RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 A0A1W2PNN7 141 aa4.45□□□□□ -1.7
SCARNA18.2-201ENST00000516882 NDUFC2-KCTD14E9PQ53 114 aa4.45□□□□□ -1.7
SCARNA18.2-201ENST00000516882 H3BRM9 83 aa4.45□□□□□ -1.7
SCARNA18.2-201ENST00000516882 HBDP02042 147 aa4.45□□□□□ -1.7
SCARNA18.2-201ENST00000516882 HNRNPA3P51991 378 aaKnown RBP4.45□□□□□ -1.7
SCARNA18.2-201ENST00000516882 SERTAD4-AS1Q5TG53 156 aa4.45□□□□□ -1.7
SCARNA18.2-201ENST00000516882 REG3GQ6UW15 175 aa4.45□□□□□ -1.7
SCARNA18.2-201ENST00000516882 C18orf32Q8TCD1 76 aa4.45□□□□□ -1.7
SCARNA18.2-201ENST00000516882 CST9LQ9H4G1 147 aa4.45□□□□□ -1.7
SCARNA18.2-201ENST00000516882 MYCBP2O75592 4640 aa4.45□□□□□ -1.7
SCARNA18.2-201ENST00000516882 F8VRH5 84 aa4.44□□□□□ -1.7
SCARNA18.2-201ENST00000516882 ATP5LO75964 103 aa4.44□□□□□ -1.7
SCARNA18.2-201ENST00000516882 PDZD11Q5EBL8 140 aa4.44□□□□□ -1.7
SCARNA18.2-201ENST00000516882 SPINK6Q6UWN8 80 aa4.44□□□□□ -1.7
SCARNA18.2-201ENST00000516882 FAM19A5Q7Z5A7 132 aaPredicted RBP4.44□□□□□ -1.7
SCARNA18.2-201ENST00000516882 UBE2BP63146 152 aa4.43□□□□□ -1.7
SCARNA18.2-201ENST00000516882 C1orf137Q5JT78 98 aa4.43□□□□□ -1.7
SCARNA18.2-201ENST00000516882 PHF5AQ7RTV0 110 aaKnown RBP4.43□□□□□ -1.7
SCARNA18.2-201ENST00000516882 COX7B2Q8TF08 81 aa4.43□□□□□ -1.7
SCARNA18.2-201ENST00000516882 IGLV5-45A0A087WSX0 123 aa4.42□□□□□ -1.7
SCARNA18.2-201ENST00000516882 FAM168BA1KXE4 195 aa4.42□□□□□ -1.7
SCARNA18.2-201ENST00000516882 SMIM1B2RUZ4 78 aa4.42□□□□□ -1.7
SCARNA18.2-201ENST00000516882 M0QXV9 152 aa4.42□□□□□ -1.7
SCARNA18.2-201ENST00000516882 SPINK8P0C7L1 97 aa4.42□□□□□ -1.7
SCARNA18.2-201ENST00000516882 PMCHL1Q16048 86 aa4.42□□□□□ -1.7
SCARNA18.2-201ENST00000516882 CHCHD1Q96BP2 118 aaKnown RBP4.42□□□□□ -1.7
SCARNA18.2-201ENST00000516882 PSORS1C2Q9UIG4 136 aa4.42□□□□□ -1.7
SCARNA18.2-201ENST00000516882 IGLC3P0DOY3 106 aa4.41□□□□□ -1.7
SCARNA18.2-201ENST00000516882 BAGE3Q86Y29 109 aa4.41□□□□□ -1.7
SCARNA18.2-201ENST00000516882 A0A096LNJ9 63 aa4.4□□□□□ -1.71
SCARNA18.2-201ENST00000516882 HSBP1O75506 76 aa4.4□□□□□ -1.71
SCARNA18.2-201ENST00000516882 LBHQ53QV2 105 aaPredicted RBP4.4□□□□□ -1.71
SCARNA18.2-201ENST00000516882 C9orf129Q5T035 196 aaKnown RBP4.4□□□□□ -1.71
SCARNA18.2-201ENST00000516882 TMEM170BQ5T4T1 132 aa4.4□□□□□ -1.71
SCARNA18.2-201ENST00000516882 SFTA2Q6UW10 78 aa4.4□□□□□ -1.71
SCARNA18.2-201ENST00000516882 CBLN2Q8IUK8 224 aa4.4□□□□□ -1.71
SCARNA18.2-201ENST00000516882 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
SCARNA18.2-201ENST00000516882 LINC01600Q96MT4 127 aa4.4□□□□□ -1.71
SCARNA18.2-201ENST00000516882 XAGE1AQ9HD64 81 aa4.4□□□□□ -1.71
SCARNA18.2-201ENST00000516882 IGLV7-43P04211 117 aa4.39□□□□□ -1.71
SCARNA18.2-201ENST00000516882 SRSF9Q13242 221 aaKnown RBP eCLIP4.39□□□□□ -1.71
SCARNA18.2-201ENST00000516882 DIRC1Q969H9 104 aa4.39□□□□□ -1.71
SCARNA18.2-201ENST00000516882 IFI27L1Q96BM0 104 aa4.39□□□□□ -1.71
SCARNA18.2-201ENST00000516882 YPEL4Q96NS1 127 aa4.39□□□□□ -1.71
SCARNA18.2-201ENST00000516882 CHTOPQ9Y3Y2 248 aaKnown RBP4.39□□□□□ -1.71
SCARNA18.2-201ENST00000516882 TRGC2P03986 189 aa4.38□□□□□ -1.71
SCARNA18.2-201ENST00000516882 ZNF22P17026 224 aaPredicted RBP4.38□□□□□ -1.71
SCARNA18.2-201ENST00000516882 MRPL55Q7Z7F7 128 aaKnown RBP4.38□□□□□ -1.71
SCARNA18.2-201ENST00000516882 SLC7A5P1Q8MH63 180 aa4.38□□□□□ -1.71
SCARNA18.2-201ENST00000516882 NKAPP1Q8N9T2 125 aa4.38□□□□□ -1.71
SCARNA18.2-201ENST00000516882 TP73-AS1Q9UF72 201 aa4.38□□□□□ -1.71
SCARNA18.2-201ENST00000516882 PLA2G2DQ9UNK4 145 aa4.38□□□□□ -1.71
SCARNA18.2-201ENST00000516882 C22orf24Q9Y442 160 aa4.38□□□□□ -1.71
SCARNA18.2-201ENST00000516882 PKHD1L1Q86WI1 4243 aa4.38□□□□□ -1.71
SCARNA18.2-201ENST00000516882 LRP1Q07954 4544 aaKnown RBP4.38□□□□□ -1.71
SCARNA18.2-201ENST00000516882 HERC1Q15751 4861 aa4.38□□□□□ -1.71
SCARNA18.2-201ENST00000516882 TRAV12-1A0A0B4J245 112 aa4.37□□□□□ -1.71
SCARNA18.2-201ENST00000516882 IGLV5-39A0A0G2JS06 123 aa4.37□□□□□ -1.71
SCARNA18.2-201ENST00000516882 C11orf86A6NJI1 115 aa4.37□□□□□ -1.71
SCARNA18.2-201ENST00000516882 NUPR1O60356 82 aa4.37□□□□□ -1.71
SCARNA18.2-201ENST00000516882 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
SCARNA18.2-201ENST00000516882 PFN2P35080 140 aa4.37□□□□□ -1.71
SCARNA18.2-201ENST00000516882 COX17Q14061 63 aa4.37□□□□□ -1.71
SCARNA18.2-201ENST00000516882 H0Y8G0 127 aa4.36□□□□□ -1.71
SCARNA18.2-201ENST00000516882 ATP6V1G1O75348 118 aa4.36□□□□□ -1.71
SCARNA18.2-201ENST00000516882 LEPROTL1O95214 131 aa4.36□□□□□ -1.71
SCARNA18.2-201ENST00000516882 ODF1Q14990 250 aa4.36□□□□□ -1.71
SCARNA18.2-201ENST00000516882 KRTAP7-1Q8IUC3 87 aa4.36□□□□□ -1.71
SCARNA18.2-201ENST00000516882 FAM19A2Q8N3H0 131 aa4.36□□□□□ -1.71
SCARNA18.2-201ENST00000516882 HSPB8Q9UJY1 196 aa4.36□□□□□ -1.71
SCARNA18.2-201ENST00000516882 ERG28Q9UKR5 140 aa4.36□□□□□ -1.71
SCARNA18.2-201ENST00000516882 H0Y9J4 135 aa4.35□□□□□ -1.71
SCARNA18.2-201ENST00000516882 RPL24P83731 157 aaKnown RBP4.35□□□□□ -1.71
SCARNA18.2-201ENST00000516882 ZNF625Q96I27 306 aaPredicted RBP4.35□□□□□ -1.71
SCARNA18.2-201ENST00000516882 FAT3Q8TDW7 4589 aa4.34□□□□□ -1.71
SCARNA18.2-201ENST00000516882 TMEM223A0PJW6 202 aa4.34□□□□□ -1.71
SCARNA18.2-201ENST00000516882 RPL37AP8A6NKH3 93 aa4.34□□□□□ -1.71
SCARNA18.2-201ENST00000516882 LINC00587B1AMM8 73 aa4.34□□□□□ -1.71
SCARNA18.2-201ENST00000516882 ZNF861PO60384 105 aa4.34□□□□□ -1.71
SCARNA18.2-201ENST00000516882 SERF1AO75920 110 aa4.34□□□□□ -1.71
SCARNA18.2-201ENST00000516882 RPL28P46779 137 aaKnown RBP4.34□□□□□ -1.71
SCARNA18.2-201ENST00000516882 LINC00158P58513 81 aa4.34□□□□□ -1.71
SCARNA18.2-201ENST00000516882 KRTAP11-1Q8IUC1 163 aa4.34□□□□□ -1.71
SCARNA18.2-201ENST00000516882 LINC00167Q96N53 147 aa4.34□□□□□ -1.71
SCARNA18.2-201ENST00000516882 IGLV5-37A0A075B6J1 123 aa4.33□□□□□ -1.72
SCARNA18.2-201ENST00000516882 GAGE10A6NGK3 116 aa4.33□□□□□ -1.72
SCARNA18.2-201ENST00000516882 COLCA2A8K830 154 aa4.33□□□□□ -1.72
SCARNA18.2-201ENST00000516882 PLNP26678 52 aa4.33□□□□□ -1.72
SCARNA18.2-201ENST00000516882 KRTAP10-8P60410 259 aa4.33□□□□□ -1.72
SCARNA18.2-201ENST00000516882 HERVK_113P61574 105 aa4.33□□□□□ -1.72
SCARNA18.2-201ENST00000516882 HERV-K104P63124 156 aa4.33□□□□□ -1.72
SCARNA18.2-201ENST00000516882 MEIG1Q5JSS6 88 aa4.33□□□□□ -1.72
SCARNA18.2-201ENST00000516882 SND1-IT1Q9HBX3 110 aa4.33□□□□□ -1.72
SCARNA18.2-201ENST00000516882 IGLV1-50A0A075B6I6 118 aa4.32□□□□□ -1.72
SCARNA18.2-201ENST00000516882 MYMXA0A1B0GTQ4 84 aa4.32□□□□□ -1.72
SCARNA18.2-201ENST00000516882 BCE1O60756 84 aa4.32□□□□□ -1.72
SCARNA18.2-201ENST00000516882 FABP4P15090 132 aa4.32□□□□□ -1.72
SCARNA18.2-201ENST00000516882 RPL13AP40429 203 aaKnown RBP4.32□□□□□ -1.72
SCARNA18.2-201ENST00000516882 UBE2AP49459 152 aa4.32□□□□□ -1.72
SCARNA18.2-201ENST00000516882 MAP1LC3CQ9BXW4 147 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms