RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 SMIM7Q9BQ49 75 aa2.95□□□□□ -1.94
PTPN13-208ENST00000511105 RPS10P5Q9NQ39 176 aa2.95□□□□□ -1.94
PTPN13-208ENST00000511105 F2Z2F3 143 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 NDUFS5O43920 106 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 CXCL1P09341 107 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 TLX1NBP0CAT3 122 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 PSMB2P49721 201 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 Q0VG73 95 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 ELOBQ15370 118 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 TMEM241Q24JQ0 296 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 KRTAP26-1Q6PEX3 210 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 SCXQ7RTU7 201 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 LINC01551Q86U37 167 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 AMN1Q8IY45 258 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 LINC00337Q8N6G1 96 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 CIRBP-AS1Q8TBR5 109 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 RMI2Q96E14 147 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 TMEM242Q9NWH2 141 aa2.94□□□□□ -1.94
PTPN13-208ENST00000511105 SDHAF1A6NFY7 115 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 HIGD1CA8MV81 97 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 A8MWL6 223 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 NDUFC2-KCTD14E9PQ53 114 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 K7EP13 123 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 BPY2O14599 106 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 IQCJQ1A5X6 159 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 AMMECR1LQ6DCA0 310 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 MRPL54Q6P161 138 aaKnown RBP2.93□□□□□ -1.94
PTPN13-208ENST00000511105 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 SMIM15Q7Z3B0 74 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 NUP35Q8NFH5 326 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 CHCHD7Q9BUK0 85 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 BIN3Q9NQY0 253 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 PRR34Q9NV39 138 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 V9GYV3 84 aa2.93□□□□□ -1.94
PTPN13-208ENST00000511105 IGKV2-24A0A0C4DH68 120 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 LOC389332A0A1B0GUA5 103 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 A0A1B0GUT8 65 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 A0A1B0GXF2 115 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 TMEM250H0YL14 139 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 I3L3M4 83 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 APCSP02743 223 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 FGF6P10767 208 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 XCL1P47992 114 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 PMVKQ15126 192 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 MIAQ16674 131 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 MRPL51Q4U2R6 128 aaKnown RBP2.92□□□□□ -1.94
PTPN13-208ENST00000511105 TEX261Q6UWH6 196 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 FAM231DQ6ZW35 169 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 TSKUQ8WUA8 353 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 BORCS7Q96B45 105 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 MRAP2Q96G30 205 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 ST20Q9HBF5 79 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 OSTCQ9NRP0 149 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
PTPN13-208ENST00000511105 LRP1Q07954 4544 aaKnown RBP2.91□□□□□ -1.94
PTPN13-208ENST00000511105 CCL25O15444 150 aa2.91□□□□□ -1.94
PTPN13-208ENST00000511105 CTAG1AP78358 180 aa2.91□□□□□ -1.94
PTPN13-208ENST00000511105 COX6A2Q02221 97 aa2.91□□□□□ -1.94
PTPN13-208ENST00000511105 PEA15Q15121 130 aa2.91□□□□□ -1.94
PTPN13-208ENST00000511105 TMEM97Q5BJF2 176 aa2.91□□□□□ -1.94
PTPN13-208ENST00000511105 SDIM1Q6ZPB5 146 aa2.91□□□□□ -1.94
PTPN13-208ENST00000511105 C5orf38Q86SI9 138 aa2.91□□□□□ -1.94
PTPN13-208ENST00000511105 SMIM12Q96EX1 92 aa2.91□□□□□ -1.94
PTPN13-208ENST00000511105 TMEM70Q9BUB7 260 aa2.91□□□□□ -1.94
PTPN13-208ENST00000511105 FAT3Q8TDW7 4589 aa2.91□□□□□ -1.94
PTPN13-208ENST00000511105 TRAV13-1A0A0B4J241 112 aa2.9□□□□□ -1.95
PTPN13-208ENST00000511105 LINC00959A0A1B0GUT2 108 aa2.9□□□□□ -1.95
PTPN13-208ENST00000511105 D6R8Y8 96 aa2.9□□□□□ -1.95
PTPN13-208ENST00000511105 FCER1GP30273 86 aa2.9□□□□□ -1.95
PTPN13-208ENST00000511105 CKS2P33552 79 aa2.9□□□□□ -1.95
PTPN13-208ENST00000511105 POLR2KP53803 58 aaKnown RBP2.9□□□□□ -1.95
PTPN13-208ENST00000511105 RPL39P62891 51 aaKnown RBP2.9□□□□□ -1.95
PTPN13-208ENST00000511105 SYCNQ0VAF6 134 aa2.9□□□□□ -1.95
PTPN13-208ENST00000511105 C9orf163Q8N9P6 203 aa2.9□□□□□ -1.95
PTPN13-208ENST00000511105 TMEM191AQ9H0A3 160 aa2.9□□□□□ -1.95
PTPN13-208ENST00000511105 C8orf17Q9NRJ1 99 aa2.9□□□□□ -1.95
PTPN13-208ENST00000511105 NAT8Q9UHE5 227 aa2.9□□□□□ -1.95
PTPN13-208ENST00000511105 FLG2Q5D862 2391 aaPredicted RBP2.9□□□□□ -1.95
PTPN13-208ENST00000511105 A0A096LNJ9 63 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 SMIM27A0A1W2PRY6 76 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 TMEM223A0PJW6 202 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 NPYP01303 97 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 ESDP10768 282 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 RPL37AP61513 92 aaKnown RBP2.89□□□□□ -1.95
PTPN13-208ENST00000511105 FAM104BQ5XKR9 115 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 Q6ZSA8 131 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 ZNF664Q8N3J9 261 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 OR5A1Q8NGJ0 315 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 BTF3L4Q96K17 158 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 CNFNQ9BYD5 112 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 CDC42SE2Q9NRR3 84 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 SPANXB1Q9NS25 103 aaPredicted RBP2.89□□□□□ -1.95
PTPN13-208ENST00000511105 NAT8BQ9UHF3 227 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 CBY1Q9Y3M2 126 aa2.89□□□□□ -1.95
PTPN13-208ENST00000511105 IGLV4-69A0A075B6H9 119 aa2.88□□□□□ -1.95
PTPN13-208ENST00000511105 IGHV3-64A0A075B6Q5 118 aa2.88□□□□□ -1.95
PTPN13-208ENST00000511105 TRBV6-5A0A0K0K1A5 114 aa2.88□□□□□ -1.95
PTPN13-208ENST00000511105 KRTAP1-4P0C5Y4 121 aa2.88□□□□□ -1.95
PTPN13-208ENST00000511105 KRTAP10-4P60372 401 aaPredicted RBP2.88□□□□□ -1.95
PTPN13-208ENST00000511105 PKIAP61925 76 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms