RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 UBE2D1P51668 147 aa6.95□□□□□ -1.3
RNF4-216ENST00000511859 SMAGPQ0VAQ4 97 aa6.95□□□□□ -1.3
RNF4-216ENST00000511859 C9orf116Q5BN46 136 aaPredicted RBP6.95□□□□□ -1.3
RNF4-216ENST00000511859 FAM104AQ969W3 186 aa6.95□□□□□ -1.3
RNF4-216ENST00000511859 CHCHD1Q96BP2 118 aaKnown RBP6.95□□□□□ -1.3
RNF4-216ENST00000511859 SCGB3A1Q96QR1 104 aa6.95□□□□□ -1.3
RNF4-216ENST00000511859 TIMM21Q9BVV7 248 aa6.95□□□□□ -1.3
RNF4-216ENST00000511859 SPANXA1Q9NS26 97 aa6.95□□□□□ -1.3
RNF4-216ENST00000511859 IGLV4-3A0A075B6K6 122 aa6.94□□□□□ -1.3
RNF4-216ENST00000511859 HSBP1O75506 76 aa6.94□□□□□ -1.3
RNF4-216ENST00000511859 HBDP02042 147 aa6.94□□□□□ -1.3
RNF4-216ENST00000511859 NDUFA6P56556 154 aa6.94□□□□□ -1.3
RNF4-216ENST00000511859 TRAV13-1A0A0B4J241 112 aa6.93□□□□□ -1.3
RNF4-216ENST00000511859 IGIPA6NJ69 53 aa6.93□□□□□ -1.3
RNF4-216ENST00000511859 KRTAP1-4P0C5Y4 121 aa6.93□□□□□ -1.3
RNF4-216ENST00000511859 G0S2P27469 103 aa6.93□□□□□ -1.3
RNF4-216ENST00000511859 PHF5AQ7RTV0 110 aaKnown RBP6.93□□□□□ -1.3
RNF4-216ENST00000511859 TMEM141Q96I45 108 aa6.93□□□□□ -1.3
RNF4-216ENST00000511859 PYGO1Q9Y3Y4 419 aa6.93□□□□□ -1.3
RNF4-216ENST00000511859 CSDC2Q9Y534 153 aaKnown RBP6.93□□□□□ -1.3
RNF4-216ENST00000511859 MUC17Q685J3 4493 aa6.92□□□□□ -1.3
RNF4-216ENST00000511859 LINC00959A0A1B0GUT2 108 aa6.92□□□□□ -1.3
RNF4-216ENST00000511859 XCL1P47992 114 aa6.92□□□□□ -1.3
RNF4-216ENST00000511859 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
RNF4-216ENST00000511859 ERASQ7Z444 233 aa6.92□□□□□ -1.3
RNF4-216ENST00000511859 IGLV4-69A0A075B6H9 119 aa6.91□□□□□ -1.3
RNF4-216ENST00000511859 A0A087WZ39 114 aa6.91□□□□□ -1.3
RNF4-216ENST00000511859 IFITM10A6NMD0 228 aa6.91□□□□□ -1.3
RNF4-216ENST00000511859 CCL25O15444 150 aa6.91□□□□□ -1.3
RNF4-216ENST00000511859 FABP4P15090 132 aa6.91□□□□□ -1.3
RNF4-216ENST00000511859 Q6ZN92 141 aa6.91□□□□□ -1.3
RNF4-216ENST00000511859 LINC00173Q6ZV60 143 aa6.91□□□□□ -1.3
RNF4-216ENST00000511859 VCX2Q9H322 139 aa6.91□□□□□ -1.3
RNF4-216ENST00000511859 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.9□□□□□ -1.31
RNF4-216ENST00000511859 APOMO95445 188 aa6.9□□□□□ -1.31
RNF4-216ENST00000511859 SS18Q15532 418 aa6.9□□□□□ -1.31
RNF4-216ENST00000511859 PDZD11Q5EBL8 140 aa6.9□□□□□ -1.31
RNF4-216ENST00000511859 TEX43Q6ZNM6 134 aa6.9□□□□□ -1.31
RNF4-216ENST00000511859 TIMM17AQ99595 171 aa6.9□□□□□ -1.31
RNF4-216ENST00000511859 H0Y8G0 127 aa6.89□□□□□ -1.31
RNF4-216ENST00000511859 CD164L2Q6UWJ8 174 aa6.89□□□□□ -1.31
RNF4-216ENST00000511859 LINC01549A6NIU2 74 aa6.88□□□□□ -1.31
RNF4-216ENST00000511859 TSPAN13O95857 204 aa6.88□□□□□ -1.31
RNF4-216ENST00000511859 AMELXQ99217 191 aa6.88□□□□□ -1.31
RNF4-216ENST00000511859 C2orf88Q9BSF0 95 aa6.88□□□□□ -1.31
RNF4-216ENST00000511859 ATP5LO75964 103 aa6.87□□□□□ -1.31
RNF4-216ENST00000511859 LEPROTL1O95214 131 aa6.87□□□□□ -1.31
RNF4-216ENST00000511859 PAPPA-AS1Q5QFB9 102 aa6.87□□□□□ -1.31
RNF4-216ENST00000511859 IFI27L1Q96BM0 104 aa6.87□□□□□ -1.31
RNF4-216ENST00000511859 CAMK2N2Q96S95 79 aa6.87□□□□□ -1.31
RNF4-216ENST00000511859 NPSP0C0P6 89 aa6.86□□□□□ -1.31
RNF4-216ENST00000511859 RPL18AQ02543 176 aaKnown RBP6.86□□□□□ -1.31
RNF4-216ENST00000511859 PMVKQ15126 192 aa6.86□□□□□ -1.31
RNF4-216ENST00000511859 COA6Q5JTJ3 125 aaKnown RBP6.86□□□□□ -1.31
RNF4-216ENST00000511859 C5orf38Q86SI9 138 aa6.86□□□□□ -1.31
RNF4-216ENST00000511859 C2orf48Q96LS8 159 aa6.86□□□□□ -1.31
RNF4-216ENST00000511859 CST9LQ9H4G1 147 aa6.86□□□□□ -1.31
RNF4-216ENST00000511859 S100A6P06703 90 aa6.85□□□□□ -1.31
RNF4-216ENST00000511859 MALP21145 153 aa6.85□□□□□ -1.31
RNF4-216ENST00000511859 RNF151Q2KHN1 245 aa6.85□□□□□ -1.31
RNF4-216ENST00000511859 LINC00242Q5T6M2 205 aa6.85□□□□□ -1.31
RNF4-216ENST00000511859 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
RNF4-216ENST00000511859 CDIP1Q9H305 208 aa6.84□□□□□ -1.31
RNF4-216ENST00000511859 COX7A2LO14548 114 aa6.83□□□□□ -1.32
RNF4-216ENST00000511859 SNRPEP62304 92 aaKnown RBP6.83□□□□□ -1.32
RNF4-216ENST00000511859 GEMIN7Q9H840 131 aaKnown RBP6.83□□□□□ -1.32
RNF4-216ENST00000511859 HSPB8Q9UJY1 196 aa6.83□□□□□ -1.32
RNF4-216ENST00000511859 HIST3H2BBQ8N257 126 aa6.82□□□□□ -1.32
RNF4-216ENST00000511859 PMCHL2Q9BQD1 86 aa6.82□□□□□ -1.32
RNF4-216ENST00000511859 CHTOPQ9Y3Y2 248 aaKnown RBP6.82□□□□□ -1.32
RNF4-216ENST00000511859 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
RNF4-216ENST00000511859 LINC00469Q8N7U9 141 aa6.82□□□□□ -1.32
RNF4-216ENST00000511859 MAP1LC3CQ9BXW4 147 aa6.82□□□□□ -1.32
RNF4-216ENST00000511859 CDKN2A-AS1Q9UH64 79 aa6.82□□□□□ -1.32
RNF4-216ENST00000511859 TINCRA0A1B0GVN0 87 aa6.81□□□□□ -1.32
RNF4-216ENST00000511859 C11orf86A6NJI1 115 aa6.81□□□□□ -1.32
RNF4-216ENST00000511859 S100A2P29034 98 aa6.81□□□□□ -1.32
RNF4-216ENST00000511859 LINC01547P58512 204 aaPredicted RBP6.81□□□□□ -1.32
RNF4-216ENST00000511859 KRTDAPP60985 99 aa6.81□□□□□ -1.32
RNF4-216ENST00000511859 HERVK_113P63121 156 aa6.81□□□□□ -1.32
RNF4-216ENST00000511859 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
RNF4-216ENST00000511859 FAM19A3Q7Z5A8 133 aa6.81□□□□□ -1.32
RNF4-216ENST00000511859 MRPL35Q9NZE8 188 aaKnown RBP6.81□□□□□ -1.32
RNF4-216ENST00000511859 TRAV12-1A0A0B4J245 112 aa6.8□□□□□ -1.32
RNF4-216ENST00000511859 FAM168BA1KXE4 195 aa6.8□□□□□ -1.32
RNF4-216ENST00000511859 SPINK8P0C7L1 97 aa6.8□□□□□ -1.32
RNF4-216ENST00000511859 IGLC3P0DOY3 106 aa6.8□□□□□ -1.32
RNF4-216ENST00000511859 UBE2BP63146 152 aa6.8□□□□□ -1.32
RNF4-216ENST00000511859 SEC11AP67812 179 aa6.8□□□□□ -1.32
RNF4-216ENST00000511859 ORAOV1Q8WV07 137 aa6.8□□□□□ -1.32
RNF4-216ENST00000511859 C5orf52A6NGY3 159 aa6.79□□□□□ -1.32
RNF4-216ENST00000511859 F8WDY8 70 aa6.79□□□□□ -1.32
RNF4-216ENST00000511859 SYS1-DBNDD2H3BUS1 97 aa6.79□□□□□ -1.32
RNF4-216ENST00000511859 ZNF861PO60384 105 aa6.79□□□□□ -1.32
RNF4-216ENST00000511859 C3orf79P0CE67 100 aa6.79□□□□□ -1.32
RNF4-216ENST00000511859 TMEM170BQ5T4T1 132 aa6.79□□□□□ -1.32
RNF4-216ENST00000511859 HIST1H2BLQ99880 126 aa6.79□□□□□ -1.32
RNF4-216ENST00000511859 TOMM7Q9P0U1 55 aa6.79□□□□□ -1.32
RNF4-216ENST00000511859 F8VRH5 84 aa6.78□□□□□ -1.32
RNF4-216ENST00000511859 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms