RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 CXCL5P42830 114 aa7.08□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 CKS1BP61024 79 aa7.08□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 RPL18AQ02543 176 aaKnown RBP7.08□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 PMCHL1Q16048 86 aa7.08□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 BAGE3Q86Y29 109 aa7.08□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 C7orf33Q8WU49 177 aa7.08□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 SMIM1B2RUZ4 78 aa7.07□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 H3BRM9 83 aa7.07□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 HSBP1O75506 76 aa7.07□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 NDUFA6P56556 154 aa7.07□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 C2orf82Q6UX34 121 aa7.07□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 TOMM7Q9P0U1 55 aa7.07□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 NDUFC2-KCTD14E9PQ53 114 aa7.06□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 Q6ZRP5 223 aa7.06□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 F8VRH5 84 aa7.05□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 COX7B2Q8TF08 81 aa7.05□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 IFI27L1Q96BM0 104 aa7.05□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 TRAV12-1A0A0B4J245 112 aa7.04□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 A0A1W2PNN7 141 aa7.04□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 C9orf116Q5BN46 136 aaPredicted RBP7.04□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 IGLV5-39A0A0G2JS06 123 aa7.03□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 SERF1AO75920 110 aa7.03□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 SPINK8P0C7L1 97 aa7.03□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 ZNF22P17026 224 aaPredicted RBP7.03□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 GAGE2EQ4V326 116 aa7.03□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 GAGE2DQ9UEU5 116 aa7.03□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 CHTOPQ9Y3Y2 248 aaKnown RBP7.03□□□□□ -1.28
TMX2-CTNND1-201ENST00000528395 FAM19A2Q8N3H0 131 aa7.02□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 PKHD1L1Q86WI1 4243 aa7.02□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 LRP1Q07954 4544 aaKnown RBP7.01□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 C11orf86A6NJI1 115 aa7.01□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 SCO1O75880 301 aa7.01□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 LEPROTL1O95214 131 aa7.01□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 LINC00310P59036 64 aa7.01□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 KRTAP29-1A8MX34 341 aaPredicted RBP7□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 PRR3P79522 188 aaKnown RBP7□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 ODF1Q14990 250 aa7□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 TMEM170BQ5T4T1 132 aa7□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 SFTA2Q6UW10 78 aa7□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 FAT3Q8TDW7 4589 aa7□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HERC1Q15751 4861 aa6.99□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 OXTP01178 125 aa6.99□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HNRNPA3P51991 378 aaKnown RBP6.99□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 C9orf129Q5T035 196 aaKnown RBP6.99□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HSPB8Q9UJY1 196 aa6.99□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 NUPR1O60356 82 aa6.98□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 TMEM223A0PJW6 202 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HIST1H2BKO60814 126 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HIST1H2BJP06899 126 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HIST1H2BOP23527 126 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HIST1H2BBP33778 126 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HIST1H2BDP58876 126 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HIST1H2BCP62807 126 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HIST2H2BEQ16778 126 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 PHF5AQ7RTV0 110 aaKnown RBP6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 FAM19A5Q7Z5A7 132 aaPredicted RBP6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 KRTAP7-1Q8IUC3 87 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HIST1H2BHQ93079 126 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HIST1H2BNQ99877 126 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 HIST1H2BMQ99879 126 aa6.97□□□□□ -1.29
TMX2-CTNND1-201ENST00000528395 COX17Q14061 63 aa6.96□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 XAGE1AQ9HD64 81 aa6.96□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 J3QL48 77 aa6.95□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 M0QXV9 152 aa6.95□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 FABP4P15090 132 aa6.95□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 S100A1P23297 94 aa6.95□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 PLNP26678 52 aa6.95□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 SPINK6Q6UWN8 80 aa6.95□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 TP73-AS1Q9UF72 201 aa6.95□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 PLA2G2DQ9UNK4 145 aa6.95□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 SRSF9Q13242 221 aaKnown RBP eCLIP6.94□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 LBHQ53QV2 105 aaPredicted RBP6.94□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 ZNF625Q96I27 306 aaPredicted RBP6.94□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 MAP1LC3CQ9BXW4 147 aa6.94□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 ERG28Q9UKR5 140 aa6.94□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 H0Y8G0 127 aa6.93□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 SERTAD4-AS1Q5TG53 156 aa6.93□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 C22orf24Q9Y442 160 aa6.93□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 DPM2O94777 84 aa6.92□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 PFN2P35080 140 aa6.92□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 UBE2BP63146 152 aa6.92□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 C1orf137Q5JT78 98 aa6.92□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 COA6Q5JTJ3 125 aaKnown RBP6.92□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 IGLV5-37A0A075B6J1 123 aa6.9□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 LINC00587B1AMM8 73 aa6.9□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 IGKCP01834 107 aa6.9□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 IGLV7-43P04211 117 aa6.9□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 HERV-K104P63124 156 aa6.9□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 REG3GQ6UW15 175 aa6.9□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 MRPL55Q7Z7F7 128 aaKnown RBP6.9□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 KRTAP11-1Q8IUC1 163 aa6.9□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 PLEKHB2Q96CS7 222 aa6.9□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 SND1-IT1Q9HBX3 110 aa6.9□□□□□ -1.3
TMX2-CTNND1-201ENST00000528395 SYS1-DBNDD2H3BUS1 97 aa6.89□□□□□ -1.31
TMX2-CTNND1-201ENST00000528395 LEPROTO15243 131 aa6.89□□□□□ -1.31
TMX2-CTNND1-201ENST00000528395 HERVK_113P61574 105 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms