RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CLEC19AQ6UXS0 136 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 ZFAND2AQ8N6M9 145 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 Q8TAT8 98 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 RPL39LQ96EH5 51 aaKnown RBP1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 EP300Q09472 2414 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 CEP250Q9BV73 2442 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 ZZEF1O43149 2961 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 DOPEY2Q9Y3R5 2298 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 ZFHX4Q86UP3 3567 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 SPTBN1Q01082 2364 aaKnown RBP1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 SMIM26A0A096LP01 95 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 COX7A2LO14548 114 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 LY6HO94772 140 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 TLX1NBP0CAT3 122 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 PRB4P10163 310 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 RNASE3P12724 160 aaKnown RBP1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 PRR9Q5T870 116 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 SPANXN1Q5VSR9 72 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 Q6ZRU5 148 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 DAZ4Q86SG3 579 aaKnown RBP1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 RNF182Q8N6D2 247 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 C15orf56Q8N910 161 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 C10orf105Q8TEF2 133 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 DAZ1Q9NQZ3 744 aaKnown RBP1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 S4R3C0 116 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 TTC28Q96AY4 2481 aa1.9□□□□□ -2.11
HMGB1P41-201ENST00000520234 ZFHX2Q9C0A1 2572 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 IGHV3-74A0A0B4J1X5 117 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 TRBV10-3A0A0K0K1G6 114 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 FAM236DA0A1B0GTK5 79 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 SPRR5A0A1B0GTR4 108 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 A8MTW9 85 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 INAFM2P0DMQ5 153 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 IGHV3-30-3P0DP02 117 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 FAM236CP0DP71 79 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 RPL28P46779 137 aaKnown RBP1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 XCL1P47992 114 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 NPC2P61916 151 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 RPL39P62891 51 aaKnown RBP1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 SOSTDC1Q6X4U4 206 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 LINC00467Q9BRT7 94 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 BPESC1Q9GZL8 116 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 LINC00846Q9NV44 126 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 V9GYY9 64 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 ZFHX3Q15911 3703 aa1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 ANKRD11Q6UB99 2663 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P41-201ENST00000520234 AKAP13Q12802 2813 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 APC2O95996 2303 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 A0A087WVE0 104 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 IGHV1-58A0A0C4DH39 117 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 A0A1B0GVX0 72 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 B4DSR2 109 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 H7C2G1 150 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 M0QY20 66 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 NDUFA1O15239 70 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 GNRH2O43555 120 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 CCKP06307 115 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 COX6CP09669 75 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 BAALC-AS2P0C853 105 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 LGALS3P17931 250 aaKnown RBP1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 SYNJ2BPP57105 145 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 BLCAPP62952 87 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 ATP5EP2Q5VTU8 51 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 UNQ9165/PRO28630Q6UXU0 137 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 FAM19A3Q7Z5A8 133 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 ZNF625Q96I27 306 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 RHPN1-AS1Q9BWJ2 59 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 PHLDA3Q9Y5J5 127 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 MUC3AQ02505 3323 aa1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 MAP1BP46821 2468 aaKnown RBP1.88□□□□□ -2.11
HMGB1P41-201ENST00000520234 ANKHD1Q8IWZ3 2542 aaKnown RBP1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 GVINP1Q7Z2Y8 2422 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 WDFY4Q6ZS81 3184 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 TRAV7A0A075B6U4 112 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 IGHV3OR16-8A0A075B7F1 116 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 A0A096LNT2 108 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 TRAV8-3A0A0A6YYJ7 113 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 TRBV7-6A0A0J9YX20 115 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 A0A0J9YXV3 536 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 C19orf84I3L1E1 186 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 LOC400499M0QZD8 3231 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 TACC2O95359 2948 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 TRBV12-3P01733 135 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 MSMBP08118 114 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 S100A4P26447 101 aaKnown RBP1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 SNRPD3P62318 126 aaKnown RBP1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 C1orf195Q5TG92 126 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 RIF1Q5UIP0 2472 aaKnown RBP1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 Q5W150 140 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 PRR15Q8IV56 129 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 LINC00308Q8TCZ7 52 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 UBE2E2Q96LR5 201 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 LINC00474Q9P2X8 69 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 NDUFA12Q9UI09 145 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 PKIGQ9Y2B9 76 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 SORL1Q92673 2214 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 CELSR3Q9NYQ7 3312 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 SPTA1P02549 2419 aa1.87□□□□□ -2.11
HMGB1P41-201ENST00000520234 TLN1Q9Y490 2541 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms