RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 Q8IZM0 81 aa7.89□□□□□ -1.15
PTCD2-209ENST00000511752 C7orf33Q8WU49 177 aa7.89□□□□□ -1.15
PTCD2-209ENST00000511752 IGLV5-45A0A087WSX0 123 aa7.88□□□□□ -1.15
PTCD2-209ENST00000511752 TRBV30A0A0K0K1B3 111 aa7.88□□□□□ -1.15
PTCD2-209ENST00000511752 CKS1BP61024 79 aa7.88□□□□□ -1.15
PTCD2-209ENST00000511752 PDZD11Q5EBL8 140 aa7.88□□□□□ -1.15
PTCD2-209ENST00000511752 C2orf82Q6UX34 121 aa7.88□□□□□ -1.15
PTCD2-209ENST00000511752 C6orf48Q9UBA6 75 aa7.88□□□□□ -1.15
PTCD2-209ENST00000511752 BAGE3Q86Y29 109 aa7.87□□□□□ -1.15
PTCD2-209ENST00000511752 PCLOQ9Y6V0 5065 aa7.87□□□□□ -1.15
PTCD2-209ENST00000511752 SMIM1B2RUZ4 78 aa7.86□□□□□ -1.15
PTCD2-209ENST00000511752 H3BRM9 83 aa7.86□□□□□ -1.15
PTCD2-209ENST00000511752 HSBP1O75506 76 aa7.86□□□□□ -1.15
PTCD2-209ENST00000511752 TLX1NBP0CAT3 122 aa7.86□□□□□ -1.15
PTCD2-209ENST00000511752 CXCL5P42830 114 aa7.86□□□□□ -1.15
PTCD2-209ENST00000511752 KRTAP10-4P60372 401 aaPredicted RBP7.86□□□□□ -1.15
PTCD2-209ENST00000511752 COLCA2A8K830 154 aa7.85□□□□□ -1.15
PTCD2-209ENST00000511752 IGLC3P0DOY3 106 aa7.85□□□□□ -1.15
PTCD2-209ENST00000511752 SPINK8P0C7L1 97 aa7.84□□□□□ -1.15
PTCD2-209ENST00000511752 GAGE2EQ4V326 116 aa7.84□□□□□ -1.15
PTCD2-209ENST00000511752 Q6ZRP5 223 aa7.84□□□□□ -1.15
PTCD2-209ENST00000511752 COX7B2Q8TF08 81 aa7.84□□□□□ -1.15
PTCD2-209ENST00000511752 GAGE2DQ9UEU5 116 aa7.84□□□□□ -1.15
PTCD2-209ENST00000511752 NDUFC2-KCTD14E9PQ53 114 aa7.83□□□□□ -1.16
PTCD2-209ENST00000511752 F8VRH5 84 aa7.83□□□□□ -1.16
PTCD2-209ENST00000511752 C9orf116Q5BN46 136 aaPredicted RBP7.83□□□□□ -1.16
PTCD2-209ENST00000511752 ABCA13Q86UQ4 5058 aa7.83□□□□□ -1.16
PTCD2-209ENST00000511752 DNAH8Q96JB1 4490 aa7.83□□□□□ -1.16
PTCD2-209ENST00000511752 IFI27L1Q96BM0 104 aa7.82□□□□□ -1.16
PTCD2-209ENST00000511752 SRRM2Q9UQ35 2752 aaKnown RBP7.82□□□□□ -1.16
PTCD2-209ENST00000511752 VPS13BQ7Z7G8 4022 aa7.82□□□□□ -1.16
PTCD2-209ENST00000511752 A0A1W2PNN7 141 aa7.81□□□□□ -1.16
PTCD2-209ENST00000511752 SCO1O75880 301 aa7.81□□□□□ -1.16
PTCD2-209ENST00000511752 ZNF22P17026 224 aaPredicted RBP7.81□□□□□ -1.16
PTCD2-209ENST00000511752 FAM19A2Q8N3H0 131 aa7.81□□□□□ -1.16
PTCD2-209ENST00000511752 CHTOPQ9Y3Y2 248 aaKnown RBP7.81□□□□□ -1.16
PTCD2-209ENST00000511752 TRAV12-1A0A0B4J245 112 aa7.8□□□□□ -1.16
PTCD2-209ENST00000511752 C11orf86A6NJI1 115 aa7.8□□□□□ -1.16
PTCD2-209ENST00000511752 SERF1AO75920 110 aa7.8□□□□□ -1.16
PTCD2-209ENST00000511752 TMEM170BQ5T4T1 132 aa7.8□□□□□ -1.16
PTCD2-209ENST00000511752 PRR3P79522 188 aaKnown RBP7.79□□□□□ -1.16
PTCD2-209ENST00000511752 IGLV5-39A0A0G2JS06 123 aa7.78□□□□□ -1.16
PTCD2-209ENST00000511752 FAM168BA1KXE4 195 aa7.78□□□□□ -1.16
PTCD2-209ENST00000511752 LEPROTL1O95214 131 aa7.78□□□□□ -1.16
PTCD2-209ENST00000511752 HNRNPA3P51991 378 aaKnown RBP7.78□□□□□ -1.16
PTCD2-209ENST00000511752 FAM19A5Q7Z5A7 132 aaPredicted RBP7.78□□□□□ -1.16
PTCD2-209ENST00000511752 FLG2Q5D862 2391 aaPredicted RBP7.77□□□□□ -1.17
PTCD2-209ENST00000511752 KRTAP29-1A8MX34 341 aaPredicted RBP7.77□□□□□ -1.17
PTCD2-209ENST00000511752 LINC00310P59036 64 aa7.77□□□□□ -1.17
PTCD2-209ENST00000511752 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.17
PTCD2-209ENST00000511752 PHF5AQ7RTV0 110 aaKnown RBP7.77□□□□□ -1.17
PTCD2-209ENST00000511752 H0Y8G0 127 aa7.76□□□□□ -1.17
PTCD2-209ENST00000511752 OXTP01178 125 aa7.76□□□□□ -1.17
PTCD2-209ENST00000511752 HSPB8Q9UJY1 196 aa7.76□□□□□ -1.17
PTCD2-209ENST00000511752 M0QXV9 152 aa7.75□□□□□ -1.17
PTCD2-209ENST00000511752 SFTA2Q6UW10 78 aa7.75□□□□□ -1.17
PTCD2-209ENST00000511752 XAGE1AQ9HD64 81 aa7.75□□□□□ -1.17
PTCD2-209ENST00000511752 FAT1Q14517 4588 aa7.74□□□□□ -1.17
PTCD2-209ENST00000511752 NUPR1O60356 82 aa7.74□□□□□ -1.17
PTCD2-209ENST00000511752 FABP4P15090 132 aa7.74□□□□□ -1.17
PTCD2-209ENST00000511752 TMEM223A0PJW6 202 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 HIST1H2BKO60814 126 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 HIST1H2BJP06899 126 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 HIST1H2BOP23527 126 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 HIST1H2BBP33778 126 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 HIST1H2BDP58876 126 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 HIST1H2BCP62807 126 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 UBE2BP63146 152 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 ODF1Q14990 250 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 HIST2H2BEQ16778 126 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.73□□□□□ -1.17
PTCD2-209ENST00000511752 KRTAP7-1Q8IUC3 87 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 HIST1H2BHQ93079 126 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 HIST1H2BNQ99877 126 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 HIST1H2BMQ99879 126 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 PSORS1C2Q9UIG4 136 aa7.73□□□□□ -1.17
PTCD2-209ENST00000511752 SPINK6Q6UWN8 80 aa7.72□□□□□ -1.17
PTCD2-209ENST00000511752 PLNP26678 52 aa7.71□□□□□ -1.18
PTCD2-209ENST00000511752 PFN2P35080 140 aa7.71□□□□□ -1.18
PTCD2-209ENST00000511752 COX17Q14061 63 aa7.71□□□□□ -1.18
PTCD2-209ENST00000511752 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
PTCD2-209ENST00000511752 SERTAD4-AS1Q5TG53 156 aa7.71□□□□□ -1.18
PTCD2-209ENST00000511752 MAP1LC3CQ9BXW4 147 aa7.71□□□□□ -1.18
PTCD2-209ENST00000511752 ERG28Q9UKR5 140 aa7.71□□□□□ -1.18
PTCD2-209ENST00000511752 S100A1P23297 94 aa7.7□□□□□ -1.18
PTCD2-209ENST00000511752 LBHQ53QV2 105 aaPredicted RBP7.7□□□□□ -1.18
PTCD2-209ENST00000511752 ZNF625Q96I27 306 aaPredicted RBP7.7□□□□□ -1.18
PTCD2-209ENST00000511752 C22orf24Q9Y442 160 aa7.7□□□□□ -1.18
PTCD2-209ENST00000511752 TP73-AS1Q9UF72 201 aa7.69□□□□□ -1.18
PTCD2-209ENST00000511752 PLA2G2DQ9UNK4 145 aa7.69□□□□□ -1.18
PTCD2-209ENST00000511752 DPM2O94777 84 aa7.68□□□□□ -1.18
PTCD2-209ENST00000511752 SRSF9Q13242 221 aaKnown RBP eCLIP7.68□□□□□ -1.18
PTCD2-209ENST00000511752 MRPL55Q7Z7F7 128 aaKnown RBP7.68□□□□□ -1.18
PTCD2-209ENST00000511752 KRTAP11-1Q8IUC1 163 aa7.68□□□□□ -1.18
PTCD2-209ENST00000511752 HERVK_113P61574 105 aa7.67□□□□□ -1.18
PTCD2-209ENST00000511752 REG3GQ6UW15 175 aa7.67□□□□□ -1.18
PTCD2-209ENST00000511752 NKAPP1Q8N9T2 125 aa7.67□□□□□ -1.18
PTCD2-209ENST00000511752 DMBT1Q9UGM3 2413 aaPredicted RBP7.66□□□□□ -1.18
PTCD2-209ENST00000511752 IGLV5-37A0A075B6J1 123 aa7.66□□□□□ -1.18
PTCD2-209ENST00000511752 IGKCP01834 107 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms