RNA–Protein interactions for RNA: ENST00000526080.1

PTPRU-209, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 424 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-209ENST00000526080 FP248Q71RG6 208 aaPredicted RBP7.84□□□□□ -1.15
PTPRU-209ENST00000526080 FAM19A3Q7Z5A8 133 aa7.84□□□□□ -1.15
PTPRU-209ENST00000526080 AMELXQ99217 191 aa7.84□□□□□ -1.15
PTPRU-209ENST00000526080 UBE2AP49459 152 aa7.83□□□□□ -1.16
PTPRU-209ENST00000526080 GAGE10A6NGK3 116 aa7.82□□□□□ -1.16
PTPRU-209ENST00000526080 PNRC1Q12796 327 aaPredicted RBP7.82□□□□□ -1.16
PTPRU-209ENST00000526080 LCE2CQ5TA81 110 aa7.82□□□□□ -1.16
PTPRU-209ENST00000526080 C2orf88Q9BSF0 95 aa7.82□□□□□ -1.16
PTPRU-209ENST00000526080 ALKBH7Q9BT30 221 aaPredicted RBP7.82□□□□□ -1.16
PTPRU-209ENST00000526080 A0A1B0GXF2 115 aa7.81□□□□□ -1.16
PTPRU-209ENST00000526080 BLOC1S1P78537 153 aa7.81□□□□□ -1.16
PTPRU-209ENST00000526080 C3orf22Q8N5N4 141 aa7.81□□□□□ -1.16
PTPRU-209ENST00000526080 PPBPP02775 128 aa7.8□□□□□ -1.16
PTPRU-209ENST00000526080 SRP19P09132 144 aaKnown RBP7.8□□□□□ -1.16
PTPRU-209ENST00000526080 RAB5AP20339 215 aa7.8□□□□□ -1.16
PTPRU-209ENST00000526080 RPL23P62829 140 aaKnown RBP7.8□□□□□ -1.16
PTPRU-209ENST00000526080 CXCL5P42830 114 aa7.79□□□□□ -1.16
PTPRU-209ENST00000526080 C2orf66Q6UXQ4 117 aa7.79□□□□□ -1.16
PTPRU-209ENST00000526080 TCTE3Q8IZS6 198 aa7.79□□□□□ -1.16
PTPRU-209ENST00000526080 CDKN2A-AS1Q9UH64 79 aa7.79□□□□□ -1.16
PTPRU-209ENST00000526080 PRSS47A8MTI9 375 aa7.78□□□□□ -1.16
PTPRU-209ENST00000526080 F8W036 122 aa7.78□□□□□ -1.16
PTPRU-209ENST00000526080 PRLHP81277 87 aa7.78□□□□□ -1.16
PTPRU-209ENST00000526080 SPAG11AQ6PDA7 123 aa7.78□□□□□ -1.16
PTPRU-209ENST00000526080 ALKAL2Q6UX46 152 aa7.78□□□□□ -1.16
PTPRU-209ENST00000526080 ORMDL3Q8N138 153 aa7.78□□□□□ -1.16
PTPRU-209ENST00000526080 NPSP0C0P6 89 aa7.77□□□□□ -1.17
PTPRU-209ENST00000526080 MRPL54Q6P161 138 aaKnown RBP7.77□□□□□ -1.17
PTPRU-209ENST00000526080 LINC00337Q8N6G1 96 aa7.77□□□□□ -1.17
PTPRU-209ENST00000526080 IGKV2-28A0A075B6P5 120 aa7.76□□□□□ -1.17
PTPRU-209ENST00000526080 IGIPA6NJ69 53 aa7.76□□□□□ -1.17
PTPRU-209ENST00000526080 SCO1O75880 301 aa7.76□□□□□ -1.17
PTPRU-209ENST00000526080 IGKV2D-28P01615 120 aa7.76□□□□□ -1.17
PTPRU-209ENST00000526080 S100A8P05109 93 aa7.76□□□□□ -1.17
PTPRU-209ENST00000526080 SEC61BP60468 96 aaKnown RBP7.76□□□□□ -1.17
PTPRU-209ENST00000526080 HERVK_113P63121 156 aa7.76□□□□□ -1.17
PTPRU-209ENST00000526080 KRTAP19-2Q3LHN2 52 aa7.76□□□□□ -1.17
PTPRU-209ENST00000526080 PLEKHB2Q96CS7 222 aa7.76□□□□□ -1.17
PTPRU-209ENST00000526080 PRELID3AQ96N28 172 aa7.76□□□□□ -1.17
PTPRU-209ENST00000526080 VCX2Q9H322 139 aa7.76□□□□□ -1.17
PTPRU-209ENST00000526080 CYSLTR1Q9Y271 337 aa7.76□□□□□ -1.17
PTPRU-209ENST00000526080 TMEM136Q6ZRR5 245 aa7.75□□□□□ -1.17
PTPRU-209ENST00000526080 NKAPP1Q8N9T2 125 aa7.75□□□□□ -1.17
PTPRU-209ENST00000526080 SMIM1B2RUZ4 78 aa7.74□□□□□ -1.17
PTPRU-209ENST00000526080 ADIRFQ15847 76 aa7.74□□□□□ -1.17
PTPRU-209ENST00000526080 TMEM126AQ9H061 195 aa7.74□□□□□ -1.17
PTPRU-209ENST00000526080 TMEM238C9JI98 176 aa7.73□□□□□ -1.17
PTPRU-209ENST00000526080 SEC11AP67812 179 aa7.73□□□□□ -1.17
PTPRU-209ENST00000526080 FAM19A1Q7Z5A9 133 aa7.73□□□□□ -1.17
PTPRU-209ENST00000526080 M0R378 163 aa7.72□□□□□ -1.17
PTPRU-209ENST00000526080 MT1HP80294 61 aa7.72□□□□□ -1.17
PTPRU-209ENST00000526080 Q8N8P6 123 aa7.72□□□□□ -1.17
PTPRU-209ENST00000526080 NAT8Q9UHE5 227 aa7.72□□□□□ -1.17
PTPRU-209ENST00000526080 LAMTOR2Q9Y2Q5 125 aa7.72□□□□□ -1.17
PTPRU-209ENST00000526080 LOC389332A0A1B0GUA5 103 aa7.71□□□□□ -1.18
PTPRU-209ENST00000526080 PDZD11Q5EBL8 140 aa7.71□□□□□ -1.18
PTPRU-209ENST00000526080 COX7B2Q8TF08 81 aa7.71□□□□□ -1.18
PTPRU-209ENST00000526080 IGLV5-45A0A087WSX0 123 aa7.7□□□□□ -1.18
PTPRU-209ENST00000526080 C9JQL5 133 aa7.7□□□□□ -1.18
PTPRU-209ENST00000526080 VPREB1P12018 145 aa7.7□□□□□ -1.18
PTPRU-209ENST00000526080 ORMDL2Q53FV1 153 aa7.7□□□□□ -1.18
PTPRU-209ENST00000526080 ATP5L2Q7Z4Y8 100 aa7.7□□□□□ -1.18
PTPRU-209ENST00000526080 SPRR4Q96PI1 79 aa7.7□□□□□ -1.18
PTPRU-209ENST00000526080 MAP1LC3AQ9H492 121 aa7.7□□□□□ -1.18
PTPRU-209ENST00000526080 GEMIN7Q9H840 131 aaKnown RBP7.7□□□□□ -1.18
PTPRU-209ENST00000526080 FLGP20930 4061 aaPredicted RBP7.7□□□□□ -1.18
PTPRU-209ENST00000526080 RAB5BP61020 215 aa7.69□□□□□ -1.18
PTPRU-209ENST00000526080 XP32Q5T750 250 aa7.69□□□□□ -1.18
PTPRU-209ENST00000526080 CBLN2Q8IUK8 224 aa7.69□□□□□ -1.18
PTPRU-209ENST00000526080 TIMM17AQ99595 171 aa7.69□□□□□ -1.18
PTPRU-209ENST00000526080 GNB1LQ9BYB4 327 aa7.69□□□□□ -1.18
PTPRU-209ENST00000526080 K7EMI3 77 aa7.68□□□□□ -1.18
PTPRU-209ENST00000526080 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
PTPRU-209ENST00000526080 Q8NBF4 154 aa7.68□□□□□ -1.18
PTPRU-209ENST00000526080 CFC1BP0CG36 223 aa7.67□□□□□ -1.18
PTPRU-209ENST00000526080 PAPPA-AS1Q5QFB9 102 aa7.67□□□□□ -1.18
PTPRU-209ENST00000526080 DAND5Q8N907 189 aa7.67□□□□□ -1.18
PTPRU-209ENST00000526080 Q8NDZ9 215 aa7.67□□□□□ -1.18
PTPRU-209ENST00000526080 TINCRA0A1B0GVN0 87 aa7.66□□□□□ -1.18
PTPRU-209ENST00000526080 C4orf48Q5BLP8 95 aa7.66□□□□□ -1.18
PTPRU-209ENST00000526080 HIGD2AQ9BW72 106 aa7.66□□□□□ -1.18
PTPRU-209ENST00000526080 SPINK1P00995 79 aa7.65□□□□□ -1.18
PTPRU-209ENST00000526080 TOMM6Q96B49 74 aa7.65□□□□□ -1.18
PTPRU-209ENST00000526080 SPINK8P0C7L1 97 aa7.63□□□□□ -1.19
PTPRU-209ENST00000526080 KRTAP10-6P60371 365 aaPredicted RBP7.63□□□□□ -1.19
PTPRU-209ENST00000526080 SND1-IT1Q9HBX3 110 aa7.63□□□□□ -1.19
PTPRU-209ENST00000526080 ATP5LO75964 103 aa7.62□□□□□ -1.19
PTPRU-209ENST00000526080 RPS29P62273 56 aaKnown RBP7.62□□□□□ -1.19
PTPRU-209ENST00000526080 Q8N377 158 aa7.62□□□□□ -1.19
PTPRU-209ENST00000526080 NXT2Q9NPJ8 142 aaKnown RBP7.62□□□□□ -1.19
PTPRU-209ENST00000526080 A0A1B0GVG6 124 aa7.61□□□□□ -1.19
PTPRU-209ENST00000526080 ADCYAP1P18509 176 aa7.61□□□□□ -1.19
PTPRU-209ENST00000526080 PFN2P35080 140 aa7.61□□□□□ -1.19
PTPRU-209ENST00000526080 RPL24P83731 157 aaKnown RBP7.61□□□□□ -1.19
PTPRU-209ENST00000526080 ERASQ7Z444 233 aa7.61□□□□□ -1.19
PTPRU-209ENST00000526080 ZNF706Q9Y5V0 76 aaPredicted RBP7.61□□□□□ -1.19
PTPRU-209ENST00000526080 SSPOA2VEC9 5147 aa7.61□□□□□ -1.19
PTPRU-209ENST00000526080 FAM19A2Q8N3H0 131 aa7.6□□□□□ -1.19
PTPRU-209ENST00000526080 NDUFA12Q9UI09 145 aa7.6□□□□□ -1.19
PTPRU-209ENST00000526080 IGLV5-39A0A0G2JS06 123 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms