RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 TRBV6-5A0A0K0K1A5 114 aa3.69□□□□□ -1.82
CLDND1-229ENST00000513988 FAM74A7A6NL05 159 aa3.69□□□□□ -1.82
CLDND1-229ENST00000513988 IFITM10A6NMD0 228 aa3.69□□□□□ -1.82
CLDND1-229ENST00000513988 INMT-MINDY4F8WBC2 141 aa3.69□□□□□ -1.82
CLDND1-229ENST00000513988 SCGB1D1O95968 90 aa3.69□□□□□ -1.82
CLDND1-229ENST00000513988 FCER1GP30273 86 aa3.69□□□□□ -1.82
CLDND1-229ENST00000513988 TAGLN2P37802 199 aaKnown RBP3.69□□□□□ -1.82
CLDND1-229ENST00000513988 C6orf226Q5I0X4 101 aa3.69□□□□□ -1.82
CLDND1-229ENST00000513988 FXYD6-FXYD2A0A087WZ82 144 aa3.68□□□□□ -1.82
CLDND1-229ENST00000513988 TWIST1Q15672 202 aa3.68□□□□□ -1.82
CLDND1-229ENST00000513988 KIAA1644Q3SXP7 199 aa3.68□□□□□ -1.82
CLDND1-229ENST00000513988 PYDC2Q56P42 97 aa3.68□□□□□ -1.82
CLDND1-229ENST00000513988 C9orf153Q5TBE3 101 aa3.68□□□□□ -1.82
CLDND1-229ENST00000513988 AKAP14Q86UN6 197 aa3.68□□□□□ -1.82
CLDND1-229ENST00000513988 STOML3Q8TAV4 291 aa3.68□□□□□ -1.82
CLDND1-229ENST00000513988 TIMM21Q9BVV7 248 aa3.68□□□□□ -1.82
CLDND1-229ENST00000513988 NOL3O60936 208 aaKnown RBP3.67□□□□□ -1.82
CLDND1-229ENST00000513988 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
CLDND1-229ENST00000513988 Q6ZVH6 145 aa3.67□□□□□ -1.82
CLDND1-229ENST00000513988 BAGE2Q86Y30 109 aa3.67□□□□□ -1.82
CLDND1-229ENST00000513988 SMCR5Q8TEV8 140 aa3.67□□□□□ -1.82
CLDND1-229ENST00000513988 ACTR3CQ9C0K3 210 aaPredicted RBP3.67□□□□□ -1.82
CLDND1-229ENST00000513988 HSPB11Q9Y547 144 aa3.67□□□□□ -1.82
CLDND1-229ENST00000513988 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
CLDND1-229ENST00000513988 TRBV27A0A0K0K1C4 114 aa3.66□□□□□ -1.82
CLDND1-229ENST00000513988 F8VRH5 84 aa3.66□□□□□ -1.82
CLDND1-229ENST00000513988 HBBP68871 147 aa3.66□□□□□ -1.82
CLDND1-229ENST00000513988 SMIM15Q7Z3B0 74 aa3.66□□□□□ -1.82
CLDND1-229ENST00000513988 TMEM18Q96B42 140 aa3.66□□□□□ -1.82
CLDND1-229ENST00000513988 TCEAL7Q9BRU2 100 aa3.66□□□□□ -1.82
CLDND1-229ENST00000513988 Q9H521 79 aa3.66□□□□□ -1.82
CLDND1-229ENST00000513988 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
CLDND1-229ENST00000513988 XKRY2A2RUG3 117 aa3.65□□□□□ -1.83
CLDND1-229ENST00000513988 MBP02144 154 aa3.65□□□□□ -1.83
CLDND1-229ENST00000513988 S100A9P06702 114 aaKnown RBP3.65□□□□□ -1.83
CLDND1-229ENST00000513988 POLR2KP53803 58 aaKnown RBP3.65□□□□□ -1.83
CLDND1-229ENST00000513988 HRCT1Q6UXD1 115 aa3.65□□□□□ -1.83
CLDND1-229ENST00000513988 Q8IZM0 81 aa3.65□□□□□ -1.83
CLDND1-229ENST00000513988 ALKBH7Q9BT30 221 aaPredicted RBP3.65□□□□□ -1.83
CLDND1-229ENST00000513988 NAP1L6A6NFF2 107 aa3.64□□□□□ -1.83
CLDND1-229ENST00000513988 CST9LP1Q5W188 147 aa3.64□□□□□ -1.83
CLDND1-229ENST00000513988 LINC01561Q8N1V8 128 aa3.64□□□□□ -1.83
CLDND1-229ENST00000513988 CCDC160A6NGH7 325 aa3.63□□□□□ -1.83
CLDND1-229ENST00000513988 Q6ZN92 141 aa3.63□□□□□ -1.83
CLDND1-229ENST00000513988 SEC22CQ9BRL7 303 aa3.63□□□□□ -1.83
CLDND1-229ENST00000513988 MED9Q9NWA0 146 aa3.63□□□□□ -1.83
CLDND1-229ENST00000513988 VCYO14598 125 aa3.62□□□□□ -1.83
CLDND1-229ENST00000513988 ATP6V0CP27449 155 aa3.62□□□□□ -1.83
CLDND1-229ENST00000513988 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
CLDND1-229ENST00000513988 C9orf62Q8N4C0 152 aa3.62□□□□□ -1.83
CLDND1-229ENST00000513988 FAM104AQ969W3 186 aa3.62□□□□□ -1.83
CLDND1-229ENST00000513988 A0A087WXM4 84 aa3.61□□□□□ -1.83
CLDND1-229ENST00000513988 SIX6O95475 246 aa3.61□□□□□ -1.83
CLDND1-229ENST00000513988 VPREB1P12018 145 aa3.61□□□□□ -1.83
CLDND1-229ENST00000513988 RPL39P62891 51 aaKnown RBP3.61□□□□□ -1.83
CLDND1-229ENST00000513988 MRPS36P82909 103 aaKnown RBP3.61□□□□□ -1.83
CLDND1-229ENST00000513988 CNFNQ9BYD5 112 aa3.61□□□□□ -1.83
CLDND1-229ENST00000513988 SPANXA1Q9NS26 97 aa3.61□□□□□ -1.83
CLDND1-229ENST00000513988 IGKV2D-30A0A075B6S6 120 aa3.6□□□□□ -1.83
CLDND1-229ENST00000513988 A8MWP4 228 aa3.6□□□□□ -1.83
CLDND1-229ENST00000513988 RAB5BP61020 215 aa3.6□□□□□ -1.83
CLDND1-229ENST00000513988 SERF2P84101 59 aa3.6□□□□□ -1.83
CLDND1-229ENST00000513988 CNPY1Q3B7I2 92 aa3.6□□□□□ -1.83
CLDND1-229ENST00000513988 Q75L30 129 aa3.6□□□□□ -1.83
CLDND1-229ENST00000513988 PSMG3Q9BT73 122 aaPredicted RBP3.6□□□□□ -1.83
CLDND1-229ENST00000513988 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
CLDND1-229ENST00000513988 CTXND1A0A1B0GTU2 59 aa3.59□□□□□ -1.83
CLDND1-229ENST00000513988 BTCP35070 178 aa3.59□□□□□ -1.83
CLDND1-229ENST00000513988 CXCL5P42830 114 aa3.59□□□□□ -1.83
CLDND1-229ENST00000513988 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
CLDND1-229ENST00000513988 RPL24P83731 157 aaKnown RBP3.59□□□□□ -1.83
CLDND1-229ENST00000513988 ZNF726P1Q15940 193 aa3.59□□□□□ -1.83
CLDND1-229ENST00000513988 C10orf91Q5T1B1 145 aa3.59□□□□□ -1.83
CLDND1-229ENST00000513988 C1orf195Q5TG92 126 aa3.59□□□□□ -1.83
CLDND1-229ENST00000513988 TNFSF18Q9UNG2 199 aa3.59□□□□□ -1.83
CLDND1-229ENST00000513988 CENPXA8MT69 81 aa3.58□□□□□ -1.84
CLDND1-229ENST00000513988 RBM12B-AS1Q9P1G2 102 aa3.58□□□□□ -1.84
CLDND1-229ENST00000513988 V9GYH0 126 aa3.58□□□□□ -1.84
CLDND1-229ENST00000513988 ETDCA0A1B0GVM5 59 aa3.57□□□□□ -1.84
CLDND1-229ENST00000513988 NUDT15Q9NV35 164 aa3.57□□□□□ -1.84
CLDND1-229ENST00000513988 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
CLDND1-229ENST00000513988 PAGE4O60829 102 aa3.56□□□□□ -1.84
CLDND1-229ENST00000513988 RAB14P61106 215 aa3.56□□□□□ -1.84
CLDND1-229ENST00000513988 SUMO2P61956 95 aaKnown RBP3.56□□□□□ -1.84
CLDND1-229ENST00000513988 TRIQKQ629K1 86 aa3.56□□□□□ -1.84
CLDND1-229ENST00000513988 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
CLDND1-229ENST00000513988 TMUB2Q71RG4 321 aa3.56□□□□□ -1.84
CLDND1-229ENST00000513988 A0A0G2JQZ4 141 aa3.55□□□□□ -1.84
CLDND1-229ENST00000513988 ERC2-IT1O76042 136 aa3.55□□□□□ -1.84
CLDND1-229ENST00000513988 PET100P0DJ07 73 aa3.55□□□□□ -1.84
CLDND1-229ENST00000513988 RPL35P42766 123 aaKnown RBP3.55□□□□□ -1.84
CLDND1-229ENST00000513988 PPP1R1CQ8WVI7 109 aa3.55□□□□□ -1.84
CLDND1-229ENST00000513988 TRBV20OR9-2A0A075B6H5 130 aa3.54□□□□□ -1.84
CLDND1-229ENST00000513988 MAP1LC3B2A6NCE7 125 aa3.54□□□□□ -1.84
CLDND1-229ENST00000513988 A8MWL6 223 aa3.54□□□□□ -1.84
CLDND1-229ENST00000513988 H7C2G1 150 aa3.54□□□□□ -1.84
CLDND1-229ENST00000513988 PRYO14603 147 aa3.54□□□□□ -1.84
CLDND1-229ENST00000513988 PFDN1O60925 122 aa3.54□□□□□ -1.84
CLDND1-229ENST00000513988 MAP1LC3BQ9GZQ8 125 aa3.54□□□□□ -1.84
CLDND1-229ENST00000513988 EIF5A2Q9GZV4 153 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms