RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 CST9LP1Q5W188 147 aa4.06□□□□□ -1.76
PUM1-213ENST00000524516 LIMD2Q9BT23 127 aa4.06□□□□□ -1.76
PUM1-213ENST00000524516 TRBV20-1A0A075B6N2 111 aa4.05□□□□□ -1.76
PUM1-213ENST00000524516 TRBV6-5A0A0K0K1A5 114 aa4.05□□□□□ -1.76
PUM1-213ENST00000524516 GIPP09681 153 aaPredicted RBP4.05□□□□□ -1.76
PUM1-213ENST00000524516 SPRR2EP22531 72 aa4.05□□□□□ -1.76
PUM1-213ENST00000524516 ATP6V0CP27449 155 aa4.05□□□□□ -1.76
PUM1-213ENST00000524516 SPRR2BP35325 72 aa4.05□□□□□ -1.76
PUM1-213ENST00000524516 SPRR2AP35326 72 aa4.05□□□□□ -1.76
PUM1-213ENST00000524516 C6orf226Q5I0X4 101 aa4.05□□□□□ -1.76
PUM1-213ENST00000524516 TMEM18Q96B42 140 aa4.05□□□□□ -1.76
PUM1-213ENST00000524516 TCEAL7Q9BRU2 100 aa4.05□□□□□ -1.76
PUM1-213ENST00000524516 MED9Q9NWA0 146 aa4.05□□□□□ -1.76
PUM1-213ENST00000524516 FXYD6-FXYD2A0A087WZ82 144 aa4.04□□□□□ -1.76
PUM1-213ENST00000524516 GHRHP01286 108 aa4.04□□□□□ -1.76
PUM1-213ENST00000524516 S100A9P06702 114 aaKnown RBP4.04□□□□□ -1.76
PUM1-213ENST00000524516 HBBP68871 147 aa4.04□□□□□ -1.76
PUM1-213ENST00000524516 GAGE2AQ6NT46 116 aa4.04□□□□□ -1.76
PUM1-213ENST00000524516 FAM236DA0A1B0GTK5 79 aa4.03□□□□□ -1.76
PUM1-213ENST00000524516 A6NN06 94 aa4.03□□□□□ -1.76
PUM1-213ENST00000524516 FAM236CP0DP71 79 aa4.03□□□□□ -1.76
PUM1-213ENST00000524516 ZNF726P1Q15940 193 aa4.03□□□□□ -1.76
PUM1-213ENST00000524516 C9orf153Q5TBE3 101 aa4.03□□□□□ -1.76
PUM1-213ENST00000524516 RPL7L1Q6DKI1 246 aaKnown RBP4.03□□□□□ -1.76
PUM1-213ENST00000524516 PSMG3Q9BT73 122 aaPredicted RBP4.03□□□□□ -1.76
PUM1-213ENST00000524516 TIMM21Q9BVV7 248 aa4.03□□□□□ -1.76
PUM1-213ENST00000524516 TNFSF18Q9UNG2 199 aa4.03□□□□□ -1.76
PUM1-213ENST00000524516 TRBV27A0A0K0K1C4 114 aa4.02□□□□□ -1.77
PUM1-213ENST00000524516 F8VRH5 84 aa4.02□□□□□ -1.77
PUM1-213ENST00000524516 SERF2P84101 59 aa4.02□□□□□ -1.77
PUM1-213ENST00000524516 LINC00483Q53H64 154 aa4.02□□□□□ -1.77
PUM1-213ENST00000524516 ALKBH7Q9BT30 221 aaPredicted RBP4.02□□□□□ -1.77
PUM1-213ENST00000524516 CTXND1A0A1B0GTU2 59 aa4.01□□□□□ -1.77
PUM1-213ENST00000524516 SCO2A0A1W2PP80 73 aa4.01□□□□□ -1.77
PUM1-213ENST00000524516 ARPC5O15511 151 aa4.01□□□□□ -1.77
PUM1-213ENST00000524516 POLR2KP53803 58 aaKnown RBP4.01□□□□□ -1.77
PUM1-213ENST00000524516 ATP11AUNQ6ZP68 121 aa4.01□□□□□ -1.77
PUM1-213ENST00000524516 FAM19A3Q7Z5A8 133 aa4.01□□□□□ -1.77
PUM1-213ENST00000524516 LINC00518Q8N0U6 118 aa4.01□□□□□ -1.77
PUM1-213ENST00000524516 CHTOPQ9Y3Y2 248 aaKnown RBP4.01□□□□□ -1.77
PUM1-213ENST00000524516 BORCS7-ASMTA0A0B4J1R7 106 aa4□□□□□ -1.77
PUM1-213ENST00000524516 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
PUM1-213ENST00000524516 A0A1B0GV50 99 aa4□□□□□ -1.77
PUM1-213ENST00000524516 HMSDA8MTL9 139 aa4□□□□□ -1.77
PUM1-213ENST00000524516 S100A12P80511 92 aa4□□□□□ -1.77
PUM1-213ENST00000524516 C6orf99Q4VX62 202 aa4□□□□□ -1.77
PUM1-213ENST00000524516 TMUB2Q71RG4 321 aa4□□□□□ -1.77
PUM1-213ENST00000524516 Q8IZM0 81 aa4□□□□□ -1.77
PUM1-213ENST00000524516 NRACQ8N912 160 aa4□□□□□ -1.77
PUM1-213ENST00000524516 SMCR5Q8TEV8 140 aa4□□□□□ -1.77
PUM1-213ENST00000524516 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
PUM1-213ENST00000524516 PCP4L1A6NKN8 68 aa3.99□□□□□ -1.77
PUM1-213ENST00000524516 VCYO14598 125 aa3.99□□□□□ -1.77
PUM1-213ENST00000524516 TAGLN2P37802 199 aaKnown RBP3.99□□□□□ -1.77
PUM1-213ENST00000524516 RPL39P62891 51 aaKnown RBP3.99□□□□□ -1.77
PUM1-213ENST00000524516 AKR1C8PQ5T2L2 129 aa3.99□□□□□ -1.77
PUM1-213ENST00000524516 HRCT1Q6UXD1 115 aa3.99□□□□□ -1.77
PUM1-213ENST00000524516 Q6ZN92 141 aa3.99□□□□□ -1.77
PUM1-213ENST00000524516 KCNRGQ8N5I3 272 aa3.99□□□□□ -1.77
PUM1-213ENST00000524516 Q8N9P0 234 aaPredicted RBP3.99□□□□□ -1.77
PUM1-213ENST00000524516 MAP1LC3B2A6NCE7 125 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 TEX46H3BTG2 121 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 PAGE4O60829 102 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 APOC3P02656 99 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 RAB5BP61020 215 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 KIAA1644Q3SXP7 199 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 UQCC3Q6UW78 93 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 ALKAL2Q6UX46 152 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 LINC01561Q8N1V8 128 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 CNFNQ9BYD5 112 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 MAP1LC3BQ9GZQ8 125 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 SPANXA1Q9NS26 97 aa3.98□□□□□ -1.77
PUM1-213ENST00000524516 KANTRA0A1W2PQU2 76 aa3.97□□□□□ -1.77
PUM1-213ENST00000524516 MRPS36P82909 103 aaKnown RBP3.97□□□□□ -1.77
PUM1-213ENST00000524516 SFT2D1Q8WV19 159 aa3.97□□□□□ -1.77
PUM1-213ENST00000524516 BIN3Q9NQY0 253 aa3.97□□□□□ -1.77
PUM1-213ENST00000524516 H2AFB1P0C5Y9 115 aa3.96□□□□□ -1.78
PUM1-213ENST00000524516 RPL35P42766 123 aaKnown RBP3.96□□□□□ -1.78
PUM1-213ENST00000524516 CXCL5P42830 114 aa3.96□□□□□ -1.78
PUM1-213ENST00000524516 AKR1D1P51857 326 aa3.96□□□□□ -1.78
PUM1-213ENST00000524516 ZNF345Q14585 488 aa3.96□□□□□ -1.78
PUM1-213ENST00000524516 FAM213BQ8TBF2 198 aa3.96□□□□□ -1.78
PUM1-213ENST00000524516 FAM104AQ969W3 186 aa3.96□□□□□ -1.78
PUM1-213ENST00000524516 MRPL18Q9H0U6 180 aaKnown RBP3.96□□□□□ -1.78
PUM1-213ENST00000524516 F8W036 122 aa3.95□□□□□ -1.78
PUM1-213ENST00000524516 VPREB1P12018 145 aa3.95□□□□□ -1.78
PUM1-213ENST00000524516 Q6ZVH6 145 aa3.95□□□□□ -1.78
PUM1-213ENST00000524516 SVBPQ8N300 66 aa3.95□□□□□ -1.78
PUM1-213ENST00000524516 C12orf57Q99622 126 aa3.95□□□□□ -1.78
PUM1-213ENST00000524516 TRBV20OR9-2A0A075B6H5 130 aa3.94□□□□□ -1.78
PUM1-213ENST00000524516 SNAPINO95295 136 aa3.94□□□□□ -1.78
PUM1-213ENST00000524516 SUMO2P61956 95 aaKnown RBP3.94□□□□□ -1.78
PUM1-213ENST00000524516 CCL20P78556 96 aa3.94□□□□□ -1.78
PUM1-213ENST00000524516 RPL24P83731 157 aaKnown RBP3.94□□□□□ -1.78
PUM1-213ENST00000524516 FAM74A3Q4VXF1 159 aa3.94□□□□□ -1.78
PUM1-213ENST00000524516 CENPWQ5EE01 88 aa3.94□□□□□ -1.78
PUM1-213ENST00000524516 MBD3L1Q8WWY6 194 aa3.94□□□□□ -1.78
PUM1-213ENST00000524516 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
PUM1-213ENST00000524516 TMEM218A2RU14 115 aa3.93□□□□□ -1.78
PUM1-213ENST00000524516 PRSS47A8MTI9 375 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms