RNA–Protein interactions for RNA: ENST00000528824.1

SNX7-204, Transcript of sorting nexin 7, humanhuman

TSL 1 (best)

Gene SNX7, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-204ENST00000528824 VCYO14598 125 aa4.48□□□□□ -1.69
SNX7-204ENST00000528824 PDE6DO43924 150 aa4.48□□□□□ -1.69
SNX7-204ENST00000528824 TSHBP01222 138 aa4.48□□□□□ -1.69
SNX7-204ENST00000528824 SEC61BP60468 96 aaKnown RBP4.48□□□□□ -1.69
SNX7-204ENST00000528824 RETNLBQ9BQ08 111 aa4.48□□□□□ -1.69
SNX7-204ENST00000528824 PPDPFQ9H3Y8 114 aa4.48□□□□□ -1.69
SNX7-204ENST00000528824 TMEM242Q9NWH2 141 aa4.48□□□□□ -1.69
SNX7-204ENST00000528824 NDUFC2-KCTD14E9PQ53 114 aa4.48□□□□□ -1.69
SNX7-204ENST00000528824 TCAPO15273 167 aa4.48□□□□□ -1.69
SNX7-204ENST00000528824 PNRC1Q12796 327 aaPredicted RBP4.48□□□□□ -1.69
SNX7-204ENST00000528824 KRTAP11-1Q8IUC1 163 aa4.48□□□□□ -1.69
SNX7-204ENST00000528824 OCC1Q8TAD7 63 aa4.48□□□□□ -1.69
SNX7-204ENST00000528824 A0A087X002 238 aa4.47□□□□□ -1.69
SNX7-204ENST00000528824 TGIF2-C20orf24A0A0A6YYL0 155 aa4.47□□□□□ -1.69
SNX7-204ENST00000528824 TRBV27A0A0K0K1C4 114 aa4.47□□□□□ -1.69
SNX7-204ENST00000528824 CFC1BP0CG36 223 aa4.47□□□□□ -1.69
SNX7-204ENST00000528824 ADIRFQ15847 76 aa4.47□□□□□ -1.69
SNX7-204ENST00000528824 FAM229BQ4G0N7 80 aa4.47□□□□□ -1.69
SNX7-204ENST00000528824 FP248Q71RG6 208 aaPredicted RBP4.47□□□□□ -1.69
SNX7-204ENST00000528824 BCE1O60756 84 aa4.46□□□□□ -1.7
SNX7-204ENST00000528824 SPAG11AQ6PDA7 123 aa4.46□□□□□ -1.7
SNX7-204ENST00000528824 UNQ6190/PRO20217Q6UXQ8 127 aa4.46□□□□□ -1.7
SNX7-204ENST00000528824 TIMM21Q9BVV7 248 aa4.46□□□□□ -1.7
SNX7-204ENST00000528824 C6orf48Q9UBA6 75 aa4.46□□□□□ -1.7
SNX7-204ENST00000528824 UBE2D4Q9Y2X8 147 aa4.46□□□□□ -1.7
SNX7-204ENST00000528824 MT-ND4LP03901 98 aa4.45□□□□□ -1.7
SNX7-204ENST00000528824 RAB5AP20339 215 aa4.45□□□□□ -1.7
SNX7-204ENST00000528824 POLR2KP53803 58 aaKnown RBP4.45□□□□□ -1.7
SNX7-204ENST00000528824 ASB16-AS1Q495Z4 193 aa4.45□□□□□ -1.7
SNX7-204ENST00000528824 TRBV24-1A0A075B6N3 115 aa4.44□□□□□ -1.7
SNX7-204ENST00000528824 PPP1R2P9O14990 202 aa4.44□□□□□ -1.7
SNX7-204ENST00000528824 TP73-AS1Q9UF72 201 aa4.44□□□□□ -1.7
SNX7-204ENST00000528824 C22orf24Q9Y442 160 aa4.44□□□□□ -1.7
SNX7-204ENST00000528824 V9GYV3 84 aa4.44□□□□□ -1.7
SNX7-204ENST00000528824 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
SNX7-204ENST00000528824 IGHV3OR16-9A0A0B4J2B5 98 aa4.44□□□□□ -1.7
SNX7-204ENST00000528824 A8MWL6 223 aa4.44□□□□□ -1.7
SNX7-204ENST00000528824 PRSS2P07478 247 aa4.44□□□□□ -1.7
SNX7-204ENST00000528824 HBBP68871 147 aa4.44□□□□□ -1.7
SNX7-204ENST00000528824 RNASE13Q5GAN3 156 aaKnown RBP4.44□□□□□ -1.7
SNX7-204ENST00000528824 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
SNX7-204ENST00000528824 UBE2AP49459 152 aa4.43□□□□□ -1.7
SNX7-204ENST00000528824 CKS1BP61024 79 aa4.43□□□□□ -1.7
SNX7-204ENST00000528824 C10orf25Q5T742 122 aa4.43□□□□□ -1.7
SNX7-204ENST00000528824 MRPL55Q7Z7F7 128 aaKnown RBP4.43□□□□□ -1.7
SNX7-204ENST00000528824 TMEM191AQ9H0A3 160 aa4.43□□□□□ -1.7
SNX7-204ENST00000528824 RNASE7Q9H1E1 156 aaKnown RBP4.43□□□□□ -1.7
SNX7-204ENST00000528824 SPANXA1Q9NS26 97 aa4.43□□□□□ -1.7
SNX7-204ENST00000528824 NDUFA12Q9UI09 145 aa4.43□□□□□ -1.7
SNX7-204ENST00000528824 IFITM10A6NMD0 228 aa4.42□□□□□ -1.7
SNX7-204ENST00000528824 GATCO43716 136 aaKnown RBP4.42□□□□□ -1.7
SNX7-204ENST00000528824 C9orf129Q5T035 196 aaKnown RBP4.42□□□□□ -1.7
SNX7-204ENST00000528824 Q6ZUT4 128 aa4.42□□□□□ -1.7
SNX7-204ENST00000528824 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
SNX7-204ENST00000528824 OSTCQ9NRP0 149 aa4.42□□□□□ -1.7
SNX7-204ENST00000528824 PAM16Q9Y3D7 125 aa4.42□□□□□ -1.7
SNX7-204ENST00000528824 FOXA3P55318 350 aaPredicted RBP4.41□□□□□ -1.7
SNX7-204ENST00000528824 FAM231DQ6ZW35 169 aa4.41□□□□□ -1.7
SNX7-204ENST00000528824 KRTAP7-1Q8IUC3 87 aa4.41□□□□□ -1.7
SNX7-204ENST00000528824 LINC01561Q8N1V8 128 aa4.41□□□□□ -1.7
SNX7-204ENST00000528824 A0A1B0GUT8 65 aa4.4□□□□□ -1.7
SNX7-204ENST00000528824 SMIM27A0A1W2PRY6 76 aa4.4□□□□□ -1.7
SNX7-204ENST00000528824 C5orf52A6NGY3 159 aa4.4□□□□□ -1.7
SNX7-204ENST00000528824 TRGC2P03986 189 aa4.4□□□□□ -1.7
SNX7-204ENST00000528824 MRPS36P82909 103 aaKnown RBP4.4□□□□□ -1.7
SNX7-204ENST00000528824 LINC00242Q5T6M2 205 aa4.4□□□□□ -1.7
SNX7-204ENST00000528824 HIST1H2BKO60814 126 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 HIST1H2BJP06899 126 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 RAB4AP20338 218 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 HIST1H2BOP23527 126 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 HIST1H2BBP33778 126 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 HIST1H2BDP58876 126 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 HIST1H2BCP62807 126 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 HIST2H2BEQ16778 126 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 KRTAP13-2Q52LG2 175 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 C6orf226Q5I0X4 101 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.4□□□□□ -1.71
SNX7-204ENST00000528824 HIST1H2BHQ93079 126 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 HIST1H2BNQ99877 126 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 HIST1H2BMQ99879 126 aa4.4□□□□□ -1.71
SNX7-204ENST00000528824 IFI27P40305 119 aaPredicted RBP4.39□□□□□ -1.71
SNX7-204ENST00000528824 RAB5BP61020 215 aa4.39□□□□□ -1.71
SNX7-204ENST00000528824 SNRPEP62304 92 aaKnown RBP4.39□□□□□ -1.71
SNX7-204ENST00000528824 KIAA0087Q14695 138 aa4.39□□□□□ -1.71
SNX7-204ENST00000528824 Q6ZN92 141 aa4.39□□□□□ -1.71
SNX7-204ENST00000528824 DAND5Q8N907 189 aa4.39□□□□□ -1.71
SNX7-204ENST00000528824 C20orf78Q9BR46 151 aa4.39□□□□□ -1.71
SNX7-204ENST00000528824 ANAPC11Q9NYG5 84 aa4.39□□□□□ -1.71
SNX7-204ENST00000528824 RIGQ13278 110 aa4.38□□□□□ -1.71
SNX7-204ENST00000528824 C2orf82Q6UX34 121 aa4.38□□□□□ -1.71
SNX7-204ENST00000528824 AMN1Q8IY45 258 aa4.38□□□□□ -1.71
SNX7-204ENST00000528824 NKAPP1Q8N9T2 125 aa4.38□□□□□ -1.71
SNX7-204ENST00000528824 C2orf88Q9BSF0 95 aa4.38□□□□□ -1.71
SNX7-204ENST00000528824 TRAV9-1A0A075B6T8 112 aa4.37□□□□□ -1.71
SNX7-204ENST00000528824 A0A1B0GXF2 115 aa4.37□□□□□ -1.71
SNX7-204ENST00000528824 S100PP25815 95 aa4.37□□□□□ -1.71
SNX7-204ENST00000528824 TMEM136Q6ZRR5 245 aa4.37□□□□□ -1.71
SNX7-204ENST00000528824 FAM19A2Q8N3H0 131 aa4.37□□□□□ -1.71
SNX7-204ENST00000528824 LINC00469Q8N7U9 141 aa4.37□□□□□ -1.71
SNX7-204ENST00000528824 GNB1LQ9BYB4 327 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms