RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 TMEM141Q96I45 108 aa5.25□□□□□ -1.57
LINCR-0001-201ENST00000517732 PPDPFQ9H3Y8 114 aa5.25□□□□□ -1.57
LINCR-0001-201ENST00000517732 ANAPC11Q9NYG5 84 aa5.25□□□□□ -1.57
LINCR-0001-201ENST00000517732 RPL37AP8A6NKH3 93 aa5.24□□□□□ -1.57
LINCR-0001-201ENST00000517732 D6R8Y8 96 aa5.24□□□□□ -1.57
LINCR-0001-201ENST00000517732 S100A8P05109 93 aa5.24□□□□□ -1.57
LINCR-0001-201ENST00000517732 BLOC1S1P78537 153 aa5.24□□□□□ -1.57
LINCR-0001-201ENST00000517732 LINC00337Q8N6G1 96 aa5.24□□□□□ -1.57
LINCR-0001-201ENST00000517732 ALKBH7Q9BT30 221 aaPredicted RBP5.24□□□□□ -1.57
LINCR-0001-201ENST00000517732 PYGO1Q9Y3Y4 419 aa5.24□□□□□ -1.57
LINCR-0001-201ENST00000517732 IGLV4-3A0A075B6K6 122 aa5.23□□□□□ -1.57
LINCR-0001-201ENST00000517732 F8W036 122 aa5.23□□□□□ -1.57
LINCR-0001-201ENST00000517732 NKAPP1Q8N9T2 125 aa5.23□□□□□ -1.57
LINCR-0001-201ENST00000517732 LINC00167Q96N53 147 aa5.23□□□□□ -1.57
LINCR-0001-201ENST00000517732 EIF5A2Q9GZV4 153 aaKnown RBP5.23□□□□□ -1.57
LINCR-0001-201ENST00000517732 V9GYV3 84 aa5.23□□□□□ -1.57
LINCR-0001-201ENST00000517732 F8VRH5 84 aa5.22□□□□□ -1.57
LINCR-0001-201ENST00000517732 NPYP01303 97 aa5.22□□□□□ -1.57
LINCR-0001-201ENST00000517732 PPBPP02775 128 aa5.22□□□□□ -1.57
LINCR-0001-201ENST00000517732 CXCL5P42830 114 aa5.22□□□□□ -1.57
LINCR-0001-201ENST00000517732 FAM74A3Q4VXF1 159 aa5.22□□□□□ -1.57
LINCR-0001-201ENST00000517732 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
LINCR-0001-201ENST00000517732 GAGE10A6NGK3 116 aa5.21□□□□□ -1.58
LINCR-0001-201ENST00000517732 SEC11AP67812 179 aa5.21□□□□□ -1.58
LINCR-0001-201ENST00000517732 SRSF3P84103 164 aaKnown RBP5.21□□□□□ -1.58
LINCR-0001-201ENST00000517732 SPAG11AQ6PDA7 123 aa5.21□□□□□ -1.58
LINCR-0001-201ENST00000517732 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.58
LINCR-0001-201ENST00000517732 VCX2Q9H322 139 aa5.21□□□□□ -1.58
LINCR-0001-201ENST00000517732 SEC61BP60468 96 aaKnown RBP5.2□□□□□ -1.58
LINCR-0001-201ENST00000517732 HERVK_113P63121 156 aa5.2□□□□□ -1.58
LINCR-0001-201ENST00000517732 PNRC1Q12796 327 aaPredicted RBP5.2□□□□□ -1.58
LINCR-0001-201ENST00000517732 ORMDL3Q8N138 153 aa5.2□□□□□ -1.58
LINCR-0001-201ENST00000517732 CYSLTR1Q9Y271 337 aa5.2□□□□□ -1.58
LINCR-0001-201ENST00000517732 SMIM27A0A1W2PRY6 76 aa5.19□□□□□ -1.58
LINCR-0001-201ENST00000517732 ASB16-AS1Q495Z4 193 aa5.19□□□□□ -1.58
LINCR-0001-201ENST00000517732 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
LINCR-0001-201ENST00000517732 MRPL54Q6P161 138 aaKnown RBP5.19□□□□□ -1.58
LINCR-0001-201ENST00000517732 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
LINCR-0001-201ENST00000517732 GEMIN7Q9H840 131 aaKnown RBP5.19□□□□□ -1.58
LINCR-0001-201ENST00000517732 NPSP0C0P6 89 aa5.18□□□□□ -1.58
LINCR-0001-201ENST00000517732 ADIRFQ15847 76 aa5.18□□□□□ -1.58
LINCR-0001-201ENST00000517732 PAPPA-AS1Q5QFB9 102 aa5.18□□□□□ -1.58
LINCR-0001-201ENST00000517732 C2orf66Q6UXQ4 117 aa5.18□□□□□ -1.58
LINCR-0001-201ENST00000517732 FAM19A1Q7Z5A9 133 aa5.18□□□□□ -1.58
LINCR-0001-201ENST00000517732 PRELID3AQ96N28 172 aa5.18□□□□□ -1.58
LINCR-0001-201ENST00000517732 AMELXQ99217 191 aa5.18□□□□□ -1.58
LINCR-0001-201ENST00000517732 IGLV5-37A0A075B6J1 123 aa5.17□□□□□ -1.58
LINCR-0001-201ENST00000517732 IGKV2-28A0A075B6P5 120 aa5.17□□□□□ -1.58
LINCR-0001-201ENST00000517732 IGKV2D-28P01615 120 aa5.17□□□□□ -1.58
LINCR-0001-201ENST00000517732 SRP19P09132 144 aaKnown RBP5.17□□□□□ -1.58
LINCR-0001-201ENST00000517732 RPL23P62829 140 aaKnown RBP5.17□□□□□ -1.58
LINCR-0001-201ENST00000517732 PRLHP81277 87 aa5.17□□□□□ -1.58
LINCR-0001-201ENST00000517732 ZC2HC1BQ5TFG8 222 aa5.17□□□□□ -1.58
LINCR-0001-201ENST00000517732 ALKAL2Q6UX46 152 aa5.17□□□□□ -1.58
LINCR-0001-201ENST00000517732 TMEM136Q6ZRR5 245 aa5.17□□□□□ -1.58
LINCR-0001-201ENST00000517732 FAM19A3Q7Z5A8 133 aa5.17□□□□□ -1.58
LINCR-0001-201ENST00000517732 MAP1LC3AQ9H492 121 aa5.17□□□□□ -1.58
LINCR-0001-201ENST00000517732 LOC389332A0A1B0GUA5 103 aa5.16□□□□□ -1.58
LINCR-0001-201ENST00000517732 A0A1B0GVG6 124 aa5.16□□□□□ -1.58
LINCR-0001-201ENST00000517732 ORMDL2Q53FV1 153 aa5.16□□□□□ -1.58
LINCR-0001-201ENST00000517732 TCTE3Q8IZS6 198 aa5.16□□□□□ -1.58
LINCR-0001-201ENST00000517732 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
LINCR-0001-201ENST00000517732 CDKN2A-AS1Q9UH64 79 aa5.16□□□□□ -1.58
LINCR-0001-201ENST00000517732 NAT8Q9UHE5 227 aa5.16□□□□□ -1.58
LINCR-0001-201ENST00000517732 LAMTOR2Q9Y2Q5 125 aa5.16□□□□□ -1.58
LINCR-0001-201ENST00000517732 A0A1B0GXF2 115 aa5.15□□□□□ -1.59
LINCR-0001-201ENST00000517732 RAB5BP61020 215 aa5.15□□□□□ -1.59
LINCR-0001-201ENST00000517732 KRTAP13-3Q3SY46 172 aa5.15□□□□□ -1.59
LINCR-0001-201ENST00000517732 COX7B2Q8TF08 81 aa5.15□□□□□ -1.59
LINCR-0001-201ENST00000517732 GNB1LQ9BYB4 327 aa5.15□□□□□ -1.59
LINCR-0001-201ENST00000517732 NDUFA12Q9UI09 145 aa5.15□□□□□ -1.59
LINCR-0001-201ENST00000517732 K7EMI3 77 aa5.14□□□□□ -1.59
LINCR-0001-201ENST00000517732 G0S2P27469 103 aa5.14□□□□□ -1.59
LINCR-0001-201ENST00000517732 PDZD11Q5EBL8 140 aa5.14□□□□□ -1.59
LINCR-0001-201ENST00000517732 ATP5L2Q7Z4Y8 100 aa5.14□□□□□ -1.59
LINCR-0001-201ENST00000517732 CBLN2Q8IUK8 224 aa5.14□□□□□ -1.59
LINCR-0001-201ENST00000517732 Q8N8P6 123 aa5.14□□□□□ -1.59
LINCR-0001-201ENST00000517732 TMEM126AQ9H061 195 aa5.14□□□□□ -1.59
LINCR-0001-201ENST00000517732 PRSS47A8MTI9 375 aa5.13□□□□□ -1.59
LINCR-0001-201ENST00000517732 DAND5Q8N907 189 aa5.13□□□□□ -1.59
LINCR-0001-201ENST00000517732 PLEKHB2Q96CS7 222 aa5.13□□□□□ -1.59
LINCR-0001-201ENST00000517732 HIGD2AQ9BW72 106 aa5.13□□□□□ -1.59
LINCR-0001-201ENST00000517732 ZNF706Q9Y5V0 76 aaPredicted RBP5.13□□□□□ -1.59
LINCR-0001-201ENST00000517732 IGIPA6NJ69 53 aa5.12□□□□□ -1.59
LINCR-0001-201ENST00000517732 SMIM1B2RUZ4 78 aa5.12□□□□□ -1.59
LINCR-0001-201ENST00000517732 ATP5LO75964 103 aa5.12□□□□□ -1.59
LINCR-0001-201ENST00000517732 RPL24P83731 157 aaKnown RBP5.12□□□□□ -1.59
LINCR-0001-201ENST00000517732 FAM19A2Q8N3H0 131 aa5.12□□□□□ -1.59
LINCR-0001-201ENST00000517732 TIMM17AQ99595 171 aa5.12□□□□□ -1.59
LINCR-0001-201ENST00000517732 TMEM238C9JI98 176 aa5.11□□□□□ -1.59
LINCR-0001-201ENST00000517732 SCO1O75880 301 aa5.11□□□□□ -1.59
LINCR-0001-201ENST00000517732 SPINK1P00995 79 aa5.11□□□□□ -1.59
LINCR-0001-201ENST00000517732 CFC1BP0CG36 223 aa5.11□□□□□ -1.59
LINCR-0001-201ENST00000517732 Q8NBF4 154 aa5.11□□□□□ -1.59
LINCR-0001-201ENST00000517732 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
LINCR-0001-201ENST00000517732 NXT2Q9NPJ8 142 aaKnown RBP5.11□□□□□ -1.59
LINCR-0001-201ENST00000517732 TINCRA0A1B0GVN0 87 aa5.1□□□□□ -1.59
LINCR-0001-201ENST00000517732 M0R378 163 aa5.1□□□□□ -1.59
LINCR-0001-201ENST00000517732 PFN2P35080 140 aa5.1□□□□□ -1.59
LINCR-0001-201ENST00000517732 ANKRD39Q53RE8 183 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms