RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 GCSHP23434 173 aa11.48□□□□□ -0.57
TRAM1-202ENST00000518678 SYCNQ0VAF6 134 aa11.48□□□□□ -0.57
TRAM1-202ENST00000518678 CAMK2N2Q96S95 79 aa11.48□□□□□ -0.57
TRAM1-202ENST00000518678 TOMM7Q9P0U1 55 aa11.48□□□□□ -0.57
TRAM1-202ENST00000518678 TMA7Q9Y2S6 64 aaKnown RBP11.48□□□□□ -0.57
TRAM1-202ENST00000518678 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
TRAM1-202ENST00000518678 COX7B2Q8TF08 81 aa11.47□□□□□ -0.57
TRAM1-202ENST00000518678 CARD19Q96LW7 228 aa11.47□□□□□ -0.57
TRAM1-202ENST00000518678 C6orf226Q5I0X4 101 aa11.46□□□□□ -0.57
TRAM1-202ENST00000518678 Q6ZRU5 148 aa11.46□□□□□ -0.57
TRAM1-202ENST00000518678 NDUFA1O15239 70 aa11.45□□□□□ -0.58
TRAM1-202ENST00000518678 LINC01620Q4KN68 170 aa11.45□□□□□ -0.58
TRAM1-202ENST00000518678 C20orf202A1L168 122 aa11.44□□□□□ -0.58
TRAM1-202ENST00000518678 KRTAP10-1P60331 282 aa11.44□□□□□ -0.58
TRAM1-202ENST00000518678 C2orf82Q6UX34 121 aa11.44□□□□□ -0.58
TRAM1-202ENST00000518678 UNQ6190/PRO20217Q6UXQ8 127 aa11.44□□□□□ -0.58
TRAM1-202ENST00000518678 CXCL5P42830 114 aa11.43□□□□□ -0.58
TRAM1-202ENST00000518678 CKS1BP61024 79 aa11.43□□□□□ -0.58
TRAM1-202ENST00000518678 RNF151Q2KHN1 245 aa11.43□□□□□ -0.58
TRAM1-202ENST00000518678 C10orf25Q5T742 122 aa11.43□□□□□ -0.58
TRAM1-202ENST00000518678 HERVK_113P61574 105 aa11.41□□□□□ -0.58
TRAM1-202ENST00000518678 SDIM1Q6ZPB5 146 aa11.41□□□□□ -0.58
TRAM1-202ENST00000518678 TRBV30A0A0K0K1B3 111 aa11.4□□□□□ -0.58
TRAM1-202ENST00000518678 AKR1D1P51857 326 aa11.4□□□□□ -0.58
TRAM1-202ENST00000518678 C6orf48Q9UBA6 75 aa11.4□□□□□ -0.58
TRAM1-202ENST00000518678 DNAH8Q96JB1 4490 aa11.4□□□□□ -0.58
TRAM1-202ENST00000518678 LEPROTO15243 131 aa11.38□□□□□ -0.59
TRAM1-202ENST00000518678 PKIGQ9Y2B9 76 aa11.38□□□□□ -0.59
TRAM1-202ENST00000518678 PLEKHB2Q96CS7 222 aa11.37□□□□□ -0.59
TRAM1-202ENST00000518678 LOC107984640A0A0U1RRK4 108 aa11.36□□□□□ -0.59
TRAM1-202ENST00000518678 E9PLD3 99 aa11.36□□□□□ -0.59
TRAM1-202ENST00000518678 SFTA2Q6UW10 78 aa11.36□□□□□ -0.59
TRAM1-202ENST00000518678 STPG4Q8N801 248 aa11.36□□□□□ -0.59
TRAM1-202ENST00000518678 FAT1Q14517 4588 aa11.36□□□□□ -0.59
TRAM1-202ENST00000518678 TLX1NBP0CAT3 122 aa11.35□□□□□ -0.59
TRAM1-202ENST00000518678 C9orf116Q5BN46 136 aaPredicted RBP11.35□□□□□ -0.59
TRAM1-202ENST00000518678 Q6ZSA8 131 aa11.35□□□□□ -0.59
TRAM1-202ENST00000518678 ATOH7Q8N100 152 aa11.35□□□□□ -0.59
TRAM1-202ENST00000518678 ZNF625Q96I27 306 aaPredicted RBP11.35□□□□□ -0.59
TRAM1-202ENST00000518678 FAM30AQ9NZY2 134 aa11.35□□□□□ -0.59
TRAM1-202ENST00000518678 J3QQQ9 107 aa11.34□□□□□ -0.59
TRAM1-202ENST00000518678 TSPEAR-AS2P59090 65 aa11.34□□□□□ -0.59
TRAM1-202ENST00000518678 A0A096LNI7 61 aa11.33□□□□□ -0.6
TRAM1-202ENST00000518678 NDUFC2-KCTD14E9PQ53 114 aa11.32□□□□□ -0.6
TRAM1-202ENST00000518678 SCGB1D1O95968 90 aa11.32□□□□□ -0.6
TRAM1-202ENST00000518678 CIRBPQ14011 172 aaKnown RBP11.32□□□□□ -0.6
TRAM1-202ENST00000518678 NDUFA12Q9UI09 145 aa11.32□□□□□ -0.6
TRAM1-202ENST00000518678 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.32□□□□□ -0.6
TRAM1-202ENST00000518678 PANO1I0J062 215 aa11.31□□□□□ -0.6
TRAM1-202ENST00000518678 CHTF8P0CG12 524 aa11.31□□□□□ -0.6
TRAM1-202ENST00000518678 LGALS3P17931 250 aaKnown RBP11.31□□□□□ -0.6
TRAM1-202ENST00000518678 PTTG1IPP53801 180 aa11.31□□□□□ -0.6
TRAM1-202ENST00000518678 RPL18AQ02543 176 aaKnown RBP11.31□□□□□ -0.6
TRAM1-202ENST00000518678 IGKV2-24A0A0C4DH68 120 aa11.3□□□□□ -0.6
TRAM1-202ENST00000518678 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
TRAM1-202ENST00000518678 NMUP48645 174 aa11.3□□□□□ -0.6
TRAM1-202ENST00000518678 HERV-K104P63124 156 aa11.3□□□□□ -0.6
TRAM1-202ENST00000518678 GAGE2BQ13066 116 aa11.3□□□□□ -0.6
TRAM1-202ENST00000518678 Q6ZRP5 223 aa11.3□□□□□ -0.6
TRAM1-202ENST00000518678 SPACA4Q8TDM5 124 aa11.3□□□□□ -0.6
TRAM1-202ENST00000518678 IGKV2D-26A0A0A0MRZ7 120 aa11.29□□□□□ -0.6
TRAM1-202ENST00000518678 CDK2AP2O75956 126 aa11.29□□□□□ -0.6
TRAM1-202ENST00000518678 ANKRD39Q53RE8 183 aa11.29□□□□□ -0.6
TRAM1-202ENST00000518678 LINC00474Q9P2X8 69 aa11.29□□□□□ -0.6
TRAM1-202ENST00000518678 JOSD1Q15040 202 aaPredicted RBP11.28□□□□□ -0.6
TRAM1-202ENST00000518678 ERG28Q9UKR5 140 aa11.28□□□□□ -0.6
TRAM1-202ENST00000518678 XGP55808 180 aa11.27□□□□□ -0.61
TRAM1-202ENST00000518678 COX17Q14061 63 aa11.27□□□□□ -0.61
TRAM1-202ENST00000518678 MAJINQ3KP22 176 aa11.27□□□□□ -0.61
TRAM1-202ENST00000518678 PFN2P35080 140 aa11.26□□□□□ -0.61
TRAM1-202ENST00000518678 GAGE2EQ4V326 116 aa11.26□□□□□ -0.61
TRAM1-202ENST00000518678 GAGE2DQ9UEU5 116 aa11.26□□□□□ -0.61
TRAM1-202ENST00000518678 HSBP1L1C9JCN9 74 aa11.25□□□□□ -0.61
TRAM1-202ENST00000518678 SCXQ7RTU7 201 aa11.25□□□□□ -0.61
TRAM1-202ENST00000518678 DPH3Q96FX2 82 aa11.25□□□□□ -0.61
TRAM1-202ENST00000518678 HAMPP81172 84 aa11.24□□□□□ -0.61
TRAM1-202ENST00000518678 CIRBP-AS1Q8TBR5 109 aa11.24□□□□□ -0.61
TRAM1-202ENST00000518678 A0A087WYN8 130 aa11.23□□□□□ -0.61
TRAM1-202ENST00000518678 LINC00587B1AMM8 73 aa11.23□□□□□ -0.61
TRAM1-202ENST00000518678 MEIG1Q5JSS6 88 aa11.23□□□□□ -0.61
TRAM1-202ENST00000518678 TTTY13Q9BZ97 58 aa11.23□□□□□ -0.61
TRAM1-202ENST00000518678 SMIM13P0DJ93 91 aa11.22□□□□□ -0.61
TRAM1-202ENST00000518678 LINC00158P58513 81 aa11.22□□□□□ -0.61
TRAM1-202ENST00000518678 C9orf129Q5T035 196 aaKnown RBP11.22□□□□□ -0.61
TRAM1-202ENST00000518678 PLAC8Q9NZF1 115 aa11.22□□□□□ -0.61
TRAM1-202ENST00000518678 A0A0J9YXY3 114 aa11.21□□□□□ -0.61
TRAM1-202ENST00000518678 ZNF815PA8K554 130 aa11.21□□□□□ -0.61
TRAM1-202ENST00000518678 PYY3Q5JQD4 70 aa11.21□□□□□ -0.61
TRAM1-202ENST00000518678 Q8N1X5 172 aa11.21□□□□□ -0.61
TRAM1-202ENST00000518678 XAGE1AQ9HD64 81 aa11.21□□□□□ -0.61
TRAM1-202ENST00000518678 VPS13BQ7Z7G8 4022 aa11.21□□□□□ -0.62
TRAM1-202ENST00000518678 A0A0U1RRA0 63 aa11.2□□□□□ -0.62
TRAM1-202ENST00000518678 A0A1W2PNN7 141 aa11.19□□□□□ -0.62
TRAM1-202ENST00000518678 EPM2AB3EWF7 344 aa11.19□□□□□ -0.62
TRAM1-202ENST00000518678 PCP2Q8IVA1 136 aa11.19□□□□□ -0.62
TRAM1-202ENST00000518678 SND1-IT1Q9HBX3 110 aa11.19□□□□□ -0.62
TRAM1-202ENST00000518678 FAM168BA1KXE4 195 aa11.17□□□□□ -0.62
TRAM1-202ENST00000518678 MIR7-3HGQ8N6C7 128 aa11.17□□□□□ -0.62
TRAM1-202ENST00000518678 VAMP8Q9BV40 100 aa11.16□□□□□ -0.62
TRAM1-202ENST00000518678 HERC1Q15751 4861 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms