RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 ATP5EP56381 51 aaPredicted RBP-0.29□□□□□ -2.46
DHFR-207ENST00000513314 DEFB135Q30KP9 77 aa-0.29□□□□□ -2.46
DHFR-207ENST00000513314 RPL13AP3Q6NVV1 102 aa-0.29□□□□□ -2.46
DHFR-207ENST00000513314 DEFB123Q8N688 67 aa-0.29□□□□□ -2.46
DHFR-207ENST00000513314 LINC01600Q96MT4 127 aa-0.29□□□□□ -2.46
DHFR-207ENST00000513314 ARHGEF12Q9NZN5 1544 aa-0.29□□□□□ -2.46
DHFR-207ENST00000513314 NBPF19A0A087WUL8 3843 aa-0.29□□□□□ -2.46
DHFR-207ENST00000513314 ANKRD11Q6UB99 2663 aaPredicted RBP-0.3□□□□□ -2.46
DHFR-207ENST00000513314 FAT2Q9NYQ8 4349 aa-0.3□□□□□ -2.46
DHFR-207ENST00000513314 MUC17Q685J3 4493 aa-0.3□□□□□ -2.46
DHFR-207ENST00000513314 NAP1L6A6NFF2 107 aa-0.3□□□□□ -2.46
DHFR-207ENST00000513314 CPSF4LA6NMK7 179 aaKnown RBP-0.3□□□□□ -2.46
DHFR-207ENST00000513314 SEC11AP67812 179 aa-0.3□□□□□ -2.46
DHFR-207ENST00000513314 Q0VG73 95 aa-0.3□□□□□ -2.46
DHFR-207ENST00000513314 DPH3P1Q9H4G8 78 aa-0.3□□□□□ -2.46
DHFR-207ENST00000513314 CDC42SE2Q9NRR3 84 aa-0.3□□□□□ -2.46
DHFR-207ENST00000513314 DNAH6Q9C0G6 4158 aa-0.3□□□□□ -2.46
DHFR-207ENST00000513314 LAMA1P25391 3075 aa-0.3□□□□□ -2.46
DHFR-207ENST00000513314 ITPR1Q14643 2758 aa-0.3□□□□□ -2.46
DHFR-207ENST00000513314 KDM5AP29375 1690 aaKnown RBP-0.3□□□□□ -2.46
DHFR-207ENST00000513314 TCHHQ07283 1943 aa-0.3□□□□□ -2.46
DHFR-207ENST00000513314 DNHD1Q96M86 4753 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 PCNX1Q96RV3 2341 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 LINC00959A0A1B0GUT2 108 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 CRYM-AS1A6NIL9 109 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 S100A1P23297 94 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 SNCAP37840 140 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 DEFB112Q30KQ8 113 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 FAM167A-AS1Q96KT0 104 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 SPRR4Q96PI1 79 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 VAMP8Q9BV40 100 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 PRO1854Q9UHT4 67 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 PKHD1L1Q86WI1 4243 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 COL6A5A8TX70 2615 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 GAPVD1Q14C86 1478 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 NSD3Q9BZ95 1437 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 PLECQ15149 4684 aaKnown RBP-0.31□□□□□ -2.46
DHFR-207ENST00000513314 SVEP1Q4LDE5 3571 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 RAPGEF6Q8TEU7 1601 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 RIF1Q5UIP0 2472 aaKnown RBP-0.31□□□□□ -2.46
DHFR-207ENST00000513314 BTAF1O14981 1849 aa-0.31□□□□□ -2.46
DHFR-207ENST00000513314 DNAH3Q8TD57 4116 aa-0.32□□□□□ -2.46
DHFR-207ENST00000513314 SETBP1Q9Y6X0 1596 aa-0.32□□□□□ -2.46
DHFR-207ENST00000513314 CCDC168Q8NDH2 2452 aa-0.32□□□□□ -2.46
DHFR-207ENST00000513314 RIMS1Q86UR5 1692 aaKnown RBP-0.32□□□□□ -2.46
DHFR-207ENST00000513314 DNAH2Q9P225 4427 aa-0.32□□□□□ -2.46
DHFR-207ENST00000513314 KRTDAPP60985 99 aa-0.32□□□□□ -2.46
DHFR-207ENST00000513314 SPRR2FQ96RM1 72 aa-0.32□□□□□ -2.46
DHFR-207ENST00000513314 CRIPTQ9P021 101 aa-0.32□□□□□ -2.46
DHFR-207ENST00000513314 ABCA13Q86UQ4 5058 aa-0.32□□□□□ -2.46
DHFR-207ENST00000513314 KIAA0556O60303 1618 aa-0.32□□□□□ -2.46
DHFR-207ENST00000513314 CEP295Q9C0D2 2601 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 SPG11Q96JI7 2443 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 HMGXB3Q12766 1538 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 MBD5Q9P267 1494 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 FAT3Q8TDW7 4589 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 H0YGG7 62 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 PPP3R1P63098 170 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 LCN9Q8WX39 176 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 GNG8Q9UK08 70 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 IER3IP1Q9Y5U9 82 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 COL12A1Q99715 3063 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 ITPR2Q14571 2701 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 DNAJC13O75165 2243 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 MTORP42345 2549 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 CELSR3Q9NYQ7 3312 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 TULP4Q9NRJ4 1543 aa-0.33□□□□□ -2.46
DHFR-207ENST00000513314 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.33□□□□□ -2.466e-7■□□□□ 10.8
DHFR-207ENST00000513314 NBEAL2Q6ZNJ1 2754 aa-0.34□□□□□ -2.46
DHFR-207ENST00000513314 LRRK2Q5S007 2527 aa-0.34□□□□□ -2.46
DHFR-207ENST00000513314 FAM223BA6NKX1 122 aa-0.34□□□□□ -2.46
DHFR-207ENST00000513314 UTP20O75691 2785 aaKnown RBP-0.34□□□□□ -2.46
DHFR-207ENST00000513314 SAA2P0DJI9 122 aaPredicted RBP-0.34□□□□□ -2.46
DHFR-207ENST00000513314 GNG4P50150 75 aa-0.34□□□□□ -2.46
DHFR-207ENST00000513314 DEFA5Q01523 94 aa-0.34□□□□□ -2.46
DHFR-207ENST00000513314 C9orf62Q8N4C0 152 aa-0.34□□□□□ -2.46
DHFR-207ENST00000513314 NBEAQ8NFP9 2946 aa-0.34□□□□□ -2.46
DHFR-207ENST00000513314 LAMA3Q16787 3333 aa-0.34□□□□□ -2.46
DHFR-207ENST00000513314 FRYQ5TBA9 3013 aa-0.34□□□□□ -2.46
DHFR-207ENST00000513314 CFAP46Q8IYW2 2715 aa-0.34□□□□□ -2.46
DHFR-207ENST00000513314 SLIT1O75093 1534 aa-0.34□□□□□ -2.46
DHFR-207ENST00000513314 GCN1Q92616 2671 aaKnown RBP-0.34□□□□□ -2.46
DHFR-207ENST00000513314 FMN2Q9NZ56 1722 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 ADAMTS12P58397 1594 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 SMG6Q86US8 1419 aaKnown RBP-0.35□□□□□ -2.47
DHFR-207ENST00000513314 SCAPERQ9BY12 1400 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 ANK3Q12955 4377 aaKnown RBP-0.35□□□□□ -2.47
DHFR-207ENST00000513314 A0A1B0GU69 56 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 H3BNG1 76 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 I3L3M4 83 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 MRPS10P82664 201 aaKnown RBP-0.35□□□□□ -2.47
DHFR-207ENST00000513314 H1FX-AS1Q4G0G2 97 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 GTF2H5Q6ZYL4 71 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 VPS13DQ5THJ4 4388 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 PTPN23Q9H3S7 1636 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 MGAM2Q2M2H8 2515 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 DMXL1Q9Y485 3027 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 AKAP9Q99996 3911 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 CCDC141Q6ZP82 1450 aa-0.35□□□□□ -2.47
DHFR-207ENST00000513314 MAGI1Q96QZ7 1491 aaPredicted RBP-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms