RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 PDZD11Q5EBL8 140 aa13.05□□□□□ -0.32
TRAPPC9-215ENST00000524162 C6orf226Q5I0X4 101 aa13.05□□□□□ -0.32
TRAPPC9-215ENST00000524162 FAT3Q8TDW7 4589 aa13.05□□□□□ -0.32
TRAPPC9-215ENST00000524162 NDUFC2-KCTD14E9PQ53 114 aa13.04□□□□□ -0.32
TRAPPC9-215ENST00000524162 HNRNPA3P51991 378 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-215ENST00000524162 CKS1BP61024 79 aa13.04□□□□□ -0.32
TRAPPC9-215ENST00000524162 PRR3P79522 188 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-215ENST00000524162 C9orf116Q5BN46 136 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-215ENST00000524162 Q6ZRP5 223 aa13.04□□□□□ -0.32
TRAPPC9-215ENST00000524162 LINC00469Q8N7U9 141 aa13.04□□□□□ -0.32
TRAPPC9-215ENST00000524162 A0A1W2PNN7 141 aa13.03□□□□□ -0.32
TRAPPC9-215ENST00000524162 ATP5LO75964 103 aa13.03□□□□□ -0.32
TRAPPC9-215ENST00000524162 C2orf82Q6UX34 121 aa13.03□□□□□ -0.32
TRAPPC9-215ENST00000524162 CHCHD1Q96BP2 118 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-215ENST00000524162 SMIM1B2RUZ4 78 aa13.02□□□□□ -0.33
TRAPPC9-215ENST00000524162 ODF1Q14990 250 aa13.02□□□□□ -0.33
TRAPPC9-215ENST00000524162 CBLN2Q8IUK8 224 aa13.02□□□□□ -0.33
TRAPPC9-215ENST00000524162 SLC7A5P1Q8MH63 180 aa13.02□□□□□ -0.33
TRAPPC9-215ENST00000524162 J3QL48 77 aa13.01□□□□□ -0.33
TRAPPC9-215ENST00000524162 IGLC3P0DOY3 106 aa13.01□□□□□ -0.33
TRAPPC9-215ENST00000524162 TOMM7Q9P0U1 55 aa13.01□□□□□ -0.33
TRAPPC9-215ENST00000524162 F8VRH5 84 aa13□□□□□ -0.33
TRAPPC9-215ENST00000524162 H3BRM9 83 aa12.99□□□□□ -0.33
TRAPPC9-215ENST00000524162 COX7B2Q8TF08 81 aa12.96□□□□□ -0.33
TRAPPC9-215ENST00000524162 IGLV5-39A0A0G2JS06 123 aa12.95□□□□□ -0.34
TRAPPC9-215ENST00000524162 PMCHL1Q16048 86 aa12.95□□□□□ -0.34
TRAPPC9-215ENST00000524162 GAGE2EQ4V326 116 aa12.95□□□□□ -0.34
TRAPPC9-215ENST00000524162 GAGE2DQ9UEU5 116 aa12.95□□□□□ -0.34
TRAPPC9-215ENST00000524162 SPINK6Q6UWN8 80 aa12.94□□□□□ -0.34
TRAPPC9-215ENST00000524162 TRGC2P03986 189 aa12.93□□□□□ -0.34
TRAPPC9-215ENST00000524162 TRAV12-1A0A0B4J245 112 aa12.92□□□□□ -0.34
TRAPPC9-215ENST00000524162 NDUFA6P56556 154 aa12.92□□□□□ -0.34
TRAPPC9-215ENST00000524162 SRSF9Q13242 221 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAPPC9-215ENST00000524162 C9orf129Q5T035 196 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-215ENST00000524162 SPINK8P0C7L1 97 aa12.91□□□□□ -0.34
TRAPPC9-215ENST00000524162 ZNF22P17026 224 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-215ENST00000524162 BAGE3Q86Y29 109 aa12.91□□□□□ -0.34
TRAPPC9-215ENST00000524162 FAM168BA1KXE4 195 aa12.9□□□□□ -0.34
TRAPPC9-215ENST00000524162 COLCA2A8K830 154 aa12.9□□□□□ -0.34
TRAPPC9-215ENST00000524162 HSBP1O75506 76 aa12.9□□□□□ -0.34
TRAPPC9-215ENST00000524162 SFTA2Q6UW10 78 aa12.9□□□□□ -0.34
TRAPPC9-215ENST00000524162 PHF5AQ7RTV0 110 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-215ENST00000524162 KRTAP7-1Q8IUC3 87 aa12.9□□□□□ -0.34
TRAPPC9-215ENST00000524162 PSORS1C2Q9UIG4 136 aa12.9□□□□□ -0.34
TRAPPC9-215ENST00000524162 IFI27L1Q96BM0 104 aa12.89□□□□□ -0.35
TRAPPC9-215ENST00000524162 C11orf86A6NJI1 115 aa12.87□□□□□ -0.35
TRAPPC9-215ENST00000524162 M0QXV9 152 aa12.87□□□□□ -0.35
TRAPPC9-215ENST00000524162 FAM19A5Q7Z5A7 132 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC9-215ENST00000524162 CHTOPQ9Y3Y2 248 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-215ENST00000524162 TP73-AS1Q9UF72 201 aa12.86□□□□□ -0.35
TRAPPC9-215ENST00000524162 PLA2G2DQ9UNK4 145 aa12.85□□□□□ -0.35
TRAPPC9-215ENST00000524162 REG3GQ6UW15 175 aa12.84□□□□□ -0.35
TRAPPC9-215ENST00000524162 LINC01600Q96MT4 127 aa12.84□□□□□ -0.35
TRAPPC9-215ENST00000524162 MT1HL1P0DM35 61 aa12.83□□□□□ -0.36
TRAPPC9-215ENST00000524162 COX17Q14061 63 aa12.83□□□□□ -0.36
TRAPPC9-215ENST00000524162 TMEM170BQ5T4T1 132 aa12.83□□□□□ -0.36
TRAPPC9-215ENST00000524162 XAGE1AQ9HD64 81 aa12.83□□□□□ -0.36
TRAPPC9-215ENST00000524162 TNXBP22105 4242 aa12.82□□□□□ -0.36
TRAPPC9-215ENST00000524162 LINC00310P59036 64 aa12.82□□□□□ -0.36
TRAPPC9-215ENST00000524162 LBHQ53QV2 105 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC9-215ENST00000524162 C1orf137Q5JT78 98 aa12.82□□□□□ -0.36
TRAPPC9-215ENST00000524162 SERTAD4-AS1Q5TG53 156 aa12.82□□□□□ -0.36
TRAPPC9-215ENST00000524162 FAM19A2Q8N3H0 131 aa12.82□□□□□ -0.36
TRAPPC9-215ENST00000524162 SERF1AO75920 110 aa12.81□□□□□ -0.36
TRAPPC9-215ENST00000524162 LEPROTL1O95214 131 aa12.8□□□□□ -0.36
TRAPPC9-215ENST00000524162 IGLV7-43P04211 117 aa12.8□□□□□ -0.36
TRAPPC9-215ENST00000524162 C22orf24Q9Y442 160 aa12.8□□□□□ -0.36
TRAPPC9-215ENST00000524162 TMEM223A0PJW6 202 aa12.79□□□□□ -0.36
TRAPPC9-215ENST00000524162 KRTAP11-1Q8IUC1 163 aa12.79□□□□□ -0.36
TRAPPC9-215ENST00000524162 IGLV5-37A0A075B6J1 123 aa12.78□□□□□ -0.36
TRAPPC9-215ENST00000524162 UBE2BP63146 152 aa12.78□□□□□ -0.36
TRAPPC9-215ENST00000524162 ZNF625Q96I27 306 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC9-215ENST00000524162 HSPB8Q9UJY1 196 aa12.78□□□□□ -0.36
TRAPPC9-215ENST00000524162 NUPR1O60356 82 aa12.76□□□□□ -0.37
TRAPPC9-215ENST00000524162 MRPL55Q7Z7F7 128 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-215ENST00000524162 ERG28Q9UKR5 140 aa12.76□□□□□ -0.37
TRAPPC9-215ENST00000524162 DIRC1Q969H9 104 aa12.75□□□□□ -0.37
TRAPPC9-215ENST00000524162 PLNP26678 52 aa12.72□□□□□ -0.37
TRAPPC9-215ENST00000524162 PFN2P35080 140 aa12.71□□□□□ -0.37
TRAPPC9-215ENST00000524162 KRTAP10-8P60410 259 aa12.71□□□□□ -0.37
TRAPPC9-215ENST00000524162 H0Y9J4 135 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HIST1H2BKO60814 126 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HIST1H2BJP06899 126 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HIST1H2BOP23527 126 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HIST1H2BBP33778 126 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HIST1H2BDP58876 126 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HIST1H2BCP62807 126 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HIST2H2BEQ16778 126 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HIST1H2BHQ93079 126 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HIST1H2BNQ99877 126 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HIST1H2BMQ99879 126 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 SND1-IT1Q9HBX3 110 aa12.7□□□□□ -0.38
TRAPPC9-215ENST00000524162 HERV-K104P63124 156 aa12.69□□□□□ -0.38
TRAPPC9-215ENST00000524162 LINC00587B1AMM8 73 aa12.68□□□□□ -0.38
TRAPPC9-215ENST00000524162 SCO1O75880 301 aa12.68□□□□□ -0.38
TRAPPC9-215ENST00000524162 RPL24P83731 157 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-215ENST00000524162 NKAPP1Q8N9T2 125 aa12.68□□□□□ -0.38
TRAPPC9-215ENST00000524162 LINC00167Q96N53 147 aa12.68□□□□□ -0.38
TRAPPC9-215ENST00000524162 ZNF861PO60384 105 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms