RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 MRPL55Q7Z7F7 128 aaKnown RBP4.61□□□□□ -1.67
TNFRSF11B-202ENST00000517352 EIF5A2Q9GZV4 153 aaKnown RBP4.61□□□□□ -1.67
TNFRSF11B-202ENST00000517352 A0A1B0GUT8 65 aa4.6□□□□□ -1.67
TNFRSF11B-202ENST00000517352 C20orf202A1L168 122 aa4.6□□□□□ -1.67
TNFRSF11B-202ENST00000517352 FOXA3P55318 350 aaPredicted RBP4.6□□□□□ -1.67
TNFRSF11B-202ENST00000517352 RAB5BP61020 215 aa4.6□□□□□ -1.67
TNFRSF11B-202ENST00000517352 CNFNQ9BYD5 112 aa4.6□□□□□ -1.67
TNFRSF11B-202ENST00000517352 TMEM126AQ9H061 195 aa4.6□□□□□ -1.67
TNFRSF11B-202ENST00000517352 CDC42SE2Q9NRR3 84 aa4.6□□□□□ -1.67
TNFRSF11B-202ENST00000517352 TRBV6-5A0A0K0K1A5 114 aa4.59□□□□□ -1.67
TNFRSF11B-202ENST00000517352 UBE2D1P51668 147 aa4.59□□□□□ -1.67
TNFRSF11B-202ENST00000517352 LRP2P98164 4655 aa4.59□□□□□ -1.67
TNFRSF11B-202ENST00000517352 C5orf38Q86SI9 138 aa4.59□□□□□ -1.67
TNFRSF11B-202ENST00000517352 CBLN2Q8IUK8 224 aa4.59□□□□□ -1.67
TNFRSF11B-202ENST00000517352 IMMP2LQ96T52 175 aa4.59□□□□□ -1.67
TNFRSF11B-202ENST00000517352 HSPB8Q9UJY1 196 aa4.59□□□□□ -1.67
TNFRSF11B-202ENST00000517352 HIGD1CA8MV81 97 aa4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 TMEM250H0YL14 139 aa4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 TSHBP01222 138 aa4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 DDTP30046 118 aa4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 UBE2BP63146 152 aa4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 SRSF3P84103 164 aaKnown RBP4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 SPAG11BQ08648 103 aa4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 C9orf116Q5BN46 136 aaPredicted RBP4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 Q6ZVH6 145 aa4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 DIRC1Q969H9 104 aa4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 SMIM7Q9BQ49 75 aa4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 TMEM191AQ9H0A3 160 aa4.58□□□□□ -1.68
TNFRSF11B-202ENST00000517352 A0A0U1RQV1 116 aa4.57□□□□□ -1.68
TNFRSF11B-202ENST00000517352 ZNF727A8MUV8 499 aa4.57□□□□□ -1.68
TNFRSF11B-202ENST00000517352 GAS8-AS1O95177 125 aa4.57□□□□□ -1.68
TNFRSF11B-202ENST00000517352 RNASE13Q5GAN3 156 aaKnown RBP4.57□□□□□ -1.68
TNFRSF11B-202ENST00000517352 AMN1Q8IY45 258 aa4.57□□□□□ -1.68
TNFRSF11B-202ENST00000517352 ORAOV1Q8WV07 137 aa4.57□□□□□ -1.68
TNFRSF11B-202ENST00000517352 C2orf48Q96LS8 159 aa4.57□□□□□ -1.68
TNFRSF11B-202ENST00000517352 OPRPNQ99935 248 aaPredicted RBP4.57□□□□□ -1.68
TNFRSF11B-202ENST00000517352 PSORS1C2Q9UIG4 136 aa4.57□□□□□ -1.68
TNFRSF11B-202ENST00000517352 TRBV27A0A0K0K1C4 114 aa4.56□□□□□ -1.68
TNFRSF11B-202ENST00000517352 A6NDN8 102 aa4.56□□□□□ -1.68
TNFRSF11B-202ENST00000517352 NDUFA1O15239 70 aa4.56□□□□□ -1.68
TNFRSF11B-202ENST00000517352 CKS2P33552 79 aa4.56□□□□□ -1.68
TNFRSF11B-202ENST00000517352 KRTAP10-8P60410 259 aa4.56□□□□□ -1.68
TNFRSF11B-202ENST00000517352 TMEM241Q24JQ0 296 aa4.56□□□□□ -1.68
TNFRSF11B-202ENST00000517352 PHF5AQ7RTV0 110 aaKnown RBP4.56□□□□□ -1.68
TNFRSF11B-202ENST00000517352 NUP35Q8NFH5 326 aa4.56□□□□□ -1.68
TNFRSF11B-202ENST00000517352 TNXBP22105 4242 aa4.56□□□□□ -1.68
TNFRSF11B-202ENST00000517352 A0A1W2PNN7 141 aa4.55□□□□□ -1.68
TNFRSF11B-202ENST00000517352 C9orf118A6NHY6 69 aa4.55□□□□□ -1.68
TNFRSF11B-202ENST00000517352 IFITM10A6NMD0 228 aa4.55□□□□□ -1.68
TNFRSF11B-202ENST00000517352 SRSF9Q13242 221 aaKnown RBP eCLIP4.55□□□□□ -1.68
TNFRSF11B-202ENST00000517352 PRR4Q16378 134 aa4.55□□□□□ -1.68
TNFRSF11B-202ENST00000517352 OCIAD2Q56VL3 154 aa4.55□□□□□ -1.68
TNFRSF11B-202ENST00000517352 ALKAL2Q6UX46 152 aa4.55□□□□□ -1.68
TNFRSF11B-202ENST00000517352 OR10D4PQ8NGN7 298 aa4.55□□□□□ -1.68
TNFRSF11B-202ENST00000517352 NAT8BQ9UHF3 227 aa4.55□□□□□ -1.68
TNFRSF11B-202ENST00000517352 J3KT08 172 aa4.54□□□□□ -1.68
TNFRSF11B-202ENST00000517352 M0R143 59 aa4.54□□□□□ -1.68
TNFRSF11B-202ENST00000517352 PRSS2P07478 247 aa4.54□□□□□ -1.68
TNFRSF11B-202ENST00000517352 POLR2KP53803 58 aaKnown RBP4.54□□□□□ -1.68
TNFRSF11B-202ENST00000517352 HBBP68871 147 aa4.54□□□□□ -1.68
TNFRSF11B-202ENST00000517352 BATFQ16520 125 aa4.54□□□□□ -1.68
TNFRSF11B-202ENST00000517352 Q6ZN92 141 aa4.54□□□□□ -1.68
TNFRSF11B-202ENST00000517352 UBE2D4Q9Y2X8 147 aa4.54□□□□□ -1.68
TNFRSF11B-202ENST00000517352 LINC00862A6NCI5 91 aa4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 IGLV7-43P04211 117 aa4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 IFI27P40305 119 aaPredicted RBP4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 ADIRFQ15847 76 aa4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 Q6ZUT4 128 aa4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 LINC01551Q86U37 167 aa4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 TCTE3Q8IZS6 198 aa4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 C20orf78Q9BR46 151 aa4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 OSTCQ9NRP0 149 aa4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 MRPL35Q9NZE8 188 aaKnown RBP4.53□□□□□ -1.68
TNFRSF11B-202ENST00000517352 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
TNFRSF11B-202ENST00000517352 TIMM21Q9BVV7 248 aa4.52□□□□□ -1.69
TNFRSF11B-202ENST00000517352 IGLV1-50A0A075B6I6 118 aa4.51□□□□□ -1.69
TNFRSF11B-202ENST00000517352 A0A1B0GX51 115 aa4.51□□□□□ -1.69
TNFRSF11B-202ENST00000517352 H0Y9J4 135 aa4.51□□□□□ -1.69
TNFRSF11B-202ENST00000517352 NDUFC2O95298 119 aa4.51□□□□□ -1.69
TNFRSF11B-202ENST00000517352 PFN2P35080 140 aa4.51□□□□□ -1.69
TNFRSF11B-202ENST00000517352 MRPL51Q4U2R6 128 aaKnown RBP4.51□□□□□ -1.69
TNFRSF11B-202ENST00000517352 FAM104BQ5XKR9 115 aa4.51□□□□□ -1.69
TNFRSF11B-202ENST00000517352 TOMM7Q9P0U1 55 aa4.51□□□□□ -1.69
TNFRSF11B-202ENST00000517352 ERG28Q9UKR5 140 aa4.51□□□□□ -1.69
TNFRSF11B-202ENST00000517352 FAM236DA0A1B0GTK5 79 aa4.5□□□□□ -1.69
TNFRSF11B-202ENST00000517352 FAM168BA1KXE4 195 aa4.5□□□□□ -1.69
TNFRSF11B-202ENST00000517352 FAM236CP0DP71 79 aa4.5□□□□□ -1.69
TNFRSF11B-202ENST00000517352 RPL39P62891 51 aaKnown RBP4.5□□□□□ -1.69
TNFRSF11B-202ENST00000517352 MRPL54Q6P161 138 aaKnown RBP4.5□□□□□ -1.69
TNFRSF11B-202ENST00000517352 UNQ6190/PRO20217Q6UXQ8 127 aa4.5□□□□□ -1.69
TNFRSF11B-202ENST00000517352 TEX43Q6ZNM6 134 aa4.5□□□□□ -1.69
TNFRSF11B-202ENST00000517352 D6R8Y8 96 aa4.49□□□□□ -1.69
TNFRSF11B-202ENST00000517352 PEA15Q15121 130 aa4.49□□□□□ -1.69
TNFRSF11B-202ENST00000517352 ORMDL3Q8N138 153 aa4.49□□□□□ -1.69
TNFRSF11B-202ENST00000517352 NRACQ8N912 160 aa4.49□□□□□ -1.69
TNFRSF11B-202ENST00000517352 SMIM2Q9BVW6 85 aa4.49□□□□□ -1.69
TNFRSF11B-202ENST00000517352 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms