RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 KRTAP10-4P60372 401 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC4-204ENST00000524797 HSD52Q0P140 79 aa7.17□□□□□ -1.26
TRAPPC4-204ENST00000524797 FAM104BQ5XKR9 115 aa7.17□□□□□ -1.26
TRAPPC4-204ENST00000524797 SPANXA1Q9NS26 97 aa7.17□□□□□ -1.26
TRAPPC4-204ENST00000524797 IGHV3-64A0A075B6Q5 118 aa7.16□□□□□ -1.26
TRAPPC4-204ENST00000524797 PANO1I0J062 215 aa7.16□□□□□ -1.26
TRAPPC4-204ENST00000524797 VCYO14598 125 aa7.16□□□□□ -1.26
TRAPPC4-204ENST00000524797 C2orf91Q6ZV80 131 aa7.16□□□□□ -1.26
TRAPPC4-204ENST00000524797 PKHD1L1Q86WI1 4243 aa7.16□□□□□ -1.26
TRAPPC4-204ENST00000524797 H3BUT2 72 aa7.15□□□□□ -1.26
TRAPPC4-204ENST00000524797 SUMO2P61956 95 aaKnown RBP7.15□□□□□ -1.26
TRAPPC4-204ENST00000524797 FOXI1Q12951 378 aa7.15□□□□□ -1.26
TRAPPC4-204ENST00000524797 DMBT1Q9UGM3 2413 aaPredicted RBP7.15□□□□□ -1.26
TRAPPC4-204ENST00000524797 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.15□□□□□ -1.27
TRAPPC4-204ENST00000524797 LINC00959A0A1B0GUT2 108 aa7.15□□□□□ -1.27
TRAPPC4-204ENST00000524797 FCER1GP30273 86 aa7.15□□□□□ -1.27
TRAPPC4-204ENST00000524797 HIGD2BQ4VC39 106 aa7.15□□□□□ -1.27
TRAPPC4-204ENST00000524797 CDC42SE2Q9NRR3 84 aa7.15□□□□□ -1.27
TRAPPC4-204ENST00000524797 ERG28Q9UKR5 140 aa7.15□□□□□ -1.27
TRAPPC4-204ENST00000524797 F8WDY8 70 aa7.14□□□□□ -1.27
TRAPPC4-204ENST00000524797 CIRBPQ14011 172 aaKnown RBP7.14□□□□□ -1.27
TRAPPC4-204ENST00000524797 SPCS1Q9Y6A9 102 aa7.14□□□□□ -1.27
TRAPPC4-204ENST00000524797 GVQW2A0A096LPI5 108 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC4-204ENST00000524797 J3QR89 54 aa7.13□□□□□ -1.27
TRAPPC4-204ENST00000524797 XCL1P47992 114 aa7.13□□□□□ -1.27
TRAPPC4-204ENST00000524797 SMIM20Q8N5G0 67 aa7.13□□□□□ -1.27
TRAPPC4-204ENST00000524797 A0A1W2PPM0 123 aa7.13□□□□□ -1.27
TRAPPC4-204ENST00000524797 FABP2P12104 132 aa7.13□□□□□ -1.27
TRAPPC4-204ENST00000524797 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
TRAPPC4-204ENST00000524797 SS18Q15532 418 aa7.13□□□□□ -1.27
TRAPPC4-204ENST00000524797 FA2HQ7L5A8 372 aa7.13□□□□□ -1.27
TRAPPC4-204ENST00000524797 C20orf78Q9BR46 151 aa7.13□□□□□ -1.27
TRAPPC4-204ENST00000524797 MYCBP2O75592 4640 aa7.13□□□□□ -1.27
TRAPPC4-204ENST00000524797 CKS2P33552 79 aa7.12□□□□□ -1.27
TRAPPC4-204ENST00000524797 KIR2DL4Q99706 377 aa7.12□□□□□ -1.27
TRAPPC4-204ENST00000524797 UBE2D4Q9Y2X8 147 aa7.12□□□□□ -1.27
TRAPPC4-204ENST00000524797 IGHV1-58A0A0C4DH39 117 aa7.11□□□□□ -1.27
TRAPPC4-204ENST00000524797 TNFRSF6BO95407 300 aa7.11□□□□□ -1.27
TRAPPC4-204ENST00000524797 CHTF8P0CG12 524 aa7.11□□□□□ -1.27
TRAPPC4-204ENST00000524797 SPACA4Q8TDM5 124 aa7.11□□□□□ -1.27
TRAPPC4-204ENST00000524797 CSDC2Q9Y534 153 aaKnown RBP7.11□□□□□ -1.27
TRAPPC4-204ENST00000524797 KRTAP29-1A8MX34 341 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC4-204ENST00000524797 D6R8Y8 96 aa7.11□□□□□ -1.27
TRAPPC4-204ENST00000524797 RPL24P83731 157 aaKnown RBP7.11□□□□□ -1.27
TRAPPC4-204ENST00000524797 CD164L2Q6UWJ8 174 aa7.11□□□□□ -1.27
TRAPPC4-204ENST00000524797 TIMM21Q9BVV7 248 aa7.11□□□□□ -1.27
TRAPPC4-204ENST00000524797 J3QL48 77 aa7.1□□□□□ -1.27
TRAPPC4-204ENST00000524797 M0QXV9 152 aa7.1□□□□□ -1.27
TRAPPC4-204ENST00000524797 NPYP01303 97 aa7.1□□□□□ -1.27
TRAPPC4-204ENST00000524797 PRSS3P2Q8NHM4 247 aa7.1□□□□□ -1.27
TRAPPC4-204ENST00000524797 RAB37Q96AX2 223 aa7.1□□□□□ -1.27
TRAPPC4-204ENST00000524797 SMIM2Q9BVW6 85 aa7.1□□□□□ -1.27
TRAPPC4-204ENST00000524797 SMIM13P0DJ93 91 aa7.09□□□□□ -1.27
TRAPPC4-204ENST00000524797 RNASE13Q5GAN3 156 aaKnown RBP7.09□□□□□ -1.27
TRAPPC4-204ENST00000524797 Q6ZUT4 128 aa7.09□□□□□ -1.27
TRAPPC4-204ENST00000524797 A0A087WYN8 130 aa7.09□□□□□ -1.27
TRAPPC4-204ENST00000524797 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC4-204ENST00000524797 COX6A2Q02221 97 aa7.09□□□□□ -1.27
TRAPPC4-204ENST00000524797 LINC00526Q96FQ7 95 aa7.09□□□□□ -1.27
TRAPPC4-204ENST00000524797 DPH3Q96FX2 82 aa7.08□□□□□ -1.28
TRAPPC4-204ENST00000524797 NAA38Q9BRA0 125 aaKnown RBP7.08□□□□□ -1.28
TRAPPC4-204ENST00000524797 PLAC8Q9NZF1 115 aa7.08□□□□□ -1.28
TRAPPC4-204ENST00000524797 RPL39P62891 51 aaKnown RBP7.07□□□□□ -1.28
TRAPPC4-204ENST00000524797 ORMDL3Q8N138 153 aa7.07□□□□□ -1.28
TRAPPC4-204ENST00000524797 HERC1Q15751 4861 aa7.07□□□□□ -1.28
TRAPPC4-204ENST00000524797 CARD19Q96LW7 228 aa7.07□□□□□ -1.28
TRAPPC4-204ENST00000524797 PRELID3AQ96N28 172 aa7.07□□□□□ -1.28
TRAPPC4-204ENST00000524797 TRAV13-1A0A0B4J241 112 aa7.06□□□□□ -1.28
TRAPPC4-204ENST00000524797 IGKV2-24A0A0C4DH68 120 aa7.06□□□□□ -1.28
TRAPPC4-204ENST00000524797 F8W1H4 67 aa7.06□□□□□ -1.28
TRAPPC4-204ENST00000524797 COX7A2LO14548 114 aa7.06□□□□□ -1.28
TRAPPC4-204ENST00000524797 FAM104AQ969W3 186 aa7.06□□□□□ -1.28
TRAPPC4-204ENST00000524797 A0A096LNI7 61 aa7.05□□□□□ -1.28
TRAPPC4-204ENST00000524797 ZNF561-AS1K7EIQ3 104 aa7.05□□□□□ -1.28
TRAPPC4-204ENST00000524797 OXTP01178 125 aa7.05□□□□□ -1.28
TRAPPC4-204ENST00000524797 SYCNQ0VAF6 134 aa7.05□□□□□ -1.28
TRAPPC4-204ENST00000524797 HIGD1BQ9P298 99 aa7.05□□□□□ -1.28
TRAPPC4-204ENST00000524797 MALP21145 153 aa7.05□□□□□ -1.28
TRAPPC4-204ENST00000524797 NMUP48645 174 aa7.05□□□□□ -1.28
TRAPPC4-204ENST00000524797 MRPS36P82909 103 aaKnown RBP7.05□□□□□ -1.28
TRAPPC4-204ENST00000524797 PKIGQ9Y2B9 76 aa7.05□□□□□ -1.28
TRAPPC4-204ENST00000524797 FAT3Q8TDW7 4589 aa7.05□□□□□ -1.28
TRAPPC4-204ENST00000524797 IGLV4-69A0A075B6H9 119 aa7.04□□□□□ -1.28
TRAPPC4-204ENST00000524797 HBDP02042 147 aa7.04□□□□□ -1.28
TRAPPC4-204ENST00000524797 IFI27P40305 119 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC4-204ENST00000524797 C5orf38Q86SI9 138 aa7.04□□□□□ -1.28
TRAPPC4-204ENST00000524797 OPRPNQ99935 248 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC4-204ENST00000524797 CYSLTR1Q9Y271 337 aa7.04□□□□□ -1.28
TRAPPC4-204ENST00000524797 B5MCH6 92 aa7.03□□□□□ -1.28
TRAPPC4-204ENST00000524797 IFI27L1Q96BM0 104 aa7.03□□□□□ -1.28
TRAPPC4-204ENST00000524797 ANAPC13Q9BS18 74 aa7.03□□□□□ -1.28
TRAPPC4-204ENST00000524797 A0A096LNJ9 63 aa7.03□□□□□ -1.28
TRAPPC4-204ENST00000524797 Q6ZRU5 148 aa7.03□□□□□ -1.28
TRAPPC4-204ENST00000524797 MAP1LC3AQ9H492 121 aa7.03□□□□□ -1.28
TRAPPC4-204ENST00000524797 LOC389332A0A1B0GUA5 103 aa7.02□□□□□ -1.29
TRAPPC4-204ENST00000524797 APOMO95445 188 aa7.02□□□□□ -1.29
TRAPPC4-204ENST00000524797 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
TRAPPC4-204ENST00000524797 PCP2Q8IVA1 136 aa7.02□□□□□ -1.29
TRAPPC4-204ENST00000524797 C7orf33Q8WU49 177 aa7.02□□□□□ -1.29
TRAPPC4-204ENST00000524797 C2orf48Q96LS8 159 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms