RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 LINC01545Q5VT33 79 aa9.44□□□□□ -0.9
COL1A1-212ENST00000510710 PET117Q6UWS5 81 aa9.44□□□□□ -0.9
COL1A1-212ENST00000510710 IGHV3OR16-9A0A0B4J2B5 98 aa9.43□□□□□ -0.9
COL1A1-212ENST00000510710 TINCRA0A1B0GVN0 87 aa9.43□□□□□ -0.9
COL1A1-212ENST00000510710 F8VRH5 84 aa9.43□□□□□ -0.9
COL1A1-212ENST00000510710 FOXI1Q12951 378 aa9.43□□□□□ -0.9
COL1A1-212ENST00000510710 MRPL35Q9NZE8 188 aaKnown RBP9.43□□□□□ -0.9
COL1A1-212ENST00000510710 PLAC8Q9NZF1 115 aa9.43□□□□□ -0.9
COL1A1-212ENST00000510710 CHTOPQ9Y3Y2 248 aaKnown RBP9.43□□□□□ -0.9
COL1A1-212ENST00000510710 IGLV5-45A0A087WSX0 123 aa9.42□□□□□ -0.9
COL1A1-212ENST00000510710 H0Y8G0 127 aa9.42□□□□□ -0.9
COL1A1-212ENST00000510710 KRTDAPP60985 99 aa9.42□□□□□ -0.9
COL1A1-212ENST00000510710 CFAP161Q6P656 301 aa9.42□□□□□ -0.9
COL1A1-212ENST00000510710 CD164L2Q6UWJ8 174 aa9.42□□□□□ -0.9
COL1A1-212ENST00000510710 OR10D4PQ8NGN7 298 aa9.42□□□□□ -0.9
COL1A1-212ENST00000510710 C11orf86A6NJI1 115 aa9.41□□□□□ -0.9
COL1A1-212ENST00000510710 XCL1P47992 114 aa9.41□□□□□ -0.9
COL1A1-212ENST00000510710 GAGE12HA6NDE8 117 aa9.4□□□□□ -0.9
COL1A1-212ENST00000510710 HERVK_113P63121 156 aa9.4□□□□□ -0.9
COL1A1-212ENST00000510710 SEC11AP67812 179 aa9.4□□□□□ -0.9
COL1A1-212ENST00000510710 MAJINQ3KP22 176 aa9.4□□□□□ -0.9
COL1A1-212ENST00000510710 LINC01600Q96MT4 127 aa9.4□□□□□ -0.9
COL1A1-212ENST00000510710 PMCHL2Q9BQD1 86 aa9.4□□□□□ -0.9
COL1A1-212ENST00000510710 ZNF22P17026 224 aaPredicted RBP9.39□□□□□ -0.91
COL1A1-212ENST00000510710 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
COL1A1-212ENST00000510710 CDKN2A-AS1Q9UH64 79 aa9.39□□□□□ -0.91
COL1A1-212ENST00000510710 A0A087WZ39 114 aa9.38□□□□□ -0.91
COL1A1-212ENST00000510710 IGKV2-24A0A0C4DH68 120 aa9.38□□□□□ -0.91
COL1A1-212ENST00000510710 HIGD2BQ4VC39 106 aa9.38□□□□□ -0.91
COL1A1-212ENST00000510710 LINC01561Q8N1V8 128 aa9.38□□□□□ -0.91
COL1A1-212ENST00000510710 DPM2O94777 84 aa9.37□□□□□ -0.91
COL1A1-212ENST00000510710 C5orf38Q86SI9 138 aa9.37□□□□□ -0.91
COL1A1-212ENST00000510710 STPG4Q8N801 248 aa9.37□□□□□ -0.91
COL1A1-212ENST00000510710 GEMIN7Q9H840 131 aaKnown RBP9.37□□□□□ -0.91
COL1A1-212ENST00000510710 LOC105371267A0A1B0GV96 52 aa9.36□□□□□ -0.91
COL1A1-212ENST00000510710 IGKCP01834 107 aa9.36□□□□□ -0.91
COL1A1-212ENST00000510710 PLNP26678 52 aa9.36□□□□□ -0.91
COL1A1-212ENST00000510710 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
COL1A1-212ENST00000510710 COX7A2LO14548 114 aa9.35□□□□□ -0.91
COL1A1-212ENST00000510710 LINC00469Q8N7U9 141 aa9.35□□□□□ -0.91
COL1A1-212ENST00000510710 TMEM223A0PJW6 202 aa9.34□□□□□ -0.91
COL1A1-212ENST00000510710 C20orf202A1L168 122 aa9.34□□□□□ -0.91
COL1A1-212ENST00000510710 SMIM1B2RUZ4 78 aa9.34□□□□□ -0.91
COL1A1-212ENST00000510710 JOSD1Q15040 202 aaPredicted RBP9.34□□□□□ -0.91
COL1A1-212ENST00000510710 IGLV5-39A0A0G2JS06 123 aa9.33□□□□□ -0.92
COL1A1-212ENST00000510710 TNXBP22105 4242 aa9.32□□□□□ -0.92
COL1A1-212ENST00000510710 A0A096LNI7 61 aa9.32□□□□□ -0.92
COL1A1-212ENST00000510710 IGHV1-58A0A0C4DH39 117 aa9.32□□□□□ -0.92
COL1A1-212ENST00000510710 PYY3Q5JQD4 70 aa9.32□□□□□ -0.92
COL1A1-212ENST00000510710 TMEM170BQ5T4T1 132 aa9.32□□□□□ -0.92
COL1A1-212ENST00000510710 REG3GQ6UW15 175 aa9.32□□□□□ -0.92
COL1A1-212ENST00000510710 SPINK6Q6UWN8 80 aa9.32□□□□□ -0.92
COL1A1-212ENST00000510710 GVQW2A0A096LPI5 108 aaPredicted RBP9.31□□□□□ -0.92
COL1A1-212ENST00000510710 H3BRM9 83 aa9.31□□□□□ -0.92
COL1A1-212ENST00000510710 SPINK8P0C7L1 97 aa9.31□□□□□ -0.92
COL1A1-212ENST00000510710 AKR1D1P51857 326 aa9.31□□□□□ -0.92
COL1A1-212ENST00000510710 KIAA0087Q14695 138 aa9.31□□□□□ -0.92
COL1A1-212ENST00000510710 LINC00474Q9P2X8 69 aa9.31□□□□□ -0.92
COL1A1-212ENST00000510710 SCGB1D1O95968 90 aa9.3□□□□□ -0.92
COL1A1-212ENST00000510710 KRTAP10-8P60410 259 aa9.3□□□□□ -0.92
COL1A1-212ENST00000510710 ATOH7Q8N100 152 aa9.3□□□□□ -0.92
COL1A1-212ENST00000510710 PKIGQ9Y2B9 76 aa9.3□□□□□ -0.92
COL1A1-212ENST00000510710 LRP2P98164 4655 aa9.29□□□□□ -0.92
COL1A1-212ENST00000510710 APOMO95445 188 aa9.29□□□□□ -0.92
COL1A1-212ENST00000510710 MALP21145 153 aa9.29□□□□□ -0.92
COL1A1-212ENST00000510710 ORAOV1Q8WV07 137 aa9.29□□□□□ -0.92
COL1A1-212ENST00000510710 Q6ZRP5 223 aa9.28□□□□□ -0.92
COL1A1-212ENST00000510710 E9PLD3 99 aa9.27□□□□□ -0.93
COL1A1-212ENST00000510710 SPAG11BQ08648 103 aa9.27□□□□□ -0.93
COL1A1-212ENST00000510710 ANKRD39Q53RE8 183 aa9.27□□□□□ -0.93
COL1A1-212ENST00000510710 Q8IZM0 81 aa9.27□□□□□ -0.93
COL1A1-212ENST00000510710 LINC00526Q96FQ7 95 aa9.27□□□□□ -0.93
COL1A1-212ENST00000510710 TSPEAR-AS2P59090 65 aa9.26□□□□□ -0.93
COL1A1-212ENST00000510710 SRSF9Q13242 221 aaKnown RBP eCLIP9.26□□□□□ -0.93
COL1A1-212ENST00000510710 COX7B2Q8TF08 81 aa9.26□□□□□ -0.93
COL1A1-212ENST00000510710 CARD19Q96LW7 228 aa9.26□□□□□ -0.93
COL1A1-212ENST00000510710 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
COL1A1-212ENST00000510710 LEPROTO15243 131 aa9.25□□□□□ -0.93
COL1A1-212ENST00000510710 HERVK_113P61574 105 aa9.25□□□□□ -0.93
COL1A1-212ENST00000510710 ZNF561-AS1K7EIQ3 104 aa9.24□□□□□ -0.93
COL1A1-212ENST00000510710 C2orf48Q96LS8 159 aa9.24□□□□□ -0.93
COL1A1-212ENST00000510710 SYCNQ0VAF6 134 aa9.23□□□□□ -0.93
COL1A1-212ENST00000510710 PLEKHB2Q96CS7 222 aa9.23□□□□□ -0.93
COL1A1-212ENST00000510710 TOMM7Q9P0U1 55 aa9.23□□□□□ -0.93
COL1A1-212ENST00000510710 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
COL1A1-212ENST00000510710 F8WDY8 70 aa9.22□□□□□ -0.93
COL1A1-212ENST00000510710 GAGE2BQ13066 116 aa9.22□□□□□ -0.93
COL1A1-212ENST00000510710 ZNF625Q96I27 306 aaPredicted RBP9.22□□□□□ -0.93
COL1A1-212ENST00000510710 J3QQQ9 107 aa9.21□□□□□ -0.94
COL1A1-212ENST00000510710 PTTG1IPP53801 180 aa9.21□□□□□ -0.94
COL1A1-212ENST00000510710 C6orf226Q5I0X4 101 aa9.21□□□□□ -0.94
COL1A1-212ENST00000510710 C10orf25Q5T742 122 aa9.21□□□□□ -0.94
COL1A1-212ENST00000510710 C2orf82Q6UX34 121 aa9.21□□□□□ -0.94
COL1A1-212ENST00000510710 PRSS2P07478 247 aa9.2□□□□□ -0.94
COL1A1-212ENST00000510710 SMIM6P0DI80 62 aa9.2□□□□□ -0.94
COL1A1-212ENST00000510710 CXCL5P42830 114 aa9.2□□□□□ -0.94
COL1A1-212ENST00000510710 UNQ6190/PRO20217Q6UXQ8 127 aa9.2□□□□□ -0.94
COL1A1-212ENST00000510710 LOC107984640A0A0U1RRK4 108 aa9.19□□□□□ -0.94
COL1A1-212ENST00000510710 NDUFA1O15239 70 aa9.19□□□□□ -0.94
COL1A1-212ENST00000510710 CAMK2N2Q96S95 79 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms