RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 IGHV3-73A0A0B4J1V6 119 aa2.45□□□□□ -2.02
NIPBL-207ENST00000513819 A8MWP4 228 aa2.45□□□□□ -2.02
NIPBL-207ENST00000513819 NCR3O14931 201 aa2.45□□□□□ -2.02
NIPBL-207ENST00000513819 MIR22HGQ0VDD5 57 aa2.45□□□□□ -2.02
NIPBL-207ENST00000513819 KPRPQ5T749 579 aaPredicted RBP2.45□□□□□ -2.02
NIPBL-207ENST00000513819 LINC00208Q96KT6 92 aa2.45□□□□□ -2.02
NIPBL-207ENST00000513819 LENEPQ9Y5L5 61 aa2.45□□□□□ -2.02
NIPBL-207ENST00000513819 IGKV1OR2-108A0A075B7D4 117 aa2.44□□□□□ -2.02
NIPBL-207ENST00000513819 IGHV3-15A0A0B4J1V0 119 aa2.44□□□□□ -2.02
NIPBL-207ENST00000513819 IGKV2-29A2NJV5 120 aaPredicted RBP2.44□□□□□ -2.02
NIPBL-207ENST00000513819 NNATQ16517 81 aa2.44□□□□□ -2.02
NIPBL-207ENST00000513819 DEFB114Q30KQ6 69 aa2.44□□□□□ -2.02
NIPBL-207ENST00000513819 SPINK9Q5DT21 86 aa2.44□□□□□ -2.02
NIPBL-207ENST00000513819 TMEM105Q8N8V8 129 aa2.44□□□□□ -2.02
NIPBL-207ENST00000513819 LINC00308Q8TCZ7 52 aa2.44□□□□□ -2.02
NIPBL-207ENST00000513819 TTTY12Q9BZ98 90 aa2.44□□□□□ -2.02
NIPBL-207ENST00000513819 COL4A2P08572 1712 aa2.44□□□□□ -2.02
NIPBL-207ENST00000513819 MYO7AQ13402 2215 aa2.44□□□□□ -2.02
NIPBL-207ENST00000513819 MDC1Q14676 2089 aaKnown RBP2.43□□□□□ -2.02
NIPBL-207ENST00000513819 DSCAML1Q8TD84 2053 aa2.43□□□□□ -2.02
NIPBL-207ENST00000513819 DSCAMO60469 2012 aa2.43□□□□□ -2.02
NIPBL-207ENST00000513819 IGHV1-3A0A0C4DH29 117 aa2.43□□□□□ -2.02
NIPBL-207ENST00000513819 K7ERS5 55 aa2.43□□□□□ -2.02
NIPBL-207ENST00000513819 SPINK7P58062 85 aa2.43□□□□□ -2.02
NIPBL-207ENST00000513819 FAM27BQ5VT28 67 aa2.43□□□□□ -2.02
NIPBL-207ENST00000513819 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.43□□□□□ -2.02
NIPBL-207ENST00000513819 Q8TAT8 98 aa2.43□□□□□ -2.02
NIPBL-207ENST00000513819 COX7B2Q8TF08 81 aa2.43□□□□□ -2.02
NIPBL-207ENST00000513819 KLK9Q9UKQ9 250 aa2.43□□□□□ -2.02
NIPBL-207ENST00000513819 COL4A5P29400 1685 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 A8MUU9 505 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 IGKV1-17P01599 117 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 IGHV3-53P01767 116 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 KRTAP10-8P60410 259 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 HAMPP81172 84 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 SPAG11BQ08648 103 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 SPAG11AQ6PDA7 123 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 IGFL1Q6UW32 110 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 C20orf166-AS1Q96NR2 134 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 FAM215AQ9Y5M1 114 aa2.42□□□□□ -2.02
NIPBL-207ENST00000513819 INTS1Q8N201 2190 aaKnown RBP2.42□□□□□ -2.02
NIPBL-207ENST00000513819 TNRC6BQ9UPQ9 1833 aaKnown RBP2.41□□□□□ -2.02
NIPBL-207ENST00000513819 IGHV1-18A0A0C4DH31 117 aa2.41□□□□□ -2.02
NIPBL-207ENST00000513819 NDUFA1O15239 70 aa2.41□□□□□ -2.02
NIPBL-207ENST00000513819 IGKV4-1P06312 121 aa2.41□□□□□ -2.02
NIPBL-207ENST00000513819 ST20-AS1Q8NBB2 130 aa2.41□□□□□ -2.02
NIPBL-207ENST00000513819 COL27A1Q8IZC6 1860 aaPredicted RBP2.41□□□□□ -2.02
NIPBL-207ENST00000513819 IGLV10-54A0A075B6I4 117 aa2.4□□□□□ -2.03
NIPBL-207ENST00000513819 IGKV1D-37A0A075B6S9 117 aa2.4□□□□□ -2.03
NIPBL-207ENST00000513819 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
NIPBL-207ENST00000513819 PRCDQ00LT1 54 aa2.4□□□□□ -2.03
NIPBL-207ENST00000513819 KRTAP25-1Q3LHN0 102 aa2.4□□□□□ -2.03
NIPBL-207ENST00000513819 KRTAP13-2Q52LG2 175 aa2.4□□□□□ -2.03
NIPBL-207ENST00000513819 Q6ZTI0 123 aa2.4□□□□□ -2.03
NIPBL-207ENST00000513819 WFDC10AQ9H1F0 79 aa2.4□□□□□ -2.03
NIPBL-207ENST00000513819 MPDZO75970 2070 aa2.4□□□□□ -2.03
NIPBL-207ENST00000513819 SHANK1Q9Y566 2161 aa2.39□□□□□ -2.03
NIPBL-207ENST00000513819 H0Y9P7 68 aa2.39□□□□□ -2.03
NIPBL-207ENST00000513819 H3BQ85 93 aa2.39□□□□□ -2.03
NIPBL-207ENST00000513819 NDUFA4O00483 81 aa2.39□□□□□ -2.03
NIPBL-207ENST00000513819 IGHV1-46P01743 117 aa2.39□□□□□ -2.03
NIPBL-207ENST00000513819 DEFB113Q30KQ7 82 aa2.39□□□□□ -2.03
NIPBL-207ENST00000513819 KRTAP26-1Q6PEX3 210 aa2.39□□□□□ -2.03
NIPBL-207ENST00000513819 MYO7BQ6PIF6 2116 aa2.39□□□□□ -2.03
NIPBL-207ENST00000513819 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.38□□□□□ -2.03
NIPBL-207ENST00000513819 IGKV3D-11A0A0A0MRZ8 115 aa2.38□□□□□ -2.03
NIPBL-207ENST00000513819 ETDCA0A1B0GVM5 59 aa2.38□□□□□ -2.03
NIPBL-207ENST00000513819 H3BPC8 53 aa2.38□□□□□ -2.03
NIPBL-207ENST00000513819 POLR2KP53803 58 aaKnown RBP2.38□□□□□ -2.03
NIPBL-207ENST00000513819 C1orf137Q5JT78 98 aa2.38□□□□□ -2.03
NIPBL-207ENST00000513819 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
NIPBL-207ENST00000513819 SPATA8Q6RVD6 105 aa2.38□□□□□ -2.03
NIPBL-207ENST00000513819 SMIM11BQ8TCY0 68 aa2.38□□□□□ -2.03
NIPBL-207ENST00000513819 KCNQ1DNQ9H478 68 aa2.38□□□□□ -2.03
NIPBL-207ENST00000513819 IGHV3-64A0A075B6Q5 118 aa2.37□□□□□ -2.03
NIPBL-207ENST00000513819 TRGV2A0A075B6R0 118 aa2.37□□□□□ -2.03
NIPBL-207ENST00000513819 LINC00959A0A1B0GUT2 108 aa2.37□□□□□ -2.03
NIPBL-207ENST00000513819 ODF3BA8MYP8 253 aa2.37□□□□□ -2.03
NIPBL-207ENST00000513819 PLXNB1O43157 2135 aa2.37□□□□□ -2.03
NIPBL-207ENST00000513819 PI4KAP42356 2102 aa2.37□□□□□ -2.03
NIPBL-207ENST00000513819 ESPL1Q14674 2120 aa2.37□□□□□ -2.03
NIPBL-207ENST00000513819 COA5Q86WW8 74 aa2.37□□□□□ -2.03
NIPBL-207ENST00000513819 GAFA1Q96PS6 74 aa2.37□□□□□ -2.03
NIPBL-207ENST00000513819 SPTBP11277 2137 aa2.36□□□□□ -2.03
NIPBL-207ENST00000513819 CCL18P55774 89 aa2.36□□□□□ -2.03
NIPBL-207ENST00000513819 RPL39LQ96EH5 51 aaKnown RBP2.36□□□□□ -2.03
NIPBL-207ENST00000513819 SPRR4Q96PI1 79 aa2.36□□□□□ -2.03
NIPBL-207ENST00000513819 GPR179Q6PRD1 2367 aa2.36□□□□□ -2.03
NIPBL-207ENST00000513819 GOLGA4Q13439 2230 aaKnown RBP2.36□□□□□ -2.03
NIPBL-207ENST00000513819 FREM3P0C091 2139 aa2.35□□□□□ -2.03
NIPBL-207ENST00000513819 CEP192Q8TEP8 1941 aa2.35□□□□□ -2.03
NIPBL-207ENST00000513819 MUC4Q99102 2169 aa2.35□□□□□ -2.03
NIPBL-207ENST00000513819 TRGV4A0A0C4DH28 118 aa2.35□□□□□ -2.03
NIPBL-207ENST00000513819 ERHP84090 104 aaKnown RBP2.35□□□□□ -2.03
NIPBL-207ENST00000513819 DMAC1Q96GE9 116 aa2.35□□□□□ -2.03
NIPBL-207ENST00000513819 ARHGAP32A7KAX9 2087 aa2.34□□□□□ -2.03
NIPBL-207ENST00000513819 IGKV3-7A0A075B6H7 116 aa2.34□□□□□ -2.03
NIPBL-207ENST00000513819 NUPR2A6NF83 97 aa2.34□□□□□ -2.03
NIPBL-207ENST00000513819 H3BRN7 92 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms