RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ALG5Q9Y673 324 aa3.52□□□□□ -1.85
VPS13B-211ENST00000522802 A0A1B0GV50 99 aa3.51□□□□□ -1.85
VPS13B-211ENST00000522802 I3L3M4 83 aa3.51□□□□□ -1.85
VPS13B-211ENST00000522802 SSNA1O43805 119 aa3.51□□□□□ -1.85
VPS13B-211ENST00000522802 BCE1O60756 84 aa3.51□□□□□ -1.85
VPS13B-211ENST00000522802 PMCHP20382 165 aa3.51□□□□□ -1.85
VPS13B-211ENST00000522802 FP248Q71RG6 208 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-211ENST00000522802 C7orf77A4D0Y5 90 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 NDUFC2-KCTD14E9PQ53 114 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 F2Z2F3 143 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 RPL35P42766 123 aaKnown RBP3.5□□□□□ -1.85
VPS13B-211ENST00000522802 RPS20P60866 119 aaKnown RBP3.5□□□□□ -1.85
VPS13B-211ENST00000522802 FAM229BQ4G0N7 80 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 CENPWQ5EE01 88 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 AKR1C8PQ5T2L2 129 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 C2orf82Q6UX34 121 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 KRTAP13-1Q8IUC0 172 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 C3orf22Q8N5N4 141 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 ENKURQ8TC29 256 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 CNFNQ9BYD5 112 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 VCX2Q9H322 139 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 UBE2D4Q9Y2X8 147 aa3.5□□□□□ -1.85
VPS13B-211ENST00000522802 IGKV2D-26A0A0A0MRZ7 120 aa3.49□□□□□ -1.85
VPS13B-211ENST00000522802 TRBV6-5A0A0K0K1A5 114 aa3.49□□□□□ -1.85
VPS13B-211ENST00000522802 C22orf24Q9Y442 160 aa3.49□□□□□ -1.85
VPS13B-211ENST00000522802 IGHV3OR16-9A0A0B4J2B5 98 aa3.48□□□□□ -1.85
VPS13B-211ENST00000522802 PFDN1O60925 122 aa3.48□□□□□ -1.85
VPS13B-211ENST00000522802 IFNA1P01562 189 aa3.48□□□□□ -1.85
VPS13B-211ENST00000522802 KIAA0087Q14695 138 aa3.48□□□□□ -1.85
VPS13B-211ENST00000522802 TMEM241Q24JQ0 296 aa3.48□□□□□ -1.85
VPS13B-211ENST00000522802 Q5BKY6 102 aa3.48□□□□□ -1.85
VPS13B-211ENST00000522802 C9orf62Q8N4C0 152 aa3.48□□□□□ -1.85
VPS13B-211ENST00000522802 XAGE1AQ9HD64 81 aa3.48□□□□□ -1.85
VPS13B-211ENST00000522802 TRBV20OR9-2A0A075B6H5 130 aa3.47□□□□□ -1.85
VPS13B-211ENST00000522802 BORCS7-ASMTA0A0B4J1R7 106 aa3.47□□□□□ -1.85
VPS13B-211ENST00000522802 TRBV27A0A0K0K1C4 114 aa3.47□□□□□ -1.85
VPS13B-211ENST00000522802 M0R2T5 61 aa3.47□□□□□ -1.85
VPS13B-211ENST00000522802 MRPL55Q7Z7F7 128 aaKnown RBP3.47□□□□□ -1.85
VPS13B-211ENST00000522802 FAM104AQ969W3 186 aa3.47□□□□□ -1.85
VPS13B-211ENST00000522802 ST20Q9HBF5 79 aa3.47□□□□□ -1.85
VPS13B-211ENST00000522802 CSDC2Q9Y534 153 aaKnown RBP3.47□□□□□ -1.85
VPS13B-211ENST00000522802 TRBV30A0A0K0K1B3 111 aa3.46□□□□□ -1.86
VPS13B-211ENST00000522802 RAB19A4D1S5 217 aa3.46□□□□□ -1.86
VPS13B-211ENST00000522802 UBE2AP49459 152 aa3.46□□□□□ -1.86
VPS13B-211ENST00000522802 POLR2KP53803 58 aaKnown RBP3.46□□□□□ -1.86
VPS13B-211ENST00000522802 IFITM3Q01628 133 aa3.46□□□□□ -1.86
VPS13B-211ENST00000522802 MARVELD1Q9BSK0 173 aa3.46□□□□□ -1.86
VPS13B-211ENST00000522802 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
VPS13B-211ENST00000522802 FCER1GP30273 86 aa3.45□□□□□ -1.86
VPS13B-211ENST00000522802 GNG4P50150 75 aa3.45□□□□□ -1.86
VPS13B-211ENST00000522802 PRLHP81277 87 aa3.45□□□□□ -1.86
VPS13B-211ENST00000522802 TEX261Q6UWH6 196 aa3.45□□□□□ -1.86
VPS13B-211ENST00000522802 FAM213BQ8TBF2 198 aa3.45□□□□□ -1.86
VPS13B-211ENST00000522802 SFT2D1Q8WV19 159 aa3.45□□□□□ -1.86
VPS13B-211ENST00000522802 PACRGQ96M98 296 aaPredicted RBP3.45□□□□□ -1.86
VPS13B-211ENST00000522802 TP73-AS1Q9UF72 201 aa3.45□□□□□ -1.86
VPS13B-211ENST00000522802 NEBP20929 6669 aa3.45□□□□□ -1.86
VPS13B-211ENST00000522802 FXYD6-FXYD2A0A087WZ82 144 aa3.44□□□□□ -1.86
VPS13B-211ENST00000522802 KRTAP4-16G5E9R7 235 aaPredicted RBP3.44□□□□□ -1.86
VPS13B-211ENST00000522802 SMKR1H3BMG3 65 aa3.44□□□□□ -1.86
VPS13B-211ENST00000522802 UPK1BO75841 260 aa3.44□□□□□ -1.86
VPS13B-211ENST00000522802 RPL39P62891 51 aaKnown RBP3.44□□□□□ -1.86
VPS13B-211ENST00000522802 Q1RN00 199 aa3.44□□□□□ -1.86
VPS13B-211ENST00000522802 KCNRGQ8N5I3 272 aa3.44□□□□□ -1.86
VPS13B-211ENST00000522802 LINC00167Q96N53 147 aa3.44□□□□□ -1.86
VPS13B-211ENST00000522802 CYTL1Q9NRR1 136 aa3.44□□□□□ -1.86
VPS13B-211ENST00000522802 DHRS4-AS1Q9P1J3 65 aa3.44□□□□□ -1.86
VPS13B-211ENST00000522802 IGLV8-61A0A075B6I0 122 aa3.43□□□□□ -1.86
VPS13B-211ENST00000522802 ZNF727A8MUV8 499 aa3.43□□□□□ -1.86
VPS13B-211ENST00000522802 S100A12P80511 92 aa3.43□□□□□ -1.86
VPS13B-211ENST00000522802 PCOTHQ58A44 107 aa3.43□□□□□ -1.86
VPS13B-211ENST00000522802 SMIM15Q7Z3B0 74 aa3.43□□□□□ -1.86
VPS13B-211ENST00000522802 DAND5Q8N907 189 aa3.43□□□□□ -1.86
VPS13B-211ENST00000522802 MBD3L1Q8WWY6 194 aa3.43□□□□□ -1.86
VPS13B-211ENST00000522802 TIMM21Q9BVV7 248 aa3.43□□□□□ -1.86
VPS13B-211ENST00000522802 IGKV2-28A0A075B6P5 120 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 TGIF2-C20orf24A0A0A6YYL0 155 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 K7EN84 100 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 SCO1O75880 301 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 IGKV2D-28P01615 120 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 RAB14P61106 215 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 HERV-K104P63124 156 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 HBBP68871 147 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 CCL20P78556 96 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 SPAG11AQ6PDA7 123 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 AKAP14Q86UN6 197 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 LINC00518Q8N0U6 118 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 SMIM12Q96EX1 92 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 GNG13Q9P2W3 67 aa3.42□□□□□ -1.86
VPS13B-211ENST00000522802 A0A1B0GVG6 124 aa3.41□□□□□ -1.86
VPS13B-211ENST00000522802 PCP4L1A6NKN8 68 aa3.41□□□□□ -1.86
VPS13B-211ENST00000522802 RPL32P62910 135 aaKnown RBP3.41□□□□□ -1.86
VPS13B-211ENST00000522802 SMAGPQ0VAQ4 97 aa3.41□□□□□ -1.86
VPS13B-211ENST00000522802 AMN1Q8IY45 258 aa3.41□□□□□ -1.86
VPS13B-211ENST00000522802 TMEM238C9JI98 176 aa3.4□□□□□ -1.87
VPS13B-211ENST00000522802 RAB4AP20338 218 aa3.4□□□□□ -1.87
VPS13B-211ENST00000522802 PLEKHB2Q96CS7 222 aa3.4□□□□□ -1.87
VPS13B-211ENST00000522802 KIR2DL4Q99706 377 aa3.4□□□□□ -1.87
VPS13B-211ENST00000522802 MANBALQ9NQG1 85 aa3.4□□□□□ -1.87
VPS13B-211ENST00000522802 SPANXA1Q9NS26 97 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms