RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 S100A6P06703 90 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 CXCL5P42830 114 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 NDUFA6P56556 154 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 SPAG11BQ08648 103 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 SYCNQ0VAF6 134 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 HIGD2BQ4VC39 106 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 SFTA2Q6UW10 78 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 Q6ZSA8 131 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 Q8IZM0 81 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 LINC00469Q8N7U9 141 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 ORAOV1Q8WV07 137 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 MAP1LC3CQ9BXW4 147 aa4.59□□□□□ -1.67
SMAD1-213ENST00000514778 MRPL35Q9NZE8 188 aaKnown RBP4.59□□□□□ -1.67
SMAD1-213ENST00000514778 CHTOPQ9Y3Y2 248 aaKnown RBP4.59□□□□□ -1.67
SMAD1-213ENST00000514778 SMIM1B2RUZ4 78 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 NDUFA1O15239 70 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 PRSS2P07478 247 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 PLNP26678 52 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 AKR1D1P51857 326 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 KRTAP10-1P60331 282 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 KIAA0087Q14695 138 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 C6orf226Q5I0X4 101 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 SDIM1Q6ZPB5 146 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 CARD19Q96LW7 228 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 CAMK2N2Q96S95 79 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 CHAC1Q9BUX1 264 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 LINC00474Q9P2X8 69 aa4.58□□□□□ -1.68
SMAD1-213ENST00000514778 TMA7Q9Y2S6 64 aaKnown RBP4.58□□□□□ -1.68
SMAD1-213ENST00000514778 IGLV5-39A0A0G2JS06 123 aa4.57□□□□□ -1.68
SMAD1-213ENST00000514778 TRBV30A0A0K0K1B3 111 aa4.57□□□□□ -1.68
SMAD1-213ENST00000514778 FABP4P15090 132 aa4.57□□□□□ -1.68
SMAD1-213ENST00000514778 CKS1BP61024 79 aa4.57□□□□□ -1.68
SMAD1-213ENST00000514778 CIRBPQ14011 172 aaKnown RBP4.57□□□□□ -1.68
SMAD1-213ENST00000514778 ODF1Q14990 250 aa4.57□□□□□ -1.68
SMAD1-213ENST00000514778 LOC107984640A0A0U1RRK4 108 aa4.56□□□□□ -1.68
SMAD1-213ENST00000514778 C11orf86A6NJI1 115 aa4.56□□□□□ -1.68
SMAD1-213ENST00000514778 SYS1-DBNDD2H3BUS1 97 aa4.56□□□□□ -1.68
SMAD1-213ENST00000514778 TLX1NBP0CAT3 122 aa4.56□□□□□ -1.68
SMAD1-213ENST00000514778 ZNF22P17026 224 aaPredicted RBP4.56□□□□□ -1.68
SMAD1-213ENST00000514778 CTAG1AP78358 180 aa4.56□□□□□ -1.68
SMAD1-213ENST00000514778 PET117Q6UWS5 81 aa4.56□□□□□ -1.68
SMAD1-213ENST00000514778 COX7B2Q8TF08 81 aa4.56□□□□□ -1.68
SMAD1-213ENST00000514778 TMEM223A0PJW6 202 aa4.55□□□□□ -1.68
SMAD1-213ENST00000514778 DPM2O94777 84 aa4.55□□□□□ -1.68
SMAD1-213ENST00000514778 S100A2P29034 98 aa4.55□□□□□ -1.68
SMAD1-213ENST00000514778 TMEM170BQ5T4T1 132 aa4.55□□□□□ -1.68
SMAD1-213ENST00000514778 Q6ZRU5 148 aa4.55□□□□□ -1.68
SMAD1-213ENST00000514778 SVIPQ8NHG7 77 aa4.55□□□□□ -1.68
SMAD1-213ENST00000514778 NDUFC2-KCTD14E9PQ53 114 aa4.54□□□□□ -1.68
SMAD1-213ENST00000514778 IGKCP01834 107 aa4.54□□□□□ -1.68
SMAD1-213ENST00000514778 SPINK8P0C7L1 97 aa4.54□□□□□ -1.68
SMAD1-213ENST00000514778 FUSP35637 526 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMAD1-213ENST00000514778 LINC01545Q5VT33 79 aa4.54□□□□□ -1.68
SMAD1-213ENST00000514778 HIST3H2BBQ8N257 126 aa4.54□□□□□ -1.68
SMAD1-213ENST00000514778 LINC00526Q96FQ7 95 aa4.54□□□□□ -1.68
SMAD1-213ENST00000514778 TOMM7Q9P0U1 55 aa4.54□□□□□ -1.68
SMAD1-213ENST00000514778 C20orf202A1L168 122 aa4.53□□□□□ -1.68
SMAD1-213ENST00000514778 C5orf52A6NGY3 159 aa4.53□□□□□ -1.68
SMAD1-213ENST00000514778 C3orf79P0CE67 100 aa4.53□□□□□ -1.68
SMAD1-213ENST00000514778 XGP55808 180 aa4.53□□□□□ -1.68
SMAD1-213ENST00000514778 SNRPEP62304 92 aaKnown RBP4.53□□□□□ -1.68
SMAD1-213ENST00000514778 COX17Q14061 63 aa4.53□□□□□ -1.68
SMAD1-213ENST00000514778 UNQ6190/PRO20217Q6UXQ8 127 aa4.53□□□□□ -1.68
SMAD1-213ENST00000514778 SPACA4Q8TDM5 124 aa4.53□□□□□ -1.68
SMAD1-213ENST00000514778 C6orf48Q9UBA6 75 aa4.53□□□□□ -1.68
SMAD1-213ENST00000514778 DNAH11Q96DT5 4516 aa4.53□□□□□ -1.69
SMAD1-213ENST00000514778 LINC00587B1AMM8 73 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 EPM2AB3EWF7 344 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 H0Y8G0 127 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 PTTG1IPP53801 180 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 HERVK_113P61574 105 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 HERV-K104P63124 156 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 LINC01620Q4KN68 170 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 C10orf25Q5T742 122 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 C2orf82Q6UX34 121 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 CIRBP-AS1Q8TBR5 109 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 PLEKHB2Q96CS7 222 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 HIST1H2BLQ99880 126 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 PLAC8Q9NZF1 115 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 FAM30AQ9NZY2 134 aa4.52□□□□□ -1.69
SMAD1-213ENST00000514778 A0A096LNI7 61 aa4.51□□□□□ -1.69
SMAD1-213ENST00000514778 E9PLD3 99 aa4.51□□□□□ -1.69
SMAD1-213ENST00000514778 LEPROTO15243 131 aa4.51□□□□□ -1.69
SMAD1-213ENST00000514778 NMUP48645 174 aa4.51□□□□□ -1.69
SMAD1-213ENST00000514778 KRTDAPP60985 99 aa4.51□□□□□ -1.69
SMAD1-213ENST00000514778 SCXQ7RTU7 201 aa4.51□□□□□ -1.69
SMAD1-213ENST00000514778 ZNF625Q96I27 306 aaPredicted RBP4.51□□□□□ -1.69
SMAD1-213ENST00000514778 CDIP1Q9H305 208 aa4.51□□□□□ -1.69
SMAD1-213ENST00000514778 PKHD1P08F94 4074 aa4.5□□□□□ -1.69
SMAD1-213ENST00000514778 EPPK1P58107 5090 aaKnown RBP4.5□□□□□ -1.69
SMAD1-213ENST00000514778 MYMXA0A1B0GTQ4 84 aa4.5□□□□□ -1.69
SMAD1-213ENST00000514778 Q6ZRP5 223 aa4.5□□□□□ -1.69
SMAD1-213ENST00000514778 Q8N1X5 172 aa4.5□□□□□ -1.69
SMAD1-213ENST00000514778 DPH3Q96FX2 82 aa4.5□□□□□ -1.69
SMAD1-213ENST00000514778 A0A087WYN8 130 aa4.49□□□□□ -1.69
SMAD1-213ENST00000514778 IGKV2-24A0A0C4DH68 120 aa4.49□□□□□ -1.69
SMAD1-213ENST00000514778 J3QQQ9 107 aa4.49□□□□□ -1.69
SMAD1-213ENST00000514778 RPL18AQ02543 176 aaKnown RBP4.49□□□□□ -1.69
SMAD1-213ENST00000514778 GAGE2BQ13066 116 aa4.49□□□□□ -1.69
SMAD1-213ENST00000514778 MAJINQ3KP22 176 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms