RNA–Protein interactions for RNA: ENST00000519885.5

TRAPPC2-208, Transcript of trafficking protein particle complex 2, humanhuman

TSL 3 BASIC

Gene TRAPPC2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-208ENST00000519885 OPRPNQ99935 248 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC2-208ENST00000519885 MRPL35Q9NZE8 188 aaKnown RBP3.35□□□□□ -1.87
TRAPPC2-208ENST00000519885 TRRAPQ9Y4A5 3859 aa3.35□□□□□ -1.87
TRAPPC2-208ENST00000519885 LOC100131303A0A0U1RQF7 123 aa3.34□□□□□ -1.87
TRAPPC2-208ENST00000519885 TMEM238C9JI98 176 aa3.34□□□□□ -1.87
TRAPPC2-208ENST00000519885 LGALS3P17931 250 aaKnown RBP3.34□□□□□ -1.87
TRAPPC2-208ENST00000519885 RBX1P62877 108 aa3.34□□□□□ -1.87
TRAPPC2-208ENST00000519885 C14orf177Q52M58 125 aa3.34□□□□□ -1.87
TRAPPC2-208ENST00000519885 SPATA45Q537H7 98 aa3.34□□□□□ -1.87
TRAPPC2-208ENST00000519885 MPV17L2Q567V2 206 aa3.34□□□□□ -1.87
TRAPPC2-208ENST00000519885 NTM-AS1Q6ZSK4 140 aa3.34□□□□□ -1.87
TRAPPC2-208ENST00000519885 PRR34Q9NV39 138 aa3.34□□□□□ -1.87
TRAPPC2-208ENST00000519885 NACAE9PAV3 2078 aa3.34□□□□□ -1.88
TRAPPC2-208ENST00000519885 NOTCH3Q9UM47 2321 aa3.33□□□□□ -1.88
TRAPPC2-208ENST00000519885 TRAV13-1A0A0B4J241 112 aa3.33□□□□□ -1.88
TRAPPC2-208ENST00000519885 IGHV1-58A0A0C4DH39 117 aa3.33□□□□□ -1.88
TRAPPC2-208ENST00000519885 MYMXA0A1B0GTQ4 84 aa3.33□□□□□ -1.88
TRAPPC2-208ENST00000519885 RPL37AP8A6NKH3 93 aa3.33□□□□□ -1.88
TRAPPC2-208ENST00000519885 COX7A2LO14548 114 aa3.33□□□□□ -1.88
TRAPPC2-208ENST00000519885 COX8AP10176 69 aa3.33□□□□□ -1.88
TRAPPC2-208ENST00000519885 SCGB1D4Q6XE38 83 aa3.33□□□□□ -1.88
TRAPPC2-208ENST00000519885 Q8IZM0 81 aa3.33□□□□□ -1.88
TRAPPC2-208ENST00000519885 MIEN1Q9BRT3 115 aa3.33□□□□□ -1.88
TRAPPC2-208ENST00000519885 COL6A5A8TX70 2615 aa3.33□□□□□ -1.88
TRAPPC2-208ENST00000519885 IGLV4-69A0A075B6H9 119 aa3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 LINC00959A0A1B0GUT2 108 aa3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 A0A1B0GWB2 263 aa3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 J3QQQ9 107 aa3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 LEPROTO15243 131 aa3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 TIMM17BO60830 172 aa3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 ZNF22P17026 224 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 COX17Q14061 63 aa3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 TAL2Q16559 108 aa3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 LINC00173Q6ZV60 143 aa3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 HIGD1BQ9P298 99 aa3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 CBY1Q9Y3M2 126 aa3.32□□□□□ -1.88
TRAPPC2-208ENST00000519885 IGHV3OR16-9A0A0B4J2B5 98 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 A0A0J9YXY3 114 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 TMEM223A0PJW6 202 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 A6NDN8 102 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 ZNF815PA8K554 130 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 IBA57-AS1B1ANH7 110 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 NDUFA1O15239 70 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 CFC1BP0CG36 223 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 CFC1P0CG37 223 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 IFITM1P13164 125 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 CKS1BP61024 79 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 ZFAND6Q6FIF0 208 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 LINC00269Q8N2A0 174 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 Q8N976 141 aa3.31□□□□□ -1.88
TRAPPC2-208ENST00000519885 STAB1Q9NY15 2570 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 IGLV4-60A0A075B6I1 120 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 A0A0J9YXV3 536 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 EPM2AB3EWF7 344 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 PSCAO43653 123 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 IGHV3-30-3P0DP02 117 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 DDTP30046 118 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 XCL1P47992 114 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 HSD52Q0P140 79 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 ESRGQ1W209 222 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 LYRM7Q5U5X0 104 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 WFDC10BQ8IUB3 73 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 ATOH7Q8N100 152 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 CHCHD10Q8WYQ3 142 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 UBE2WQ96B02 151 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 SPANXB1Q9NS25 103 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 CDKN2A-AS1Q9UH64 79 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 NDUFA12Q9UI09 145 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 KLK12Q9UKR0 248 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 LINC00588Q9Y4M8 146 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 TENM1Q9UKZ4 2725 aa3.3□□□□□ -1.88
TRAPPC2-208ENST00000519885 IGHV3-64A0A075B6Q5 118 aa3.29□□□□□ -1.88
TRAPPC2-208ENST00000519885 IGKV3OR2-268A0A0C4DH90 116 aa3.29□□□□□ -1.88
TRAPPC2-208ENST00000519885 TRBV30A0A0K0K1B3 111 aa3.29□□□□□ -1.88
TRAPPC2-208ENST00000519885 IGHV3-30P01768 117 aa3.29□□□□□ -1.88
TRAPPC2-208ENST00000519885 IGHV3-33P01772 117 aa3.29□□□□□ -1.88
TRAPPC2-208ENST00000519885 IGHV3-30-5P0DP03 117 aa3.29□□□□□ -1.88
TRAPPC2-208ENST00000519885 REG3GQ6UW15 175 aa3.29□□□□□ -1.88
TRAPPC2-208ENST00000519885 COX7B2Q8TF08 81 aa3.29□□□□□ -1.88
TRAPPC2-208ENST00000519885 Q9UF83 564 aa3.29□□□□□ -1.88
TRAPPC2-208ENST00000519885 APLNQ9ULZ1 77 aa3.29□□□□□ -1.88
TRAPPC2-208ENST00000519885 DNAH3Q8TD57 4116 aa3.29□□□□□ -1.88
TRAPPC2-208ENST00000519885 IGKV2D-24A0A075B6R9 120 aa3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 GVQW2A0A096LPI5 108 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 SPAG11BQ08648 103 aa3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 RNASE13Q5GAN3 156 aaKnown RBP3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 MEIG1Q5JSS6 88 aa3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 ORAOV1Q8WV07 137 aa3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 HIST1H4GQ99525 98 aa3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 SPANXDQ9BXN6 97 aa3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 SPANXCQ9NY87 97 aa3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 TP73-AS1Q9UF72 201 aa3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 VWFP04275 2813 aa3.28□□□□□ -1.88
TRAPPC2-208ENST00000519885 NBDYA0A0U1RRE5 68 aa3.27□□□□□ -1.89
TRAPPC2-208ENST00000519885 SPINK8P0C7L1 97 aa3.27□□□□□ -1.89
TRAPPC2-208ENST00000519885 ENHOQ6UWT2 76 aa3.27□□□□□ -1.89
TRAPPC2-208ENST00000519885 Q8N377 158 aa3.27□□□□□ -1.89
TRAPPC2-208ENST00000519885 C14orf144Q96I85 54 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms