RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 AKR1D1P51857 326 aa12.73□□□□□ -0.37
SMAD1-211ENST00000512019 Q8IZM0 81 aa12.73□□□□□ -0.37
SMAD1-211ENST00000512019 TOMM7Q9P0U1 55 aa12.73□□□□□ -0.37
SMAD1-211ENST00000512019 TMEM223A0PJW6 202 aa12.72□□□□□ -0.37
SMAD1-211ENST00000512019 LINC00526Q96FQ7 95 aa12.72□□□□□ -0.37
SMAD1-211ENST00000512019 IGLV5-39A0A0G2JS06 123 aa12.71□□□□□ -0.37
SMAD1-211ENST00000512019 KIAA0087Q14695 138 aa12.71□□□□□ -0.37
SMAD1-211ENST00000512019 CAMK2N2Q96S95 79 aa12.71□□□□□ -0.37
SMAD1-211ENST00000512019 XGP55808 180 aa12.7□□□□□ -0.38
SMAD1-211ENST00000512019 HERVK_113P61574 105 aa12.7□□□□□ -0.38
SMAD1-211ENST00000512019 SYCNQ0VAF6 134 aa12.7□□□□□ -0.38
SMAD1-211ENST00000512019 C6orf226Q5I0X4 101 aa12.7□□□□□ -0.38
SMAD1-211ENST00000512019 COX7B2Q8TF08 81 aa12.7□□□□□ -0.38
SMAD1-211ENST00000512019 CARD19Q96LW7 228 aa12.7□□□□□ -0.38
SMAD1-211ENST00000512019 EPM2AB3EWF7 344 aa12.69□□□□□ -0.38
SMAD1-211ENST00000512019 NDUFA1O15239 70 aa12.69□□□□□ -0.38
SMAD1-211ENST00000512019 SLPIP03973 132 aa12.69□□□□□ -0.38
SMAD1-211ENST00000512019 CXCL5P42830 114 aa12.69□□□□□ -0.38
SMAD1-211ENST00000512019 CKS1BP61024 79 aa12.69□□□□□ -0.38
SMAD1-211ENST00000512019 VPS13BQ7Z7G8 4022 aa12.69□□□□□ -0.38
SMAD1-211ENST00000512019 KRTAP10-1P60331 282 aa12.67□□□□□ -0.38
SMAD1-211ENST00000512019 Q6ZRU5 148 aa12.66□□□□□ -0.38
SMAD1-211ENST00000512019 C9orf163Q8N9P6 203 aa12.66□□□□□ -0.38
SMAD1-211ENST00000512019 GCSHP23434 173 aa12.65□□□□□ -0.38
SMAD1-211ENST00000512019 PKIGQ9Y2B9 76 aa12.65□□□□□ -0.38
SMAD1-211ENST00000512019 SFTA2Q6UW10 78 aa12.64□□□□□ -0.39
SMAD1-211ENST00000512019 C2orf82Q6UX34 121 aa12.64□□□□□ -0.39
SMAD1-211ENST00000512019 TRBV30A0A0K0K1B3 111 aa12.63□□□□□ -0.39
SMAD1-211ENST00000512019 INAFM2P0DMQ5 153 aa12.63□□□□□ -0.39
SMAD1-211ENST00000512019 UNQ6190/PRO20217Q6UXQ8 127 aa12.63□□□□□ -0.39
SMAD1-211ENST00000512019 LEPROTO15243 131 aa12.62□□□□□ -0.39
SMAD1-211ENST00000512019 SCGB1D1O95968 90 aa12.62□□□□□ -0.39
SMAD1-211ENST00000512019 RNF151Q2KHN1 245 aa12.62□□□□□ -0.39
SMAD1-211ENST00000512019 Q5VSD8 79 aa12.62□□□□□ -0.39
SMAD1-211ENST00000512019 PLEKHB2Q96CS7 222 aa12.62□□□□□ -0.39
SMAD1-211ENST00000512019 LINC01620Q4KN68 170 aa12.61□□□□□ -0.39
SMAD1-211ENST00000512019 C10orf25Q5T742 122 aa12.61□□□□□ -0.39
SMAD1-211ENST00000512019 ATOH7Q8N100 152 aa12.61□□□□□ -0.39
SMAD1-211ENST00000512019 C6orf48Q9UBA6 75 aa12.61□□□□□ -0.39
SMAD1-211ENST00000512019 E9PLD3 99 aa12.6□□□□□ -0.39
SMAD1-211ENST00000512019 SMR3BP02814 79 aaPredicted RBP12.59□□□□□ -0.39
SMAD1-211ENST00000512019 HAMPP81172 84 aa12.59□□□□□ -0.39
SMAD1-211ENST00000512019 STPG4Q8N801 248 aa12.59□□□□□ -0.39
SMAD1-211ENST00000512019 DNAH8Q96JB1 4490 aa12.58□□□□□ -0.4
SMAD1-211ENST00000512019 J3QQQ9 107 aa12.58□□□□□ -0.4
SMAD1-211ENST00000512019 LGALS3P17931 250 aaKnown RBP12.58□□□□□ -0.4
SMAD1-211ENST00000512019 LOC107984640A0A0U1RRK4 108 aa12.57□□□□□ -0.4
SMAD1-211ENST00000512019 ZNF625Q96I27 306 aaPredicted RBP12.57□□□□□ -0.4
SMAD1-211ENST00000512019 MYCBP2O75592 4640 aa12.56□□□□□ -0.4
SMAD1-211ENST00000512019 HSBP1L1C9JCN9 74 aa12.56□□□□□ -0.4
SMAD1-211ENST00000512019 NMUP48645 174 aa12.56□□□□□ -0.4
SMAD1-211ENST00000512019 TSPEAR-AS2P59090 65 aa12.56□□□□□ -0.4
SMAD1-211ENST00000512019 SDIM1Q6ZPB5 146 aa12.56□□□□□ -0.4
SMAD1-211ENST00000512019 NDUFA12Q9UI09 145 aa12.56□□□□□ -0.4
SMAD1-211ENST00000512019 JOSD1Q15040 202 aaPredicted RBP12.55□□□□□ -0.4
SMAD1-211ENST00000512019 MYMXA0A1B0GTQ4 84 aa12.54□□□□□ -0.4
SMAD1-211ENST00000512019 TLX1NBP0CAT3 122 aa12.54□□□□□ -0.4
SMAD1-211ENST00000512019 HERV-K104P63124 156 aa12.54□□□□□ -0.4
SMAD1-211ENST00000512019 RPL18AQ02543 176 aaKnown RBP12.54□□□□□ -0.4
SMAD1-211ENST00000512019 DMBT1Q9UGM3 2413 aaPredicted RBP12.53□□□□□ -0.4
SMAD1-211ENST00000512019 C9orf116Q5BN46 136 aaPredicted RBP12.53□□□□□ -0.4
SMAD1-211ENST00000512019 NDUFC2-KCTD14E9PQ53 114 aa12.52□□□□□ -0.41
SMAD1-211ENST00000512019 LINC00474Q9P2X8 69 aa12.52□□□□□ -0.41
SMAD1-211ENST00000512019 ANKRD39Q53RE8 183 aa12.51□□□□□ -0.41
SMAD1-211ENST00000512019 ERG28Q9UKR5 140 aa12.51□□□□□ -0.41
SMAD1-211ENST00000512019 FLG2Q5D862 2391 aaPredicted RBP12.51□□□□□ -0.41
SMAD1-211ENST00000512019 A0A096LNI7 61 aa12.5□□□□□ -0.41
SMAD1-211ENST00000512019 IGKV2D-26A0A0A0MRZ7 120 aa12.5□□□□□ -0.41
SMAD1-211ENST00000512019 PTTG1IPP53801 180 aa12.5□□□□□ -0.41
SMAD1-211ENST00000512019 GAGE2BQ13066 116 aa12.5□□□□□ -0.41
SMAD1-211ENST00000512019 COX17Q14061 63 aa12.5□□□□□ -0.41
SMAD1-211ENST00000512019 SRRM2Q9UQ35 2752 aaKnown RBP12.5□□□□□ -0.41
SMAD1-211ENST00000512019 IGKV2-24A0A0C4DH68 120 aa12.49□□□□□ -0.41
SMAD1-211ENST00000512019 LINC00587B1AMM8 73 aa12.49□□□□□ -0.41
SMAD1-211ENST00000512019 MAJINQ3KP22 176 aa12.49□□□□□ -0.41
SMAD1-211ENST00000512019 Q6ZRP5 223 aa12.49□□□□□ -0.41
SMAD1-211ENST00000512019 Q6ZSA8 131 aa12.49□□□□□ -0.41
SMAD1-211ENST00000512019 MEIG1Q5JSS6 88 aa12.48□□□□□ -0.41
SMAD1-211ENST00000512019 ZNF815PA8K554 130 aa12.47□□□□□ -0.41
SMAD1-211ENST00000512019 CHTF8P0CG12 524 aa12.47□□□□□ -0.41
SMAD1-211ENST00000512019 PFN2P35080 140 aa12.47□□□□□ -0.41
SMAD1-211ENST00000512019 GAGE2EQ4V326 116 aa12.47□□□□□ -0.41
SMAD1-211ENST00000512019 PYY3Q5JQD4 70 aa12.47□□□□□ -0.41
SMAD1-211ENST00000512019 SPACA4Q8TDM5 124 aa12.47□□□□□ -0.41
SMAD1-211ENST00000512019 FAM30AQ9NZY2 134 aa12.47□□□□□ -0.41
SMAD1-211ENST00000512019 GAGE2DQ9UEU5 116 aa12.47□□□□□ -0.41
SMAD1-211ENST00000512019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.47□□□□□ -0.41
SMAD1-211ENST00000512019 CIRBPQ14011 172 aaKnown RBP12.46□□□□□ -0.41
SMAD1-211ENST00000512019 FAM229AH3BQW9 127 aa12.45□□□□□ -0.42
SMAD1-211ENST00000512019 DPH3Q96FX2 82 aa12.45□□□□□ -0.42
SMAD1-211ENST00000512019 VAMP8Q9BV40 100 aa12.45□□□□□ -0.42
SMAD1-211ENST00000512019 LINC00158P58513 81 aa12.44□□□□□ -0.42
SMAD1-211ENST00000512019 PANO1I0J062 215 aa12.43□□□□□ -0.42
SMAD1-211ENST00000512019 TTTY13Q9BZ97 58 aa12.43□□□□□ -0.42
SMAD1-211ENST00000512019 A0A0J9YXY3 114 aa12.42□□□□□ -0.42
SMAD1-211ENST00000512019 SMIM13P0DJ93 91 aa12.42□□□□□ -0.42
SMAD1-211ENST00000512019 A0A0U1RRA0 63 aa12.41□□□□□ -0.42
SMAD1-211ENST00000512019 PCP2Q8IVA1 136 aa12.41□□□□□ -0.42
SMAD1-211ENST00000512019 PAM16Q9Y3D7 125 aa12.41□□□□□ -0.42
SMAD1-211ENST00000512019 SPATA45Q537H7 98 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms