RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 IGIPA6NJ69 53 aa8.55□□□□□ -1.04
TRIM3-208ENST00000529058 Q6ZUT4 128 aa8.55□□□□□ -1.04
TRIM3-208ENST00000529058 IGLV4-3A0A075B6K6 122 aa8.54□□□□□ -1.04
TRIM3-208ENST00000529058 PCP4L1A6NKN8 68 aa8.54□□□□□ -1.04
TRIM3-208ENST00000529058 NPSP0C0P6 89 aa8.54□□□□□ -1.04
TRIM3-208ENST00000529058 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
TRIM3-208ENST00000529058 Q6ZN92 141 aa8.54□□□□□ -1.04
TRIM3-208ENST00000529058 CSDC2Q9Y534 153 aaKnown RBP8.54□□□□□ -1.04
TRIM3-208ENST00000529058 H0Y8G0 127 aa8.53□□□□□ -1.04
TRIM3-208ENST00000529058 KRTDAPP60985 99 aa8.53□□□□□ -1.04
TRIM3-208ENST00000529058 MRPS36P82909 103 aaKnown RBP8.53□□□□□ -1.04
TRIM3-208ENST00000529058 HIGD2BQ4VC39 106 aa8.53□□□□□ -1.04
TRIM3-208ENST00000529058 RNASE13Q5GAN3 156 aaKnown RBP8.53□□□□□ -1.04
TRIM3-208ENST00000529058 PAPPA-AS1Q5QFB9 102 aa8.53□□□□□ -1.04
TRIM3-208ENST00000529058 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
TRIM3-208ENST00000529058 MAP1LC3CQ9BXW4 147 aa8.53□□□□□ -1.04
TRIM3-208ENST00000529058 IGLV4-60A0A075B6I1 120 aa8.52□□□□□ -1.05
TRIM3-208ENST00000529058 A0A1B0GUV1 79 aa8.52□□□□□ -1.05
TRIM3-208ENST00000529058 OR10D4PQ8NGN7 298 aa8.52□□□□□ -1.05
TRIM3-208ENST00000529058 C3orf79P0CE67 100 aa8.51□□□□□ -1.05
TRIM3-208ENST00000529058 TEX43Q6ZNM6 134 aa8.51□□□□□ -1.05
TRIM3-208ENST00000529058 FAM104AQ969W3 186 aa8.51□□□□□ -1.05
TRIM3-208ENST00000529058 CDC42SE2Q9NRR3 84 aa8.51□□□□□ -1.05
TRIM3-208ENST00000529058 SYS1-DBNDD2H3BUS1 97 aa8.5□□□□□ -1.05
TRIM3-208ENST00000529058 PMVKQ15126 192 aa8.5□□□□□ -1.05
TRIM3-208ENST00000529058 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
TRIM3-208ENST00000529058 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
TRIM3-208ENST00000529058 VCX2Q9H322 139 aa8.5□□□□□ -1.05
TRIM3-208ENST00000529058 PKIGQ9Y2B9 76 aa8.5□□□□□ -1.05
TRIM3-208ENST00000529058 TRAV12-1A0A0B4J245 112 aa8.49□□□□□ -1.05
TRIM3-208ENST00000529058 AMELXQ99217 191 aa8.49□□□□□ -1.05
TRIM3-208ENST00000529058 IGKV3OR2-268A0A0C4DH90 116 aa8.48□□□□□ -1.05
TRIM3-208ENST00000529058 C20orf202A1L168 122 aa8.48□□□□□ -1.05
TRIM3-208ENST00000529058 GAGE12HA6NDE8 117 aa8.48□□□□□ -1.05
TRIM3-208ENST00000529058 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
TRIM3-208ENST00000529058 CST9LQ9H4G1 147 aa8.48□□□□□ -1.05
TRIM3-208ENST00000529058 IGLV1-50A0A075B6I6 118 aa8.47□□□□□ -1.05
TRIM3-208ENST00000529058 GVQW2A0A096LPI5 108 aaPredicted RBP8.47□□□□□ -1.05
TRIM3-208ENST00000529058 CTAG1AP78358 180 aa8.47□□□□□ -1.05
TRIM3-208ENST00000529058 DIRC1Q969H9 104 aa8.47□□□□□ -1.05
TRIM3-208ENST00000529058 CHTOPQ9Y3Y2 248 aaKnown RBP8.47□□□□□ -1.05
TRIM3-208ENST00000529058 TRAV13-1A0A0B4J241 112 aa8.46□□□□□ -1.06
TRIM3-208ENST00000529058 LINC01545Q5VT33 79 aa8.46□□□□□ -1.06
TRIM3-208ENST00000529058 F8VRH5 84 aa8.45□□□□□ -1.06
TRIM3-208ENST00000529058 UBE2D1P51668 147 aa8.45□□□□□ -1.06
TRIM3-208ENST00000529058 C1orf137Q5JT78 98 aa8.45□□□□□ -1.06
TRIM3-208ENST00000529058 PMCHL2Q9BQD1 86 aa8.45□□□□□ -1.06
TRIM3-208ENST00000529058 MRPL35Q9NZE8 188 aaKnown RBP8.45□□□□□ -1.06
TRIM3-208ENST00000529058 IGLV4-69A0A075B6H9 119 aa8.44□□□□□ -1.06
TRIM3-208ENST00000529058 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
TRIM3-208ENST00000529058 TSTD3H0UI37 97 aa8.44□□□□□ -1.06
TRIM3-208ENST00000529058 SCGB1D1O95968 90 aa8.44□□□□□ -1.06
TRIM3-208ENST00000529058 MUC17Q685J3 4493 aa8.44□□□□□ -1.06
TRIM3-208ENST00000529058 DPM2O94777 84 aa8.43□□□□□ -1.06
TRIM3-208ENST00000529058 IGLC3P0DOY3 106 aa8.43□□□□□ -1.06
TRIM3-208ENST00000529058 PLNP26678 52 aa8.43□□□□□ -1.06
TRIM3-208ENST00000529058 SS18Q15532 418 aa8.43□□□□□ -1.06
TRIM3-208ENST00000529058 TINCRA0A1B0GVN0 87 aa8.42□□□□□ -1.06
TRIM3-208ENST00000529058 H0Y9J4 135 aa8.42□□□□□ -1.06
TRIM3-208ENST00000529058 IGKCP01834 107 aa8.42□□□□□ -1.06
TRIM3-208ENST00000529058 PTTG1IPP53801 180 aa8.42□□□□□ -1.06
TRIM3-208ENST00000529058 SEC11AP67812 179 aa8.42□□□□□ -1.06
TRIM3-208ENST00000529058 JOSD1Q15040 202 aaPredicted RBP8.42□□□□□ -1.06
TRIM3-208ENST00000529058 CARD19Q96LW7 228 aa8.42□□□□□ -1.06
TRIM3-208ENST00000529058 GEMIN7Q9H840 131 aaKnown RBP8.42□□□□□ -1.06
TRIM3-208ENST00000529058 A0A1W2PNN7 141 aa8.41□□□□□ -1.06
TRIM3-208ENST00000529058 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
TRIM3-208ENST00000529058 CCL25O15444 150 aa8.41□□□□□ -1.06
TRIM3-208ENST00000529058 IGLV7-43P04211 117 aa8.41□□□□□ -1.06
TRIM3-208ENST00000529058 XCL1P47992 114 aa8.41□□□□□ -1.06
TRIM3-208ENST00000529058 HERVK_113P63121 156 aa8.41□□□□□ -1.06
TRIM3-208ENST00000529058 LINC00242Q5T6M2 205 aa8.41□□□□□ -1.06
TRIM3-208ENST00000529058 FAM19A3Q7Z5A8 133 aa8.41□□□□□ -1.06
TRIM3-208ENST00000529058 CHCHD10Q8WYQ3 142 aaPredicted RBP8.41□□□□□ -1.06
TRIM3-208ENST00000529058 KRTAP1-4P0C5Y4 121 aa8.4□□□□□ -1.06
TRIM3-208ENST00000529058 PYY3Q5JQD4 70 aa8.4□□□□□ -1.06
TRIM3-208ENST00000529058 ATOH7Q8N100 152 aa8.4□□□□□ -1.06
TRIM3-208ENST00000529058 LINC00469Q8N7U9 141 aa8.4□□□□□ -1.06
TRIM3-208ENST00000529058 ZNF22P17026 224 aaPredicted RBP8.39□□□□□ -1.07
TRIM3-208ENST00000529058 RPL13AP40429 203 aaKnown RBP8.39□□□□□ -1.07
TRIM3-208ENST00000529058 GAGE2BQ13066 116 aa8.39□□□□□ -1.07
TRIM3-208ENST00000529058 LINC00526Q96FQ7 95 aa8.39□□□□□ -1.07
TRIM3-208ENST00000529058 LBHQ53QV2 105 aaPredicted RBP8.38□□□□□ -1.07
TRIM3-208ENST00000529058 TMEM170BQ5T4T1 132 aa8.38□□□□□ -1.07
TRIM3-208ENST00000529058 IGLV5-45A0A087WSX0 123 aa8.37□□□□□ -1.07
TRIM3-208ENST00000529058 H3BRM9 83 aa8.37□□□□□ -1.07
TRIM3-208ENST00000529058 CD164L2Q6UWJ8 174 aa8.37□□□□□ -1.07
TRIM3-208ENST00000529058 CDKN2A-AS1Q9UH64 79 aa8.37□□□□□ -1.07
TRIM3-208ENST00000529058 IGHV3OR16-9A0A0B4J2B5 98 aa8.36□□□□□ -1.07
TRIM3-208ENST00000529058 LOC107984640A0A0U1RRK4 108 aa8.36□□□□□ -1.07
TRIM3-208ENST00000529058 TSPAN13O95857 204 aa8.36□□□□□ -1.07
TRIM3-208ENST00000529058 SYCNQ0VAF6 134 aa8.36□□□□□ -1.07
TRIM3-208ENST00000529058 FOXI1Q12951 378 aa8.36□□□□□ -1.07
TRIM3-208ENST00000529058 C9orf116Q5BN46 136 aaPredicted RBP8.36□□□□□ -1.07
TRIM3-208ENST00000529058 PHF5AQ7RTV0 110 aaKnown RBP8.36□□□□□ -1.07
TRIM3-208ENST00000529058 LINC00587B1AMM8 73 aa8.35□□□□□ -1.07
TRIM3-208ENST00000529058 HSBP1L1C9JCN9 74 aa8.35□□□□□ -1.07
TRIM3-208ENST00000529058 COX7A2LO14548 114 aa8.35□□□□□ -1.07
TRIM3-208ENST00000529058 HERVK_113P61574 105 aa8.35□□□□□ -1.07
TRIM3-208ENST00000529058 C5orf38Q86SI9 138 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms