RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 NXT2Q9NPJ8 142 aaKnown RBP4.39□□□□□ -1.71
ITGB1-218ENST00000528877 IGLV5-39A0A0G2JS06 123 aa4.38□□□□□ -1.71
ITGB1-218ENST00000528877 PRYO14603 147 aa4.38□□□□□ -1.71
ITGB1-218ENST00000528877 NDUFA1O15239 70 aa4.38□□□□□ -1.71
ITGB1-218ENST00000528877 UBE2D1P51668 147 aa4.38□□□□□ -1.71
ITGB1-218ENST00000528877 C2orf66Q6UXQ4 117 aa4.38□□□□□ -1.71
ITGB1-218ENST00000528877 TEX43Q6ZNM6 134 aa4.38□□□□□ -1.71
ITGB1-218ENST00000528877 ORAOV1Q8WV07 137 aa4.38□□□□□ -1.71
ITGB1-218ENST00000528877 AMELXQ99217 191 aa4.38□□□□□ -1.71
ITGB1-218ENST00000528877 C2orf88Q9BSF0 95 aa4.38□□□□□ -1.71
ITGB1-218ENST00000528877 SEC11CQ9BY50 192 aa4.38□□□□□ -1.71
ITGB1-218ENST00000528877 CYSLTR1Q9Y271 337 aa4.38□□□□□ -1.71
ITGB1-218ENST00000528877 LINC01546A6NGU7 62 aa4.37□□□□□ -1.71
ITGB1-218ENST00000528877 IGIPA6NJ69 53 aa4.37□□□□□ -1.71
ITGB1-218ENST00000528877 KIAA0087Q14695 138 aa4.37□□□□□ -1.71
ITGB1-218ENST00000528877 Q6ZN92 141 aa4.37□□□□□ -1.71
ITGB1-218ENST00000528877 Q6ZRP5 223 aa4.37□□□□□ -1.71
ITGB1-218ENST00000528877 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
ITGB1-218ENST00000528877 TRBV30A0A0K0K1B3 111 aa4.36□□□□□ -1.71
ITGB1-218ENST00000528877 LINC01549A6NIU2 74 aa4.36□□□□□ -1.71
ITGB1-218ENST00000528877 G0S2P27469 103 aa4.36□□□□□ -1.71
ITGB1-218ENST00000528877 RPL18AQ02543 176 aaKnown RBP4.36□□□□□ -1.71
ITGB1-218ENST00000528877 PAPPA-AS1Q5QFB9 102 aa4.36□□□□□ -1.71
ITGB1-218ENST00000528877 C10orf91Q5T1B1 145 aa4.36□□□□□ -1.71
ITGB1-218ENST00000528877 SPINK6Q6UWN8 80 aa4.36□□□□□ -1.71
ITGB1-218ENST00000528877 TOMM6Q96B49 74 aa4.36□□□□□ -1.71
ITGB1-218ENST00000528877 LINC01600Q96MT4 127 aa4.36□□□□□ -1.71
ITGB1-218ENST00000528877 GNB1LQ9BYB4 327 aa4.36□□□□□ -1.71
ITGB1-218ENST00000528877 C6orf48Q9UBA6 75 aa4.36□□□□□ -1.71
ITGB1-218ENST00000528877 IGKV2D-30A0A075B6S6 120 aa4.35□□□□□ -1.71
ITGB1-218ENST00000528877 LOC389332A0A1B0GUA5 103 aa4.35□□□□□ -1.71
ITGB1-218ENST00000528877 A0A1W2PNN7 141 aa4.35□□□□□ -1.71
ITGB1-218ENST00000528877 MT-ND6P03923 174 aa4.35□□□□□ -1.71
ITGB1-218ENST00000528877 SEC11AP67812 179 aa4.35□□□□□ -1.71
ITGB1-218ENST00000528877 GAGE2BQ13066 116 aa4.35□□□□□ -1.71
ITGB1-218ENST00000528877 SRSF9Q13242 221 aaKnown RBP eCLIP4.35□□□□□ -1.71
ITGB1-218ENST00000528877 RHEBQ15382 184 aa4.35□□□□□ -1.71
ITGB1-218ENST00000528877 COX19Q49B96 90 aa4.35□□□□□ -1.71
ITGB1-218ENST00000528877 C9orf116Q5BN46 136 aaPredicted RBP4.35□□□□□ -1.71
ITGB1-218ENST00000528877 CARHSP1Q9Y2V2 147 aaKnown RBP4.35□□□□□ -1.71
ITGB1-218ENST00000528877 A0A0J9YXV3 536 aa4.34□□□□□ -1.71
ITGB1-218ENST00000528877 NDUFC2-KCTD14E9PQ53 114 aa4.34□□□□□ -1.71
ITGB1-218ENST00000528877 S100PP25815 95 aa4.34□□□□□ -1.71
ITGB1-218ENST00000528877 HERVK_113P63121 156 aa4.34□□□□□ -1.71
ITGB1-218ENST00000528877 REG3GQ6UW15 175 aa4.34□□□□□ -1.71
ITGB1-218ENST00000528877 UNQ6190/PRO20217Q6UXQ8 127 aa4.34□□□□□ -1.71
ITGB1-218ENST00000528877 ERASQ7Z444 233 aa4.34□□□□□ -1.71
ITGB1-218ENST00000528877 COMMD7Q86VX2 200 aa4.34□□□□□ -1.71
ITGB1-218ENST00000528877 Q8IZM0 81 aa4.34□□□□□ -1.71
ITGB1-218ENST00000528877 VCX2Q9H322 139 aa4.34□□□□□ -1.71
ITGB1-218ENST00000528877 IGLV5-45A0A087WSX0 123 aa4.33□□□□□ -1.72
ITGB1-218ENST00000528877 ALKBH7Q9BT30 221 aaPredicted RBP4.33□□□□□ -1.72
ITGB1-218ENST00000528877 PSORS1C2Q9UIG4 136 aa4.33□□□□□ -1.72
ITGB1-218ENST00000528877 LRP2P98164 4655 aa4.32□□□□□ -1.72
ITGB1-218ENST00000528877 TINCRA0A1B0GVN0 87 aa4.32□□□□□ -1.72
ITGB1-218ENST00000528877 CXCL5P42830 114 aa4.32□□□□□ -1.72
ITGB1-218ENST00000528877 ZC2HC1BQ5TFG8 222 aa4.32□□□□□ -1.72
ITGB1-218ENST00000528877 C2orf82Q6UX34 121 aa4.32□□□□□ -1.72
ITGB1-218ENST00000528877 KRTAP7-1Q8IUC3 87 aa4.32□□□□□ -1.72
ITGB1-218ENST00000528877 PACRGQ96M98 296 aaPredicted RBP4.32□□□□□ -1.72
ITGB1-218ENST00000528877 CDKN2A-AS1Q9UH64 79 aa4.32□□□□□ -1.72
ITGB1-218ENST00000528877 FAM168BA1KXE4 195 aa4.31□□□□□ -1.72
ITGB1-218ENST00000528877 SMIM1B2RUZ4 78 aa4.31□□□□□ -1.72
ITGB1-218ENST00000528877 F8VRH5 84 aa4.31□□□□□ -1.72
ITGB1-218ENST00000528877 PRSS2P07478 247 aa4.31□□□□□ -1.72
ITGB1-218ENST00000528877 KRTAP10-8P60410 259 aa4.31□□□□□ -1.72
ITGB1-218ENST00000528877 KIAA1644Q3SXP7 199 aa4.31□□□□□ -1.72
ITGB1-218ENST00000528877 C9orf129Q5T035 196 aaKnown RBP4.31□□□□□ -1.72
ITGB1-218ENST00000528877 PHF5AQ7RTV0 110 aaKnown RBP4.31□□□□□ -1.72
ITGB1-218ENST00000528877 SCGB3A1Q96QR1 104 aa4.31□□□□□ -1.72
ITGB1-218ENST00000528877 M0QXV9 152 aa4.3□□□□□ -1.72
ITGB1-218ENST00000528877 IGLV7-43P04211 117 aa4.3□□□□□ -1.72
ITGB1-218ENST00000528877 CKS1BP61024 79 aa4.3□□□□□ -1.72
ITGB1-218ENST00000528877 PDZD11Q5EBL8 140 aa4.3□□□□□ -1.72
ITGB1-218ENST00000528877 FAM19A5Q7Z5A7 132 aaPredicted RBP4.3□□□□□ -1.72
ITGB1-218ENST00000528877 CST9LQ9H4G1 147 aa4.3□□□□□ -1.72
ITGB1-218ENST00000528877 GEMIN7Q9H840 131 aaKnown RBP4.3□□□□□ -1.72
ITGB1-218ENST00000528877 A0A096LNJ9 63 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 PMVKQ15126 192 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 GAGE2EQ4V326 116 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 C6orf226Q5I0X4 101 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 C1orf137Q5JT78 98 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 FA2HQ7L5A8 372 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 KRTAP11-1Q8IUC1 163 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 LINC00469Q8N7U9 141 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 DIRC1Q969H9 104 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 RPS10P5Q9NQ39 176 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 GAGE2DQ9UEU5 116 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 TP73-AS1Q9UF72 201 aa4.29□□□□□ -1.72
ITGB1-218ENST00000528877 H0Y9J4 135 aa4.28□□□□□ -1.72
ITGB1-218ENST00000528877 IGLC3P0DOY3 106 aa4.28□□□□□ -1.72
ITGB1-218ENST00000528877 FABP9Q0Z7S8 132 aa4.28□□□□□ -1.72
ITGB1-218ENST00000528877 SVBPQ8N300 66 aa4.28□□□□□ -1.72
ITGB1-218ENST00000528877 C18orf32Q8TCD1 76 aa4.28□□□□□ -1.72
ITGB1-218ENST00000528877 SMCO4Q9NRQ5 59 aa4.28□□□□□ -1.72
ITGB1-218ENST00000528877 TOMM7Q9P0U1 55 aa4.28□□□□□ -1.72
ITGB1-218ENST00000528877 NUPR1O60356 82 aa4.27□□□□□ -1.73
ITGB1-218ENST00000528877 SNAPINO95295 136 aa4.27□□□□□ -1.73
ITGB1-218ENST00000528877 HBDP02042 147 aa4.27□□□□□ -1.73
ITGB1-218ENST00000528877 COX7B2Q8TF08 81 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms