RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 LRCOL1A6NCL2 159 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 LINC01549A6NIU2 74 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 C11orf86A6NJI1 115 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 SYS1-DBNDD2H3BUS1 97 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 PSCAO43653 123 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 KRTDAPP60985 99 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 CD164L2Q6UWJ8 174 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 FAM19A3Q7Z5A8 133 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 C15orf56Q8N910 161 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 LINC00526Q96FQ7 95 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 C2orf88Q9BSF0 95 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 MRPL35Q9NZE8 188 aaKnown RBP3.34□□□□□ -1.87
MSH3-202ENST00000512258 CDKN2A-AS1Q9UH64 79 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 HSPB8Q9UJY1 196 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 CHTOPQ9Y3Y2 248 aaKnown RBP3.34□□□□□ -1.87
MSH3-202ENST00000512258 FRAS1Q86XX4 4008 aa3.34□□□□□ -1.87
MSH3-202ENST00000512258 A0A087WTM6 91 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 TRAV12-1A0A0B4J245 112 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 TINCRA0A1B0GVN0 87 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 USP17L23D6RBM5 183 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 SPINK8P0C7L1 97 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 IGLC3P0DOY3 106 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 ZNF22P17026 224 aaPredicted RBP3.33□□□□□ -1.88
MSH3-202ENST00000512258 S100A2P29034 98 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 PAPPA-AS1Q5QFB9 102 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 NFE4Q86UQ8 179 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 LINC00469Q8N7U9 141 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 OR10D4PQ8NGN7 298 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 RMI2Q96E14 147 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 PACRGQ96M98 296 aaPredicted RBP3.33□□□□□ -1.88
MSH3-202ENST00000512258 CHAC1Q9BUX1 264 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 MAP1LC3CQ9BXW4 147 aa3.33□□□□□ -1.88
MSH3-202ENST00000512258 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.32□□□□□ -1.88
MSH3-202ENST00000512258 IGHV3-64A0A075B6Q5 118 aa3.32□□□□□ -1.88
MSH3-202ENST00000512258 IGLV5-45A0A087WSX0 123 aa3.32□□□□□ -1.88
MSH3-202ENST00000512258 A0A087WZ39 114 aa3.32□□□□□ -1.88
MSH3-202ENST00000512258 F8VRH5 84 aa3.32□□□□□ -1.88
MSH3-202ENST00000512258 COX7A2LO14548 114 aa3.32□□□□□ -1.88
MSH3-202ENST00000512258 LINC01545Q5VT33 79 aa3.32□□□□□ -1.88
MSH3-202ENST00000512258 ATOH7Q8N100 152 aa3.32□□□□□ -1.88
MSH3-202ENST00000512258 GEMIN7Q9H840 131 aaKnown RBP3.32□□□□□ -1.88
MSH3-202ENST00000512258 DNAH17Q9UFH2 4485 aa3.32□□□□□ -1.88
MSH3-202ENST00000512258 SMIM1B2RUZ4 78 aa3.31□□□□□ -1.88
MSH3-202ENST00000512258 DPM2O94777 84 aa3.31□□□□□ -1.88
MSH3-202ENST00000512258 KRTAP10-8P60410 259 aa3.31□□□□□ -1.88
MSH3-202ENST00000512258 HERVK_113P63121 156 aa3.31□□□□□ -1.88
MSH3-202ENST00000512258 KIAA0087Q14695 138 aa3.31□□□□□ -1.88
MSH3-202ENST00000512258 LINC01620Q4KN68 170 aa3.31□□□□□ -1.88
MSH3-202ENST00000512258 TMEM170BQ5T4T1 132 aa3.31□□□□□ -1.88
MSH3-202ENST00000512258 PET117Q6UWS5 81 aa3.31□□□□□ -1.88
MSH3-202ENST00000512258 ORAOV1Q8WV07 137 aa3.31□□□□□ -1.88
MSH3-202ENST00000512258 FAT2Q9NYQ8 4349 aa3.31□□□□□ -1.88
MSH3-202ENST00000512258 GVQW2A0A096LPI5 108 aaPredicted RBP3.3□□□□□ -1.88
MSH3-202ENST00000512258 IGHV1-58A0A0C4DH39 117 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 hDV102S1A0JD36 115 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 TMEM223A0PJW6 202 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 IGKCP01834 107 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 TSPEAR-AS2P59090 65 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 SEC11AP67812 179 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 SPAG11BQ08648 103 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 MAJINQ3KP22 176 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 C2orf82Q6UX34 121 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 STPG4Q8N801 248 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 Q8N814 137 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 TOMM7Q9P0U1 55 aa3.3□□□□□ -1.88
MSH3-202ENST00000512258 DNAH11Q96DT5 4516 aa3.29□□□□□ -1.88
MSH3-202ENST00000512258 IGKV2D-26A0A0A0MRZ7 120 aa3.29□□□□□ -1.88
MSH3-202ENST00000512258 H3BRM9 83 aa3.29□□□□□ -1.88
MSH3-202ENST00000512258 SCGB1D1O95968 90 aa3.29□□□□□ -1.88
MSH3-202ENST00000512258 PLNP26678 52 aa3.29□□□□□ -1.88
MSH3-202ENST00000512258 UNQ6190/PRO20217Q6UXQ8 127 aa3.29□□□□□ -1.88
MSH3-202ENST00000512258 Q6ZRU5 148 aa3.29□□□□□ -1.88
MSH3-202ENST00000512258 LINC00336Q6ZUF6 198 aa3.29□□□□□ -1.88
MSH3-202ENST00000512258 COX7B2Q8TF08 81 aa3.29□□□□□ -1.88
MSH3-202ENST00000512258 PKD1P98161 4303 aa3.29□□□□□ -1.88
MSH3-202ENST00000512258 LOC105371267A0A1B0GV96 52 aa3.28□□□□□ -1.88
MSH3-202ENST00000512258 C20orf202A1L168 122 aa3.28□□□□□ -1.88
MSH3-202ENST00000512258 APOMO95445 188 aa3.28□□□□□ -1.88
MSH3-202ENST00000512258 AKR1D1P51857 326 aa3.28□□□□□ -1.88
MSH3-202ENST00000512258 C9orf116Q5BN46 136 aaPredicted RBP3.28□□□□□ -1.88
MSH3-202ENST00000512258 PYY3Q5JQD4 70 aa3.28□□□□□ -1.88
MSH3-202ENST00000512258 CFAP161Q6P656 301 aa3.28□□□□□ -1.88
MSH3-202ENST00000512258 LINC01561Q8N1V8 128 aa3.28□□□□□ -1.88
MSH3-202ENST00000512258 TTTY13Q9BZ97 58 aa3.28□□□□□ -1.88
MSH3-202ENST00000512258 TP73-AS1Q9UF72 201 aa3.28□□□□□ -1.88
MSH3-202ENST00000512258 HECTD4Q9Y4D8 3996 aa3.28□□□□□ -1.88
MSH3-202ENST00000512258 EPPK1P58107 5090 aaKnown RBP3.27□□□□□ -1.89
MSH3-202ENST00000512258 IGLV5-52A0A0A0MRZ9 124 aa3.27□□□□□ -1.89
MSH3-202ENST00000512258 LEPROTO15243 131 aa3.27□□□□□ -1.89
MSH3-202ENST00000512258 PRSS2P07478 247 aa3.27□□□□□ -1.89
MSH3-202ENST00000512258 KRTAP10-1P60331 282 aa3.27□□□□□ -1.89
MSH3-202ENST00000512258 SYCNQ0VAF6 134 aa3.27□□□□□ -1.89
MSH3-202ENST00000512258 JOSD1Q15040 202 aaPredicted RBP3.27□□□□□ -1.89
MSH3-202ENST00000512258 C14orf177Q52M58 125 aa3.27□□□□□ -1.89
MSH3-202ENST00000512258 C6orf226Q5I0X4 101 aa3.27□□□□□ -1.89
MSH3-202ENST00000512258 Q8IZM0 81 aa3.27□□□□□ -1.89
MSH3-202ENST00000512258 ZNF625Q96I27 306 aaPredicted RBP3.27□□□□□ -1.89
MSH3-202ENST00000512258 CAMK2N2Q96S95 79 aa3.27□□□□□ -1.89
MSH3-202ENST00000512258 C6orf48Q9UBA6 75 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms