 2413 aaPredicted RBP8.94□□□□□ -0.98
USF1-209ENST00000529476 GAGE2BQ13066 116 aa8.93□□□□□ -0.98
USF1-209ENST00000529476 PKIGQ9Y2B9 76 aa8.93□□□□□ -0.98
USF1-209ENST00000529476 DNAH8Q96JB1 4490 aa8.92□□□□□ -0.98
USF1-209ENST00000529476 RPL18AQ02543 176 aaKnown RBP8.92□□□□□ -0.98
USF1-209ENST00000529476 CIRBPQ14011 172 aaKnown RBP8.92□□□□□ -0.98
USF1-209ENST00000529476 SCXQ7RTU7 201 aa8.92□□□□□ -0.98
USF1-209ENST00000529476 SPACA4Q8TDM5 124 aa8.92□□□□□ -0.98
USF1-209ENST00000529476 TMA7Q9Y2S6 64 aaKnown RBP8.92□□□□□ -0.98
USF1-209ENST00000529476 C20orf202A1L168 122 aa8.91□□□□□ -0.98
USF1-209ENST00000529476 TLX1NBP0CAT3 122 aa8.91□□□□□ -0.98
USF1-209ENST00000529476 PTTG1IPP53801 180 aa8.91□□□□□ -0.98
USF1-209ENST00000529476 HERVK_113P61574 105 aa8.91□□□□□ -0.98
USF1-209ENST00000529476 MAJINQ3KP22 176 aa8.91□□□□□ -0.98
USF1-209ENST00000529476 Q6ZRP5 223 aa8.91□□□□□ -0.98
USF1-209ENST00000529476 CIRBP-AS1Q8TBR5 109 aa8.91□□□□□ -0.98
USF1-209ENST00000529476 DPH3Q96FX2 82 aa8.91□□□□□ -0.98
USF1-209ENST00000529476 LEPROTO15243 131 aa8.9□□□□□ -0.98
USF1-209ENST00000529476 TSPEAR-AS2P59090 65 aa8.9□□□□□ -0.98
USF1-209ENST00000529476 ZNF625Q96I27 306 aaPredicted RBP8.9□□□□□ -0.98
USF1-209ENST00000529476 NDUFC2-KCTD14E9PQ53 114 aa8.89□□□□□ -0.99
USF1-209ENST00000529476 GAGE2EQ4V326 116 aa8.89□□□□□ -0.99
USF1-209ENST00000529476 STPG4Q8N801 248 aa8.89□□□□□ -0.99
USF1-209ENST00000529476 PLEKHB2Q96CS7 222 aa8.89□□□□□ -0.99
USF1-209ENST00000529476 GAGE2DQ9UEU5 116 aa8.89□□□□□ -0.99
USF1-209ENST00000529476 A0A087WYN8 130 aa8.88□□□□□ -0.99
USF1-209ENST00000529476 ATOH7Q8N100 152 aa8.88□□□□□ -0.99
USF1-209ENST00000529476 LINC00474Q9P2X8 69 aa8.88□□□□□ -0.99
USF1-209ENST00000529476 E9PLD3 99 aa8.87□□□□□ -0.99
USF1-209ENST00000529476 J3QQQ9 107 aa8.87□□□□□ -0.99
USF1-209ENST00000529476 NDUFA12Q9UI09 145 aa8.87□□□□□ -0.99
USF1-209ENST00000529476 SMR3BP02814 79 aaPredicted RBP8.86□□□□□ -0.99
USF1-209ENST00000529476 LGALS3P17931 250 aaKnown RBP8.86□□□□□ -0.99
USF1-209ENST00000529476 PFN2P35080 140 aa8.86□□□□□ -0.99
USF1-209ENST00000529476 SFTA2Q6UW10 78 aa8.86□□□□□ -0.99
USF1-209ENST00000529476 ERG28Q9UKR5 140 aa8.86□□□□□ -0.99
USF1-209ENST00000529476 PLAC8Q9NZF1 115 aa8.85□□□□□ -0.99
USF1-209ENST00000529476 IGKV2D-26A0A0A0MRZ7 120 aa8.84□□□□□ -0.99
USF1-209ENST00000529476 MYMXA0A1B0GTQ4 84 aa8.84□□□□□ -0.99
USF1-209ENST00000529476 A0A1W2PNN7 141 aa8.84□□□□□ -0.99
USF1-209ENST00000529476 INAFM2P0DMQ5 153 aa8.84□□□□□ -0.99
USF1-209ENST00000529476 C9orf129Q5T035 196 aaKnown RBP8.84□□□□□ -0.99
USF1-209ENST00000529476 XAGE1AQ9HD64 81 aa8.84□□□□□ -0.99
USF1-209ENST00000529476 FAM168BA1KXE4 195 aa8.83□□□□□ -1
USF1-209ENST00000529476 AKR1D1P51857 326 aa8.83□□□□□ -1
USF1-209ENST00000529476 HERV-K104P63124 156 aa8.83□□□□□ -1
USF1-209ENST00000529476 FAT1Q14517 4588 aa8.83□□□□□ -1
USF1-209ENST00000529476 EPM2AB3EWF7 344 aa8.82□□□□□ -1
USF1-209ENST00000529476 SCGB1D1O95968 90 aa8.82□□□□□ -1
USF1-209ENST00000529476 NMUP48645 174 aa8.82□□□□□ -1
USF1-209ENST00000529476 COX17Q14061 63 aa8.82□□□□□ -1
USF1-209ENST00000529476 ANKRD39Q53RE8 183 aa8.82□□□□□ -1
USF1-209ENST00000529476 MYCBP2O75592 4640 aa8.81□□□□□ -1
USF1-209ENST00000529476 A0A0U1RRA0 63 aa8.81□□□□□ -1
USF1-209ENST00000529476 LINC00158P58513 81 aa8.81□□□□□ -1
USF1-209ENST00000529476 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
USF1-209ENST00000529476 SMIM13P0DJ93 91 aa8.8□□□□□ -1
USF1-209ENST00000529476 FAM19A5Q7Z5A7 132 aaPredicted RBP8.8□□□□□ -1
USF1-209ENST00000529476 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
USF1-209ENST00000529476 LINC00528Q8N1L1 170 aa8.8□□□□□ -1
USF1-209ENST00000529476 TTTY13Q9BZ97 58 aa8.8□□□□□ -1
USF1-209ENST00000529476 SND1-IT1Q9HBX3 110 aa8.79□□□□□ -1
USF1-209ENST00000529476 SERTAD4-AS1Q5TG53 156 aa8.78□□□□□ -1
USF1-209ENST00000529476 A0A0J9YXY3 114 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms