RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 C6orf226Q5I0X4 101 aa9.09□□□□□ -0.95
NXF1-204ENST00000527064 C10orf25Q5T742 122 aa9.09□□□□□ -0.95
NXF1-204ENST00000527064 BAGE3Q86Y29 109 aa9.09□□□□□ -0.95
NXF1-204ENST00000527064 C6orf48Q9UBA6 75 aa9.09□□□□□ -0.95
NXF1-204ENST00000527064 IGLC3P0DOY3 106 aa9.08□□□□□ -0.96
NXF1-204ENST00000527064 CXCL5P42830 114 aa9.08□□□□□ -0.96
NXF1-204ENST00000527064 KRTAP10-4P60372 401 aaPredicted RBP9.08□□□□□ -0.96
NXF1-204ENST00000527064 C2orf82Q6UX34 121 aa9.08□□□□□ -0.96
NXF1-204ENST00000527064 SMIM1B2RUZ4 78 aa9.07□□□□□ -0.96
NXF1-204ENST00000527064 HSBP1O75506 76 aa9.07□□□□□ -0.96
NXF1-204ENST00000527064 COLCA2A8K830 154 aa9.06□□□□□ -0.96
NXF1-204ENST00000527064 NDUFC2-KCTD14E9PQ53 114 aa9.05□□□□□ -0.96
NXF1-204ENST00000527064 F8VRH5 84 aa9.05□□□□□ -0.96
NXF1-204ENST00000527064 Q6ZRP5 223 aa9.05□□□□□ -0.96
NXF1-204ENST00000527064 COX7B2Q8TF08 81 aa9.05□□□□□ -0.96
NXF1-204ENST00000527064 SPINK8P0C7L1 97 aa9.04□□□□□ -0.96
NXF1-204ENST00000527064 IFI27L1Q96BM0 104 aa9.04□□□□□ -0.96
NXF1-204ENST00000527064 GAGE2EQ4V326 116 aa9.03□□□□□ -0.96
NXF1-204ENST00000527064 C9orf116Q5BN46 136 aaPredicted RBP9.03□□□□□ -0.96
NXF1-204ENST00000527064 GAGE2DQ9UEU5 116 aa9.03□□□□□ -0.96
NXF1-204ENST00000527064 TRAV12-1A0A0B4J245 112 aa9.02□□□□□ -0.97
NXF1-204ENST00000527064 A0A1W2PNN7 141 aa9.02□□□□□ -0.97
NXF1-204ENST00000527064 ZNF22P17026 224 aaPredicted RBP9.02□□□□□ -0.97
NXF1-204ENST00000527064 CHTOPQ9Y3Y2 248 aaKnown RBP9.02□□□□□ -0.97
NXF1-204ENST00000527064 SERF1AO75920 110 aa9.01□□□□□ -0.97
NXF1-204ENST00000527064 PRR3P79522 188 aaKnown RBP9.01□□□□□ -0.97
NXF1-204ENST00000527064 SCO1O75880 301 aa9□□□□□ -0.97
NXF1-204ENST00000527064 TMEM170BQ5T4T1 132 aa9□□□□□ -0.97
NXF1-204ENST00000527064 FAM19A2Q8N3H0 131 aa9□□□□□ -0.97
NXF1-204ENST00000527064 MYCBP2O75592 4640 aa8.99□□□□□ -0.97
NXF1-204ENST00000527064 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
NXF1-204ENST00000527064 C11orf86A6NJI1 115 aa8.99□□□□□ -0.97
NXF1-204ENST00000527064 LEPROTL1O95214 131 aa8.99□□□□□ -0.97
NXF1-204ENST00000527064 LINC00310P59036 64 aa8.98□□□□□ -0.97
NXF1-204ENST00000527064 SFTA2Q6UW10 78 aa8.98□□□□□ -0.97
NXF1-204ENST00000527064 FAM19A5Q7Z5A7 132 aaPredicted RBP8.98□□□□□ -0.97
NXF1-204ENST00000527064 HSPB8Q9UJY1 196 aa8.98□□□□□ -0.97
NXF1-204ENST00000527064 FAM168BA1KXE4 195 aa8.97□□□□□ -0.97
NXF1-204ENST00000527064 KRTAP29-1A8MX34 341 aaPredicted RBP8.97□□□□□ -0.97
NXF1-204ENST00000527064 HNRNPA3P51991 378 aaKnown RBP8.97□□□□□ -0.97
NXF1-204ENST00000527064 J3QL48 77 aa8.96□□□□□ -0.98
NXF1-204ENST00000527064 C9orf129Q5T035 196 aaKnown RBP8.96□□□□□ -0.98
NXF1-204ENST00000527064 PHF5AQ7RTV0 110 aaKnown RBP8.96□□□□□ -0.98
NXF1-204ENST00000527064 FLG2Q5D862 2391 aaPredicted RBP8.96□□□□□ -0.98
NXF1-204ENST00000527064 M0QXV9 152 aa8.95□□□□□ -0.98
NXF1-204ENST00000527064 OXTP01178 125 aa8.95□□□□□ -0.98
NXF1-204ENST00000527064 H0Y8G0 127 aa8.94□□□□□ -0.98
NXF1-204ENST00000527064 TMEM223A0PJW6 202 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 HIST1H2BKO60814 126 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 HIST1H2BJP06899 126 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 HIST1H2BOP23527 126 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 HIST1H2BBP33778 126 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 HIST1H2BDP58876 126 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 HIST1H2BCP62807 126 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 ODF1Q14990 250 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 HIST2H2BEQ16778 126 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.93□□□□□ -0.98
NXF1-204ENST00000527064 HIST1H2BHQ93079 126 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 HIST1H2BNQ99877 126 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 HIST1H2BMQ99879 126 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 XAGE1AQ9HD64 81 aa8.93□□□□□ -0.98
NXF1-204ENST00000527064 NUPR1O60356 82 aa8.92□□□□□ -0.98
NXF1-204ENST00000527064 FABP4P15090 132 aa8.92□□□□□ -0.98
NXF1-204ENST00000527064 PLNP26678 52 aa8.92□□□□□ -0.98
NXF1-204ENST00000527064 UBE2BP63146 152 aa8.92□□□□□ -0.98
NXF1-204ENST00000527064 PSORS1C2Q9UIG4 136 aa8.92□□□□□ -0.98
NXF1-204ENST00000527064 COX17Q14061 63 aa8.91□□□□□ -0.98
NXF1-204ENST00000527064 SPINK6Q6UWN8 80 aa8.91□□□□□ -0.98
NXF1-204ENST00000527064 PKHD1L1Q86WI1 4243 aa8.91□□□□□ -0.98
NXF1-204ENST00000527064 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
NXF1-204ENST00000527064 LBHQ53QV2 105 aaPredicted RBP8.9□□□□□ -0.98
NXF1-204ENST00000527064 C1orf137Q5JT78 98 aa8.9□□□□□ -0.98
NXF1-204ENST00000527064 KRTAP7-1Q8IUC3 87 aa8.9□□□□□ -0.98
NXF1-204ENST00000527064 MAP1LC3CQ9BXW4 147 aa8.9□□□□□ -0.98
NXF1-204ENST00000527064 ERG28Q9UKR5 140 aa8.9□□□□□ -0.98
NXF1-204ENST00000527064 S100A1P23297 94 aa8.89□□□□□ -0.99
NXF1-204ENST00000527064 PFN2P35080 140 aa8.89□□□□□ -0.99
NXF1-204ENST00000527064 SERTAD4-AS1Q5TG53 156 aa8.89□□□□□ -0.99
NXF1-204ENST00000527064 ZNF625Q96I27 306 aaPredicted RBP8.89□□□□□ -0.99
NXF1-204ENST00000527064 TP73-AS1Q9UF72 201 aa8.89□□□□□ -0.99
NXF1-204ENST00000527064 DPM2O94777 84 aa8.88□□□□□ -0.99
NXF1-204ENST00000527064 PLA2G2DQ9UNK4 145 aa8.88□□□□□ -0.99
NXF1-204ENST00000527064 C22orf24Q9Y442 160 aa8.88□□□□□ -0.99
NXF1-204ENST00000527064 HERVK_113P61574 105 aa8.87□□□□□ -0.99
NXF1-204ENST00000527064 REG3GQ6UW15 175 aa8.87□□□□□ -0.99
NXF1-204ENST00000527064 IGKCP01834 107 aa8.86□□□□□ -0.99
NXF1-204ENST00000527064 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
NXF1-204ENST00000527064 NKAPP1Q8N9T2 125 aa8.86□□□□□ -0.99
NXF1-204ENST00000527064 HERV-K104P63124 156 aa8.85□□□□□ -0.99
NXF1-204ENST00000527064 SRSF9Q13242 221 aaKnown RBP eCLIP8.85□□□□□ -0.99
NXF1-204ENST00000527064 LRP1Q07954 4544 aaKnown RBP8.84□□□□□ -0.99
NXF1-204ENST00000527064 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
NXF1-204ENST00000527064 LINC00587B1AMM8 73 aa8.84□□□□□ -0.99
NXF1-204ENST00000527064 IGLV7-43P04211 117 aa8.84□□□□□ -0.99
NXF1-204ENST00000527064 COA6Q5JTJ3 125 aaKnown RBP8.84□□□□□ -0.99
NXF1-204ENST00000527064 PLEKHB2Q96CS7 222 aa8.84□□□□□ -0.99
NXF1-204ENST00000527064 SND1-IT1Q9HBX3 110 aa8.84□□□□□ -0.99
NXF1-204ENST00000527064 NDUFA12Q9UI09 145 aa8.84□□□□□ -0.99
NXF1-204ENST00000527064 FAT3Q8TDW7 4589 aa8.84□□□□□ -0.99
NXF1-204ENST00000527064 MYMXA0A1B0GTQ4 84 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms