RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 DPM2O94777 84 aa7.28□□□□□ -1.24
HTT-213ENST00000513806 IGKCP01834 107 aa7.28□□□□□ -1.24
HTT-213ENST00000513806 PRSS2P07478 247 aa7.28□□□□□ -1.24
HTT-213ENST00000513806 C6orf48Q9UBA6 75 aa7.28□□□□□ -1.24
HTT-213ENST00000513806 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.27□□□□□ -1.25
HTT-213ENST00000513806 IGLV5-39A0A0G2JS06 123 aa7.27□□□□□ -1.25
HTT-213ENST00000513806 NDUFA1O15239 70 aa7.27□□□□□ -1.25
HTT-213ENST00000513806 C6orf226Q5I0X4 101 aa7.27□□□□□ -1.25
HTT-213ENST00000513806 LINC01545Q5VT33 79 aa7.27□□□□□ -1.25
HTT-213ENST00000513806 PET117Q6UWS5 81 aa7.27□□□□□ -1.25
HTT-213ENST00000513806 Q8IZM0 81 aa7.27□□□□□ -1.25
HTT-213ENST00000513806 ATOH7Q8N100 152 aa7.27□□□□□ -1.25
HTT-213ENST00000513806 C2orf48Q96LS8 159 aa7.27□□□□□ -1.25
HTT-213ENST00000513806 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.27□□□□□ -1.25
HTT-213ENST00000513806 HSPG2P98160 4391 aa7.27□□□□□ -1.25
HTT-213ENST00000513806 IGKV2-24A0A0C4DH68 120 aa7.26□□□□□ -1.25
HTT-213ENST00000513806 TSPEAR-AS2P59090 65 aa7.26□□□□□ -1.25
HTT-213ENST00000513806 SDIM1Q6ZPB5 146 aa7.26□□□□□ -1.25
HTT-213ENST00000513806 A0A096LNI7 61 aa7.25□□□□□ -1.25
HTT-213ENST00000513806 PLNP26678 52 aa7.25□□□□□ -1.25
HTT-213ENST00000513806 CKS1BP61024 79 aa7.25□□□□□ -1.25
HTT-213ENST00000513806 STPG4Q8N801 248 aa7.25□□□□□ -1.25
HTT-213ENST00000513806 ZNF625Q96I27 306 aaPredicted RBP7.25□□□□□ -1.25
HTT-213ENST00000513806 BIRC6Q9NR09 4857 aa7.25□□□□□ -1.25
HTT-213ENST00000513806 RPL18AQ02543 176 aaKnown RBP7.24□□□□□ -1.25
HTT-213ENST00000513806 GAGE2BQ13066 116 aa7.24□□□□□ -1.25
HTT-213ENST00000513806 XGP55808 180 aa7.23□□□□□ -1.25
HTT-213ENST00000513806 KRTAP17-1Q9BYP8 105 aa7.23□□□□□ -1.25
HTT-213ENST00000513806 MAJINQ3KP22 176 aa7.22□□□□□ -1.25
HTT-213ENST00000513806 IGKV2D-26A0A0A0MRZ7 120 aa7.21□□□□□ -1.26
HTT-213ENST00000513806 LOC107984640A0A0U1RRK4 108 aa7.21□□□□□ -1.26
HTT-213ENST00000513806 LEPROTO15243 131 aa7.21□□□□□ -1.26
HTT-213ENST00000513806 GAGE2EQ4V326 116 aa7.21□□□□□ -1.26
HTT-213ENST00000513806 Q6ZRP5 223 aa7.21□□□□□ -1.26
HTT-213ENST00000513806 Q6ZSA8 131 aa7.21□□□□□ -1.26
HTT-213ENST00000513806 SCXQ7RTU7 201 aa7.21□□□□□ -1.26
HTT-213ENST00000513806 TTTY13Q9BZ97 58 aa7.21□□□□□ -1.26
HTT-213ENST00000513806 GAGE2DQ9UEU5 116 aa7.21□□□□□ -1.26
HTT-213ENST00000513806 KIAA1109Q2LD37 5005 aa7.21□□□□□ -1.26
HTT-213ENST00000513806 TRBV30A0A0K0K1B3 111 aa7.2□□□□□ -1.26
HTT-213ENST00000513806 A0A0U1RRA0 63 aa7.2□□□□□ -1.26
HTT-213ENST00000513806 C20orf202A1L168 122 aa7.2□□□□□ -1.26
HTT-213ENST00000513806 F8WDY8 70 aa7.2□□□□□ -1.26
HTT-213ENST00000513806 SMR3BP02814 79 aaPredicted RBP7.2□□□□□ -1.26
HTT-213ENST00000513806 PTTG1IPP53801 180 aa7.2□□□□□ -1.26
HTT-213ENST00000513806 HERVK_113P61574 105 aa7.2□□□□□ -1.26
HTT-213ENST00000513806 RNF151Q2KHN1 245 aa7.2□□□□□ -1.26
HTT-213ENST00000513806 ANKRD39Q53RE8 183 aa7.2□□□□□ -1.26
HTT-213ENST00000513806 CIRBP-AS1Q8TBR5 109 aa7.2□□□□□ -1.26
HTT-213ENST00000513806 SPACA4Q8TDM5 124 aa7.2□□□□□ -1.26
HTT-213ENST00000513806 DPH3Q96FX2 82 aa7.2□□□□□ -1.26
HTT-213ENST00000513806 FAM168BA1KXE4 195 aa7.19□□□□□ -1.26
HTT-213ENST00000513806 J3QQQ9 107 aa7.19□□□□□ -1.26
HTT-213ENST00000513806 SCGB1D1O95968 90 aa7.19□□□□□ -1.26
HTT-213ENST00000513806 PFN2P35080 140 aa7.19□□□□□ -1.26
HTT-213ENST00000513806 CXCL5P42830 114 aa7.19□□□□□ -1.26
HTT-213ENST00000513806 NDUFA12Q9UI09 145 aa7.19□□□□□ -1.26
HTT-213ENST00000513806 A0A087WYN8 130 aa7.18□□□□□ -1.26
HTT-213ENST00000513806 A0A1W2PNN7 141 aa7.18□□□□□ -1.26
HTT-213ENST00000513806 E9PLD3 99 aa7.18□□□□□ -1.26
HTT-213ENST00000513806 PLEKHB2Q96CS7 222 aa7.18□□□□□ -1.26
HTT-213ENST00000513806 XAGE1AQ9HD64 81 aa7.18□□□□□ -1.26
HTT-213ENST00000513806 RYR1P21817 5038 aa7.18□□□□□ -1.26
HTT-213ENST00000513806 NDUFC2-KCTD14E9PQ53 114 aa7.17□□□□□ -1.26
HTT-213ENST00000513806 TLX1NBP0CAT3 122 aa7.17□□□□□ -1.26
HTT-213ENST00000513806 LGALS3P17931 250 aaKnown RBP7.17□□□□□ -1.26
HTT-213ENST00000513806 CIRBPQ14011 172 aaKnown RBP7.17□□□□□ -1.26
HTT-213ENST00000513806 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
HTT-213ENST00000513806 ERG28Q9UKR5 140 aa7.17□□□□□ -1.26
HTT-213ENST00000513806 CDK2AP2O75956 126 aa7.16□□□□□ -1.26
HTT-213ENST00000513806 SMIM13P0DJ93 91 aa7.16□□□□□ -1.26
HTT-213ENST00000513806 FAT1Q14517 4588 aa7.16□□□□□ -1.26
HTT-213ENST00000513806 NMUP48645 174 aa7.15□□□□□ -1.26
HTT-213ENST00000513806 MEIG1Q5JSS6 88 aa7.15□□□□□ -1.26
HTT-213ENST00000513806 FAM19A5Q7Z5A7 132 aaPredicted RBP7.15□□□□□ -1.26
HTT-213ENST00000513806 KRTAP7-1Q8IUC3 87 aa7.15□□□□□ -1.26
HTT-213ENST00000513806 TP73-AS1Q9UF72 201 aa7.15□□□□□ -1.26
HTT-213ENST00000513806 MYMXA0A1B0GTQ4 84 aa7.14□□□□□ -1.27
HTT-213ENST00000513806 LINC00158P58513 81 aa7.14□□□□□ -1.27
HTT-213ENST00000513806 SERTAD4-AS1Q5TG53 156 aa7.14□□□□□ -1.27
HTT-213ENST00000513806 PCP2Q8IVA1 136 aa7.14□□□□□ -1.27
HTT-213ENST00000513806 DAND5Q8N907 189 aa7.14□□□□□ -1.27
HTT-213ENST00000513806 A0A0J9YXY3 114 aa7.12□□□□□ -1.27
HTT-213ENST00000513806 ZNF815PA8K554 130 aa7.12□□□□□ -1.27
HTT-213ENST00000513806 AKR1D1P51857 326 aa7.12□□□□□ -1.27
HTT-213ENST00000513806 PHF5AQ7RTV0 110 aaKnown RBP7.12□□□□□ -1.27
HTT-213ENST00000513806 Q8NDZ9 215 aa7.12□□□□□ -1.27
HTT-213ENST00000513806 SND1-IT1Q9HBX3 110 aa7.12□□□□□ -1.27
HTT-213ENST00000513806 PLAC8Q9NZF1 115 aa7.12□□□□□ -1.27
HTT-213ENST00000513806 NPC2P61916 151 aa7.11□□□□□ -1.27
HTT-213ENST00000513806 HERV-K104P63124 156 aa7.11□□□□□ -1.27
HTT-213ENST00000513806 JOSD1Q15040 202 aaPredicted RBP7.11□□□□□ -1.27
HTT-213ENST00000513806 PYY3Q5JQD4 70 aa7.11□□□□□ -1.27
HTT-213ENST00000513806 LINC00528Q8N1L1 170 aa7.11□□□□□ -1.27
HTT-213ENST00000513806 MIR7-3HGQ8N6C7 128 aa7.11□□□□□ -1.27
HTT-213ENST00000513806 KRTAP4-5Q9BYR2 181 aa7.11□□□□□ -1.27
HTT-213ENST00000513806 PKIGQ9Y2B9 76 aa7.11□□□□□ -1.27
HTT-213ENST00000513806 VPS13BQ7Z7G8 4022 aa7.11□□□□□ -1.27
HTT-213ENST00000513806 ADAMTSL4-AS1Q5T5F5 129 aa7.1□□□□□ -1.27
HTT-213ENST00000513806 LINC00474Q9P2X8 69 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms