RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 SYCNQ0VAF6 134 aa2.64□□□□□ -1.99
HDAC2-216ENST00000523628 LINC01551Q86U37 167 aa2.64□□□□□ -1.99
HDAC2-216ENST00000523628 CEND1Q8N111 149 aa2.64□□□□□ -1.99
HDAC2-216ENST00000523628 GATD1Q8NB37 220 aa2.64□□□□□ -1.99
HDAC2-216ENST00000523628 CHCHD10Q8WYQ3 142 aaPredicted RBP2.64□□□□□ -1.99
HDAC2-216ENST00000523628 CDC42SE2Q9NRR3 84 aa2.64□□□□□ -1.99
HDAC2-216ENST00000523628 MRPL35Q9NZE8 188 aaKnown RBP2.64□□□□□ -1.99
HDAC2-216ENST00000523628 DNAH5Q8TE73 4624 aa2.64□□□□□ -1.99
HDAC2-216ENST00000523628 ABCA13Q86UQ4 5058 aa2.64□□□□□ -1.99
HDAC2-216ENST00000523628 TRAV9-1A0A075B6T8 112 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 TRBV30A0A0K0K1B3 111 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 A0A1B0GV50 99 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 SMIM27A0A1W2PRY6 76 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 TLX1NBP0CAT3 122 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 CKS2P33552 79 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 POLR2KP53803 58 aaKnown RBP2.63□□□□□ -1.99
HDAC2-216ENST00000523628 RAB14P61106 215 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 ORMDL2Q53FV1 153 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 KRTAP26-1Q6PEX3 210 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 ORMDL3Q8N138 153 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 DIRC1Q969H9 104 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 CAMK2N2Q96S95 79 aa2.63□□□□□ -1.99
HDAC2-216ENST00000523628 RNASE7Q9H1E1 156 aaKnown RBP2.63□□□□□ -1.99
HDAC2-216ENST00000523628 APOBP04114 4563 aaKnown RBP2.63□□□□□ -1.99
HDAC2-216ENST00000523628 FLG2Q5D862 2391 aaPredicted RBP2.63□□□□□ -1.99
HDAC2-216ENST00000523628 IGLV4-60A0A075B6I1 120 aa2.62□□□□□ -1.99
HDAC2-216ENST00000523628 MT-ND4LP03901 98 aa2.62□□□□□ -1.99
HDAC2-216ENST00000523628 RAB4AP20338 218 aa2.62□□□□□ -1.99
HDAC2-216ENST00000523628 PRR3P79522 188 aaKnown RBP2.62□□□□□ -1.99
HDAC2-216ENST00000523628 WFDC2Q14508 124 aa2.62□□□□□ -1.99
HDAC2-216ENST00000523628 MAJINQ3KP22 176 aa2.62□□□□□ -1.99
HDAC2-216ENST00000523628 C9orf129Q5T035 196 aaKnown RBP2.62□□□□□ -1.99
HDAC2-216ENST00000523628 FAM104BQ5XKR9 115 aa2.62□□□□□ -1.99
HDAC2-216ENST00000523628 TEX43Q6ZNM6 134 aa2.62□□□□□ -1.99
HDAC2-216ENST00000523628 C15orf56Q8N910 161 aa2.62□□□□□ -1.99
HDAC2-216ENST00000523628 PACRGQ96M98 296 aaPredicted RBP2.62□□□□□ -1.99
HDAC2-216ENST00000523628 LINC01600Q96MT4 127 aa2.62□□□□□ -1.99
HDAC2-216ENST00000523628 NXT2Q9NPJ8 142 aaKnown RBP2.62□□□□□ -1.99
HDAC2-216ENST00000523628 PSORS1C2Q9UIG4 136 aa2.62□□□□□ -1.99
HDAC2-216ENST00000523628 HSPG2P98160 4391 aa2.62□□□□□ -1.99
HDAC2-216ENST00000523628 LRP1BQ9NZR2 4599 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 IGLV1-50A0A075B6I6 118 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 A0A0J9YXV3 536 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 A0A0U1RQV1 116 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 K7EN84 100 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 NUPR1O60356 82 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 XCL1P47992 114 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 HERVK_113P63121 156 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 COX6A2Q02221 97 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 ADIRFQ15847 76 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 CLPSL2Q6UWE3 100 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 ALKAL2Q6UX46 152 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 AMN1Q8IY45 258 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 LINC00526Q96FQ7 95 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 TMEM141Q96I45 108 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 SMIM2Q9BVW6 85 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 MAP1LC3AQ9H492 121 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 CYSLTR1Q9Y271 337 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 CARHSP1Q9Y2V2 147 aaKnown RBP2.61□□□□□ -1.99
HDAC2-216ENST00000523628 UBE2D4Q9Y2X8 147 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 MYCBP2O75592 4640 aa2.61□□□□□ -1.99
HDAC2-216ENST00000523628 DYNC1H1Q14204 4646 aaKnown RBP2.61□□□□□ -1.99
HDAC2-216ENST00000523628 IGLV8-61A0A075B6I0 122 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 TRAV26-2A0A0B4J265 109 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 MUC21A0A0G2JKD1 596 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 MUC21A0A140T8X8 626 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 E9PLD3 99 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 MT-ND6P03923 174 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 S100PP25815 95 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 KRTAP10-4P60372 401 aaPredicted RBP2.6□□□□□ -1.99
HDAC2-216ENST00000523628 SPAG11BQ08648 103 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 PRR4Q16378 134 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 UQCC3Q6UW78 93 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 C2orf66Q6UXQ4 117 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 NUP35Q8NFH5 326 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 TIMM17AQ99595 171 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 TMEM242Q9NWH2 141 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 TP73-AS1Q9UF72 201 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 V9GYV3 84 aa2.6□□□□□ -1.99
HDAC2-216ENST00000523628 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.59□□□□□ -1.99
HDAC2-216ENST00000523628 IGHV3OR16-9A0A0B4J2B5 98 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 IGKV2-24A0A0C4DH68 120 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 IGKV3OR2-268A0A0C4DH90 116 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 IGKV2-29A2NJV5 120 aaPredicted RBP2.59□□□□□ -1.99
HDAC2-216ENST00000523628 LINC00587B1AMM8 73 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 NDUFC2-KCTD14E9PQ53 114 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 SRP19P09132 144 aaKnown RBP2.59□□□□□ -1.99
HDAC2-216ENST00000523628 HNRNPA3P51991 378 aaKnown RBP2.59□□□□□ -1.99
HDAC2-216ENST00000523628 CKS1BP61024 79 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 RPL23P62829 140 aaKnown RBP2.59□□□□□ -1.99
HDAC2-216ENST00000523628 S100A12P80511 92 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 FA2HQ7L5A8 372 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 FAM19A3Q7Z5A8 133 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 Q8IZM0 81 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 RPL39LQ96EH5 51 aaKnown RBP2.59□□□□□ -1.99
HDAC2-216ENST00000523628 VCX2Q9H322 139 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 CBY1Q9Y3M2 126 aa2.59□□□□□ -1.99
HDAC2-216ENST00000523628 A0A096LNI7 61 aa2.58□□□□□ -2
HDAC2-216ENST00000523628 TRAV13-1A0A0B4J241 112 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms