RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 HIST1H2BMQ99879 126 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 SERF1AO75920 110 aa8.53□□□□□ -1.04
SPCS3-204ENST00000513139 XCL1P47992 114 aa8.53□□□□□ -1.04
SPCS3-204ENST00000513139 ERASQ7Z444 233 aa8.53□□□□□ -1.04
SPCS3-204ENST00000513139 FAM19A2Q8N3H0 131 aa8.53□□□□□ -1.04
SPCS3-204ENST00000513139 CHCHD1Q96BP2 118 aaKnown RBP8.53□□□□□ -1.04
SPCS3-204ENST00000513139 TMEM141Q96I45 108 aa8.53□□□□□ -1.04
SPCS3-204ENST00000513139 CCL25O15444 150 aa8.52□□□□□ -1.05
SPCS3-204ENST00000513139 HBDP02042 147 aa8.52□□□□□ -1.05
SPCS3-204ENST00000513139 SS18Q15532 418 aa8.52□□□□□ -1.05
SPCS3-204ENST00000513139 LINC00173Q6ZV60 143 aa8.52□□□□□ -1.05
SPCS3-204ENST00000513139 VCX2Q9H322 139 aa8.52□□□□□ -1.05
SPCS3-204ENST00000513139 IFITM10A6NMD0 228 aa8.51□□□□□ -1.05
SPCS3-204ENST00000513139 PDZD11Q5EBL8 140 aa8.51□□□□□ -1.05
SPCS3-204ENST00000513139 AMELXQ99217 191 aa8.51□□□□□ -1.05
SPCS3-204ENST00000513139 TIMM17AQ99595 171 aa8.51□□□□□ -1.05
SPCS3-204ENST00000513139 C1orf196B1AJZ1 125 aa8.5□□□□□ -1.05
SPCS3-204ENST00000513139 HSBP1O75506 76 aa8.5□□□□□ -1.05
SPCS3-204ENST00000513139 FOXI1Q12951 378 aa8.5□□□□□ -1.05
SPCS3-204ENST00000513139 TEX43Q6ZNM6 134 aa8.5□□□□□ -1.05
SPCS3-204ENST00000513139 Q6ZN92 141 aa8.49□□□□□ -1.05
SPCS3-204ENST00000513139 CARD19Q96LW7 228 aa8.49□□□□□ -1.05
SPCS3-204ENST00000513139 LINC01549A6NIU2 74 aa8.48□□□□□ -1.05
SPCS3-204ENST00000513139 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.48□□□□□ -1.05
SPCS3-204ENST00000513139 NPSP0C0P6 89 aa8.48□□□□□ -1.05
SPCS3-204ENST00000513139 UBE2D1P51668 147 aa8.48□□□□□ -1.05
SPCS3-204ENST00000513139 CD164L2Q6UWJ8 174 aa8.48□□□□□ -1.05
SPCS3-204ENST00000513139 PTTG1IPP53801 180 aa8.47□□□□□ -1.05
SPCS3-204ENST00000513139 NDUFA6P56556 154 aa8.47□□□□□ -1.05
SPCS3-204ENST00000513139 PAPPA-AS1Q5QFB9 102 aa8.47□□□□□ -1.05
SPCS3-204ENST00000513139 LINC00242Q5T6M2 205 aa8.47□□□□□ -1.05
SPCS3-204ENST00000513139 C5orf38Q86SI9 138 aa8.47□□□□□ -1.05
SPCS3-204ENST00000513139 C2orf88Q9BSF0 95 aa8.47□□□□□ -1.05
SPCS3-204ENST00000513139 CST9LQ9H4G1 147 aa8.47□□□□□ -1.05
SPCS3-204ENST00000513139 IGHV1-58A0A0C4DH39 117 aa8.46□□□□□ -1.06
SPCS3-204ENST00000513139 PRR26Q8N8Z3 221 aa8.46□□□□□ -1.06
SPCS3-204ENST00000513139 FAT4Q6V0I7 4981 aa8.45□□□□□ -1.06
SPCS3-204ENST00000513139 ATP5LO75964 103 aa8.45□□□□□ -1.06
SPCS3-204ENST00000513139 FABP4P15090 132 aa8.45□□□□□ -1.06
SPCS3-204ENST00000513139 SYCNQ0VAF6 134 aa8.45□□□□□ -1.06
SPCS3-204ENST00000513139 PMVKQ15126 192 aa8.45□□□□□ -1.06
SPCS3-204ENST00000513139 DIRC1Q969H9 104 aa8.45□□□□□ -1.06
SPCS3-204ENST00000513139 IGHV3OR16-9A0A0B4J2B5 98 aa8.44□□□□□ -1.06
SPCS3-204ENST00000513139 LOC107984640A0A0U1RRK4 108 aa8.44□□□□□ -1.06
SPCS3-204ENST00000513139 C9orf118A6NHY6 69 aa8.44□□□□□ -1.06
SPCS3-204ENST00000513139 COX7A2LO14548 114 aa8.44□□□□□ -1.06
SPCS3-204ENST00000513139 IFI27L1Q96BM0 104 aa8.44□□□□□ -1.06
SPCS3-204ENST00000513139 IGLV1-50A0A075B6I6 118 aa8.43□□□□□ -1.06
SPCS3-204ENST00000513139 LEPROTL1O95214 131 aa8.43□□□□□ -1.06
SPCS3-204ENST00000513139 MALP21145 153 aa8.43□□□□□ -1.06
SPCS3-204ENST00000513139 PRR4Q16378 134 aa8.43□□□□□ -1.06
SPCS3-204ENST00000513139 COA6Q5JTJ3 125 aaKnown RBP8.43□□□□□ -1.06
SPCS3-204ENST00000513139 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
SPCS3-204ENST00000513139 A0A1W2PNN7 141 aa8.42□□□□□ -1.06
SPCS3-204ENST00000513139 GAGE2BQ13066 116 aa8.42□□□□□ -1.06
SPCS3-204ENST00000513139 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
SPCS3-204ENST00000513139 FAM19A3Q7Z5A8 133 aa8.42□□□□□ -1.06
SPCS3-204ENST00000513139 GEMIN7Q9H840 131 aaKnown RBP8.41□□□□□ -1.06
SPCS3-204ENST00000513139 A0A087WZ39 114 aa8.4□□□□□ -1.06
SPCS3-204ENST00000513139 TINCRA0A1B0GVN0 87 aa8.4□□□□□ -1.06
SPCS3-204ENST00000513139 H0Y8G0 127 aa8.4□□□□□ -1.06
SPCS3-204ENST00000513139 IGLV7-43P04211 117 aa8.4□□□□□ -1.06
SPCS3-204ENST00000513139 CDKN2A-AS1Q9UH64 79 aa8.4□□□□□ -1.06
SPCS3-204ENST00000513139 HSPB8Q9UJY1 196 aa8.4□□□□□ -1.06
SPCS3-204ENST00000513139 IGLV4-69A0A075B6H9 119 aa8.39□□□□□ -1.07
SPCS3-204ENST00000513139 H0Y9J4 135 aa8.39□□□□□ -1.07
SPCS3-204ENST00000513139 HERVK_113P63121 156 aa8.39□□□□□ -1.07
SPCS3-204ENST00000513139 SEC11AP67812 179 aa8.39□□□□□ -1.07
SPCS3-204ENST00000513139 C9orf116Q5BN46 136 aaPredicted RBP8.39□□□□□ -1.07
SPCS3-204ENST00000513139 LINC00469Q8N7U9 141 aa8.39□□□□□ -1.07
SPCS3-204ENST00000513139 CHTOPQ9Y3Y2 248 aaKnown RBP8.39□□□□□ -1.07
SPCS3-204ENST00000513139 IGLC3P0DOY3 106 aa8.38□□□□□ -1.07
SPCS3-204ENST00000513139 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
SPCS3-204ENST00000513139 C11orf86A6NJI1 115 aa8.37□□□□□ -1.07
SPCS3-204ENST00000513139 APOMO95445 188 aa8.37□□□□□ -1.07
SPCS3-204ENST00000513139 KRTAP19-4Q3LI73 84 aa8.37□□□□□ -1.07
SPCS3-204ENST00000513139 ORAOV1Q8WV07 137 aa8.37□□□□□ -1.07
SPCS3-204ENST00000513139 MRPL35Q9NZE8 188 aaKnown RBP8.37□□□□□ -1.07
SPCS3-204ENST00000513139 IGLV5-45A0A087WSX0 123 aa8.36□□□□□ -1.07
SPCS3-204ENST00000513139 KRTAP1-4P0C5Y4 121 aa8.36□□□□□ -1.07
SPCS3-204ENST00000513139 RPL13AP40429 203 aaKnown RBP8.36□□□□□ -1.07
SPCS3-204ENST00000513139 SPAG11BQ08648 103 aa8.36□□□□□ -1.07
SPCS3-204ENST00000513139 PHF5AQ7RTV0 110 aaKnown RBP8.36□□□□□ -1.07
SPCS3-204ENST00000513139 SPINK8P0C7L1 97 aa8.35□□□□□ -1.07
SPCS3-204ENST00000513139 ZNF22P17026 224 aaPredicted RBP8.35□□□□□ -1.07
SPCS3-204ENST00000513139 LINC01561Q8N1V8 128 aa8.35□□□□□ -1.07
SPCS3-204ENST00000513139 PMCHL2Q9BQD1 86 aa8.35□□□□□ -1.07
SPCS3-204ENST00000513139 MAP1LC3CQ9BXW4 147 aa8.35□□□□□ -1.07
SPCS3-204ENST00000513139 SMIM1B2RUZ4 78 aa8.34□□□□□ -1.07
SPCS3-204ENST00000513139 F8VRH5 84 aa8.34□□□□□ -1.07
SPCS3-204ENST00000513139 S100A6P06703 90 aa8.34□□□□□ -1.07
SPCS3-204ENST00000513139 SNRPEP62304 92 aaKnown RBP8.34□□□□□ -1.07
SPCS3-204ENST00000513139 KIAA0087Q14695 138 aa8.34□□□□□ -1.07
SPCS3-204ENST00000513139 HIST3H2BBQ8N257 126 aa8.34□□□□□ -1.07
SPCS3-204ENST00000513139 OR10D4PQ8NGN7 298 aa8.34□□□□□ -1.07
SPCS3-204ENST00000513139 C2orf48Q96LS8 159 aa8.34□□□□□ -1.07
SPCS3-204ENST00000513139 CAMK2N2Q96S95 79 aa8.34□□□□□ -1.07
SPCS3-204ENST00000513139 TOMM7Q9P0U1 55 aa8.34□□□□□ -1.07
SPCS3-204ENST00000513139 SYS1-DBNDD2H3BUS1 97 aa8.33□□□□□ -1.08
SPCS3-204ENST00000513139 TMEM170BQ5T4T1 132 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms