RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 SEC11AP67812 179 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 GAGE2EQ4V326 116 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 ATOH7Q8N100 152 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 MAP1LC3CQ9BXW4 147 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 GAGE2DQ9UEU5 116 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 HSPB8Q9UJY1 196 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 TMA7Q9Y2S6 64 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
CHMP4A-202ENST00000524955 PKHD1P08F94 4074 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 A0A087WYN8 130 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 LOC107984640A0A0U1RRK4 108 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 A0A1W2PNN7 141 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 TMEM223A0PJW6 202 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 F8VRH5 84 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 H3BRM9 83 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 SYS1-DBNDD2H3BUS1 97 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 CDK2AP2O75956 126 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 C3orf79P0CE67 100 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 TSPEAR-AS2P59090 65 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 SNRPEP62304 92 aaKnown RBP2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 COA6Q5JTJ3 125 aaKnown RBP2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 Q6ZRP5 223 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 Q6ZSA8 131 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 Q8IZM0 81 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 HIST3H2BBQ8N257 126 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 STPG4Q8N801 248 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 SPACA4Q8TDM5 124 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 C2orf48Q96LS8 159 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 XAGE1AQ9HD64 81 aa2.92□□□□□ -1.94
CHMP4A-202ENST00000524955 DYNC1H1Q14204 4646 aaKnown RBP2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 KIAA1109Q2LD37 5005 aa2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 IGLV5-39A0A0G2JS06 123 aa2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 DPM2O94777 84 aa2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 IGKCP01834 107 aa2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 S100A6P06703 90 aa2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 PFN2P35080 140 aa2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 PTTG1IPP53801 180 aa2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 FAM19A5Q7Z5A7 132 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 LINC00528Q8N1L1 170 aa2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 LINC01561Q8N1V8 128 aa2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 HIST1H2BLQ99880 126 aa2.91□□□□□ -1.94
CHMP4A-202ENST00000524955 S100A2P29034 98 aa2.9□□□□□ -1.95
CHMP4A-202ENST00000524955 CIRBPQ14011 172 aaKnown RBP2.9□□□□□ -1.95
CHMP4A-202ENST00000524955 C9orf129Q5T035 196 aaKnown RBP2.9□□□□□ -1.95
CHMP4A-202ENST00000524955 Q5VSD8 79 aa2.9□□□□□ -1.95
CHMP4A-202ENST00000524955 PHF5AQ7RTV0 110 aaKnown RBP2.9□□□□□ -1.95
CHMP4A-202ENST00000524955 KRTAP7-1Q8IUC3 87 aa2.9□□□□□ -1.95
CHMP4A-202ENST00000524955 Q8N1X5 172 aa2.9□□□□□ -1.95
CHMP4A-202ENST00000524955 TTTY13Q9BZ97 58 aa2.9□□□□□ -1.95
CHMP4A-202ENST00000524955 IGKV2D-26A0A0A0MRZ7 120 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 TRBV30A0A0K0K1B3 111 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 C5orf52A6NGY3 159 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 EPM2AB3EWF7 344 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 NDUFC2-KCTD14E9PQ53 114 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 LEPROTO15243 131 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 SMIM13P0DJ93 91 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 PLNP26678 52 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 LINC00158P58513 81 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 RNF151Q2KHN1 245 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 SERTAD4-AS1Q5TG53 156 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 LINC01545Q5VT33 79 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 PET117Q6UWS5 81 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 KRTAP11-1Q8IUC1 163 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 DAND5Q8N907 189 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 PLAC8Q9NZF1 115 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 NDUFA12Q9UI09 145 aa2.89□□□□□ -1.95
CHMP4A-202ENST00000524955 GAGE10A6NGK3 116 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 F8WDY8 70 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 FAM229AH3BQW9 127 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 J3QQQ9 107 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 TLX1NBP0CAT3 122 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 LGALS3P17931 250 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 CXCL5P42830 114 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 HNRNPA3P51991 378 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 RPL37AP61513 92 aaKnown RBP2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 NPC2P61916 151 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 ANKRD39Q53RE8 183 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 MEIG1Q5JSS6 88 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 Q8NDZ9 215 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 TP73-AS1Q9UF72 201 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 ERG28Q9UKR5 140 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 LRP1BQ9NZR2 4599 aa2.88□□□□□ -1.95
CHMP4A-202ENST00000524955 DNAH5Q8TE73 4624 aa2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 C20orf202A1L168 122 aa2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 RPL37AP8A6NKH3 93 aa2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 E9PLD3 99 aa2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 M0QXV9 152 aa2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 SCGB1D1O95968 90 aa2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 NMUP48645 174 aa2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 KRTAP10-4P60372 401 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 HERVK_113P61574 105 aa2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 PRR3P79522 188 aaKnown RBP2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 PLEKHB2Q96CS7 222 aa2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 SND1-IT1Q9HBX3 110 aa2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 LINC00474Q9P2X8 69 aa2.87□□□□□ -1.95
CHMP4A-202ENST00000524955 APOBP04114 4563 aaKnown RBP2.86□□□□□ -1.95
CHMP4A-202ENST00000524955 HSPG2P98160 4391 aa2.86□□□□□ -1.95
CHMP4A-202ENST00000524955 MYMXA0A1B0GTQ4 84 aa2.86□□□□□ -1.95
CHMP4A-202ENST00000524955 NCR3O14931 201 aa2.86□□□□□ -1.95
CHMP4A-202ENST00000524955 EIF4EBP3O60516 100 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms