RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 ORAOV1Q8WV07 137 aa6.59□□□□□ -1.35
PDGFRB-203ENST00000517660 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.58□□□□□ -1.36
PDGFRB-203ENST00000517660 NUPR1O60356 82 aa6.58□□□□□ -1.36
PDGFRB-203ENST00000517660 LINC00310P59036 64 aa6.58□□□□□ -1.36
PDGFRB-203ENST00000517660 ALKBH7Q9BT30 221 aaPredicted RBP6.58□□□□□ -1.36
PDGFRB-203ENST00000517660 MRPL35Q9NZE8 188 aaKnown RBP6.58□□□□□ -1.36
PDGFRB-203ENST00000517660 IGLV4-3A0A075B6K6 122 aa6.57□□□□□ -1.36
PDGFRB-203ENST00000517660 A0A1W2PNN7 141 aa6.57□□□□□ -1.36
PDGFRB-203ENST00000517660 NDUFA1O15239 70 aa6.57□□□□□ -1.36
PDGFRB-203ENST00000517660 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
PDGFRB-203ENST00000517660 LINC00242Q5T6M2 205 aa6.57□□□□□ -1.36
PDGFRB-203ENST00000517660 Q6ZRP5 223 aa6.57□□□□□ -1.36
PDGFRB-203ENST00000517660 TMEM141Q96I45 108 aa6.57□□□□□ -1.36
PDGFRB-203ENST00000517660 CYSLTR1Q9Y271 337 aa6.57□□□□□ -1.36
PDGFRB-203ENST00000517660 A0A087WZ39 114 aa6.56□□□□□ -1.36
PDGFRB-203ENST00000517660 A0A0J9YXV3 536 aa6.56□□□□□ -1.36
PDGFRB-203ENST00000517660 K7EMI3 77 aa6.56□□□□□ -1.36
PDGFRB-203ENST00000517660 HSBP1O75506 76 aa6.56□□□□□ -1.36
PDGFRB-203ENST00000517660 RPL18AQ02543 176 aaKnown RBP6.56□□□□□ -1.36
PDGFRB-203ENST00000517660 ORMDL2Q53FV1 153 aa6.56□□□□□ -1.36
PDGFRB-203ENST00000517660 C9orf116Q5BN46 136 aaPredicted RBP6.56□□□□□ -1.36
PDGFRB-203ENST00000517660 SPINK6Q6UWN8 80 aa6.56□□□□□ -1.36
PDGFRB-203ENST00000517660 C2orf66Q6UXQ4 117 aa6.56□□□□□ -1.36
PDGFRB-203ENST00000517660 TEX43Q6ZNM6 134 aa6.56□□□□□ -1.36
PDGFRB-203ENST00000517660 SRSF9Q13242 221 aaKnown RBP eCLIP6.55□□□□□ -1.36
PDGFRB-203ENST00000517660 UNQ6190/PRO20217Q6UXQ8 127 aa6.55□□□□□ -1.36
PDGFRB-203ENST00000517660 Q6ZN92 141 aa6.55□□□□□ -1.36
PDGFRB-203ENST00000517660 LINC01561Q8N1V8 128 aa6.55□□□□□ -1.36
PDGFRB-203ENST00000517660 LINC01600Q96MT4 127 aa6.55□□□□□ -1.36
PDGFRB-203ENST00000517660 C2orf88Q9BSF0 95 aa6.55□□□□□ -1.36
PDGFRB-203ENST00000517660 VCX2Q9H322 139 aa6.55□□□□□ -1.36
PDGFRB-203ENST00000517660 NXT2Q9NPJ8 142 aaKnown RBP6.55□□□□□ -1.36
PDGFRB-203ENST00000517660 TSTD3H0UI37 97 aa6.54□□□□□ -1.36
PDGFRB-203ENST00000517660 NPSP0C0P6 89 aa6.54□□□□□ -1.36
PDGFRB-203ENST00000517660 TLX1NBP0CAT3 122 aa6.54□□□□□ -1.36
PDGFRB-203ENST00000517660 G0S2P27469 103 aa6.54□□□□□ -1.36
PDGFRB-203ENST00000517660 UBE2D1P51668 147 aa6.54□□□□□ -1.36
PDGFRB-203ENST00000517660 KRTDAPP60985 99 aa6.54□□□□□ -1.36
PDGFRB-203ENST00000517660 KIAA0087Q14695 138 aa6.54□□□□□ -1.36
PDGFRB-203ENST00000517660 C10orf25Q5T742 122 aa6.54□□□□□ -1.36
PDGFRB-203ENST00000517660 CHCHD1Q96BP2 118 aaKnown RBP6.54□□□□□ -1.36
PDGFRB-203ENST00000517660 AMELXQ99217 191 aa6.54□□□□□ -1.36
PDGFRB-203ENST00000517660 IGIPA6NJ69 53 aa6.53□□□□□ -1.36
PDGFRB-203ENST00000517660 LCE2AQ5TA79 106 aaPredicted RBP6.53□□□□□ -1.36
PDGFRB-203ENST00000517660 REG3GQ6UW15 175 aa6.53□□□□□ -1.36
PDGFRB-203ENST00000517660 FA2HQ7L5A8 372 aa6.53□□□□□ -1.36
PDGFRB-203ENST00000517660 FAM19A2Q8N3H0 131 aa6.53□□□□□ -1.36
PDGFRB-203ENST00000517660 C6orf48Q9UBA6 75 aa6.53□□□□□ -1.36
PDGFRB-203ENST00000517660 PAPPA-AS1Q5QFB9 102 aa6.52□□□□□ -1.37
PDGFRB-203ENST00000517660 ZC2HC1BQ5TFG8 222 aa6.52□□□□□ -1.37
PDGFRB-203ENST00000517660 LINC00173Q6ZV60 143 aa6.52□□□□□ -1.37
PDGFRB-203ENST00000517660 PHF5AQ7RTV0 110 aaKnown RBP6.52□□□□□ -1.37
PDGFRB-203ENST00000517660 TRBV30A0A0K0K1B3 111 aa6.51□□□□□ -1.37
PDGFRB-203ENST00000517660 LINC00614P0C842 121 aa6.51□□□□□ -1.37
PDGFRB-203ENST00000517660 FAM19A3Q7Z5A8 133 aa6.51□□□□□ -1.37
PDGFRB-203ENST00000517660 PRO1933Q9H354 126 aa6.51□□□□□ -1.37
PDGFRB-203ENST00000517660 PSORS1C2Q9UIG4 136 aa6.51□□□□□ -1.37
PDGFRB-203ENST00000517660 LINC00587B1AMM8 73 aa6.5□□□□□ -1.37
PDGFRB-203ENST00000517660 PRSS2P07478 247 aa6.5□□□□□ -1.37
PDGFRB-203ENST00000517660 SEC11AP67812 179 aa6.5□□□□□ -1.37
PDGFRB-203ENST00000517660 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
PDGFRB-203ENST00000517660 C2orf82Q6UX34 121 aa6.5□□□□□ -1.37
PDGFRB-203ENST00000517660 TOMM6Q96B49 74 aa6.5□□□□□ -1.37
PDGFRB-203ENST00000517660 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
PDGFRB-203ENST00000517660 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
PDGFRB-203ENST00000517660 FAM168BA1KXE4 195 aa6.49□□□□□ -1.37
PDGFRB-203ENST00000517660 C20orf202A1L168 122 aa6.49□□□□□ -1.37
PDGFRB-203ENST00000517660 C3orf79P0CE67 100 aa6.49□□□□□ -1.37
PDGFRB-203ENST00000517660 KRTAP10-8P60410 259 aa6.49□□□□□ -1.37
PDGFRB-203ENST00000517660 HERVK_113P63121 156 aa6.49□□□□□ -1.37
PDGFRB-203ENST00000517660 PMCHL1Q16048 86 aa6.49□□□□□ -1.37
PDGFRB-203ENST00000517660 C6orf226Q5I0X4 101 aa6.49□□□□□ -1.37
PDGFRB-203ENST00000517660 C1orf137Q5JT78 98 aa6.49□□□□□ -1.37
PDGFRB-203ENST00000517660 URB1-AS1Q96HZ7 61 aa6.49□□□□□ -1.37
PDGFRB-203ENST00000517660 VAMP8Q9BV40 100 aa6.49□□□□□ -1.37
PDGFRB-203ENST00000517660 HSPB8Q9UJY1 196 aa6.49□□□□□ -1.37
PDGFRB-203ENST00000517660 NDUFC2-KCTD14E9PQ53 114 aa6.48□□□□□ -1.37
PDGFRB-203ENST00000517660 LEPROTL1O95214 131 aa6.48□□□□□ -1.37
PDGFRB-203ENST00000517660 CKS1BP61024 79 aa6.48□□□□□ -1.37
PDGFRB-203ENST00000517660 ERASQ7Z444 233 aa6.48□□□□□ -1.37
PDGFRB-203ENST00000517660 SCGB3A1Q96QR1 104 aa6.48□□□□□ -1.37
PDGFRB-203ENST00000517660 GEMIN7Q9H840 131 aaKnown RBP6.48□□□□□ -1.37
PDGFRB-203ENST00000517660 TOMM7Q9P0U1 55 aa6.48□□□□□ -1.37
PDGFRB-203ENST00000517660 LINC01546A6NGU7 62 aa6.47□□□□□ -1.37
PDGFRB-203ENST00000517660 LINC01549A6NIU2 74 aa6.47□□□□□ -1.37
PDGFRB-203ENST00000517660 DDTP30046 118 aa6.47□□□□□ -1.37
PDGFRB-203ENST00000517660 FAM19A5Q7Z5A7 132 aaPredicted RBP6.47□□□□□ -1.37
PDGFRB-203ENST00000517660 Q8IZM0 81 aa6.47□□□□□ -1.37
PDGFRB-203ENST00000517660 MAP1LC3CQ9BXW4 147 aa6.47□□□□□ -1.37
PDGFRB-203ENST00000517660 CDKN2A-AS1Q9UH64 79 aa6.47□□□□□ -1.37
PDGFRB-203ENST00000517660 IGLV7-43P04211 117 aa6.46□□□□□ -1.38
PDGFRB-203ENST00000517660 KRTAP7-1Q8IUC3 87 aa6.46□□□□□ -1.38
PDGFRB-203ENST00000517660 PAM16Q9Y3D7 125 aa6.46□□□□□ -1.38
PDGFRB-203ENST00000517660 HBDP02042 147 aa6.45□□□□□ -1.38
PDGFRB-203ENST00000517660 C9orf129Q5T035 196 aaKnown RBP6.45□□□□□ -1.38
PDGFRB-203ENST00000517660 KRTAP11-1Q8IUC1 163 aa6.45□□□□□ -1.38
PDGFRB-203ENST00000517660 TINCRA0A1B0GVN0 87 aa6.44□□□□□ -1.38
PDGFRB-203ENST00000517660 SYS1-DBNDD2H3BUS1 97 aa6.44□□□□□ -1.38
PDGFRB-203ENST00000517660 M0QXV9 152 aa6.44□□□□□ -1.38
PDGFRB-203ENST00000517660 UBE2BP63146 152 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms