RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 C6orf48Q9UBA6 75 aa9.58□□□□□ -0.88
HTT-207ENST00000509751 F8WDY8 70 aa9.57□□□□□ -0.88
HTT-207ENST00000509751 SERF1AO75920 110 aa9.57□□□□□ -0.88
HTT-207ENST00000509751 PTTG1IPP53801 180 aa9.57□□□□□ -0.88
HTT-207ENST00000509751 C6orf226Q5I0X4 101 aa9.57□□□□□ -0.88
HTT-207ENST00000509751 IGLV5-45A0A087WSX0 123 aa9.56□□□□□ -0.88
HTT-207ENST00000509751 SMIM1B2RUZ4 78 aa9.56□□□□□ -0.88
HTT-207ENST00000509751 IGLC3P0DOY3 106 aa9.56□□□□□ -0.88
HTT-207ENST00000509751 LINC00310P59036 64 aa9.56□□□□□ -0.88
HTT-207ENST00000509751 CKS1BP61024 79 aa9.56□□□□□ -0.88
HTT-207ENST00000509751 RNF151Q2KHN1 245 aa9.56□□□□□ -0.88
HTT-207ENST00000509751 Q8IZM0 81 aa9.56□□□□□ -0.88
HTT-207ENST00000509751 PLAC8Q9NZF1 115 aa9.56□□□□□ -0.88
HTT-207ENST00000509751 LINC00474Q9P2X8 69 aa9.56□□□□□ -0.88
HTT-207ENST00000509751 SRRM2Q9UQ35 2752 aaKnown RBP9.55□□□□□ -0.88
HTT-207ENST00000509751 RPL37AP61513 92 aaKnown RBP9.55□□□□□ -0.88
HTT-207ENST00000509751 C9orf116Q5BN46 136 aaPredicted RBP9.55□□□□□ -0.88
HTT-207ENST00000509751 IFI27L1Q96BM0 104 aa9.55□□□□□ -0.88
HTT-207ENST00000509751 NUPR1O60356 82 aa9.54□□□□□ -0.88
HTT-207ENST00000509751 GAGE2EQ4V326 116 aa9.54□□□□□ -0.88
HTT-207ENST00000509751 GAGE2DQ9UEU5 116 aa9.54□□□□□ -0.88
HTT-207ENST00000509751 VPS13BQ7Z7G8 4022 aa9.54□□□□□ -0.88
HTT-207ENST00000509751 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
HTT-207ENST00000509751 H3BRM9 83 aa9.53□□□□□ -0.88
HTT-207ENST00000509751 ZNF22P17026 224 aaPredicted RBP9.53□□□□□ -0.88
HTT-207ENST00000509751 Q6ZRP5 223 aa9.53□□□□□ -0.88
HTT-207ENST00000509751 COX7B2Q8TF08 81 aa9.53□□□□□ -0.88
HTT-207ENST00000509751 CHTOPQ9Y3Y2 248 aaKnown RBP9.53□□□□□ -0.88
HTT-207ENST00000509751 FLG2Q5D862 2391 aaPredicted RBP9.53□□□□□ -0.88
HTT-207ENST00000509751 C11orf86A6NJI1 115 aa9.52□□□□□ -0.89
HTT-207ENST00000509751 H0Y8G0 127 aa9.52□□□□□ -0.89
HTT-207ENST00000509751 KRTAP10-4P60372 401 aaPredicted RBP9.52□□□□□ -0.89
HTT-207ENST00000509751 A0A1W2PNN7 141 aa9.51□□□□□ -0.89
HTT-207ENST00000509751 S100A1P23297 94 aa9.51□□□□□ -0.89
HTT-207ENST00000509751 TMEM170BQ5T4T1 132 aa9.51□□□□□ -0.89
HTT-207ENST00000509751 C7orf33Q8WU49 177 aa9.51□□□□□ -0.89
HTT-207ENST00000509751 HIST1H2BKO60814 126 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 LEPROTL1O95214 131 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 HIST1H2BJP06899 126 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 FABP4P15090 132 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 HIST1H2BOP23527 126 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 HIST1H2BBP33778 126 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 HIST1H2BDP58876 126 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 HIST1H2BCP62807 126 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 HIST2H2BEQ16778 126 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.5□□□□□ -0.89
HTT-207ENST00000509751 HIST1H2BHQ93079 126 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 HIST1H2BNQ99877 126 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 HIST1H2BMQ99879 126 aa9.5□□□□□ -0.89
HTT-207ENST00000509751 NDUFC2-KCTD14E9PQ53 114 aa9.49□□□□□ -0.89
HTT-207ENST00000509751 F8VRH5 84 aa9.49□□□□□ -0.89
HTT-207ENST00000509751 TLX1NBP0CAT3 122 aa9.49□□□□□ -0.89
HTT-207ENST00000509751 CXCL5P42830 114 aa9.49□□□□□ -0.89
HTT-207ENST00000509751 TRAV12-1A0A0B4J245 112 aa9.48□□□□□ -0.89
HTT-207ENST00000509751 FAM168BA1KXE4 195 aa9.48□□□□□ -0.89
HTT-207ENST00000509751 ATP6V1G1O75348 118 aa9.48□□□□□ -0.89
HTT-207ENST00000509751 IGLV5-39A0A0G2JS06 123 aa9.47□□□□□ -0.89
HTT-207ENST00000509751 FAM19A5Q7Z5A7 132 aaPredicted RBP9.47□□□□□ -0.89
HTT-207ENST00000509751 HNRNPA3P51991 378 aaKnown RBP9.46□□□□□ -0.9
HTT-207ENST00000509751 ODF1Q14990 250 aa9.45□□□□□ -0.9
HTT-207ENST00000509751 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
HTT-207ENST00000509751 PHF5AQ7RTV0 110 aaKnown RBP9.45□□□□□ -0.9
HTT-207ENST00000509751 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
HTT-207ENST00000509751 HSPB8Q9UJY1 196 aa9.45□□□□□ -0.9
HTT-207ENST00000509751 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
HTT-207ENST00000509751 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
HTT-207ENST00000509751 TMEM223A0PJW6 202 aa9.42□□□□□ -0.9
HTT-207ENST00000509751 ZNF625Q96I27 306 aaPredicted RBP9.42□□□□□ -0.9
HTT-207ENST00000509751 PFN2P35080 140 aa9.41□□□□□ -0.9
HTT-207ENST00000509751 KRTAP7-1Q8IUC3 87 aa9.41□□□□□ -0.9
HTT-207ENST00000509751 M0QXV9 152 aa9.4□□□□□ -0.9
HTT-207ENST00000509751 MYCBP2O75592 4640 aa9.4□□□□□ -0.91
HTT-207ENST00000509751 SERTAD4-AS1Q5TG53 156 aa9.39□□□□□ -0.91
HTT-207ENST00000509751 MAP1LC3CQ9BXW4 147 aa9.39□□□□□ -0.91
HTT-207ENST00000509751 LCE2BO14633 110 aa9.38□□□□□ -0.91
HTT-207ENST00000509751 DPM2O94777 84 aa9.38□□□□□ -0.91
HTT-207ENST00000509751 ERG28Q9UKR5 140 aa9.38□□□□□ -0.91
HTT-207ENST00000509751 PLNP26678 52 aa9.37□□□□□ -0.91
HTT-207ENST00000509751 UBE2BP63146 152 aa9.37□□□□□ -0.91
HTT-207ENST00000509751 KRTAP11-1Q8IUC1 163 aa9.37□□□□□ -0.91
HTT-207ENST00000509751 PSORS1C2Q9UIG4 136 aa9.37□□□□□ -0.91
HTT-207ENST00000509751 DMBT1Q9UGM3 2413 aaPredicted RBP9.37□□□□□ -0.91
HTT-207ENST00000509751 IGKCP01834 107 aa9.36□□□□□ -0.91
HTT-207ENST00000509751 A0A0U1RRA0 63 aa9.35□□□□□ -0.91
HTT-207ENST00000509751 SYS1-DBNDD2H3BUS1 97 aa9.34□□□□□ -0.91
HTT-207ENST00000509751 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.91
HTT-207ENST00000509751 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
HTT-207ENST00000509751 COA6Q5JTJ3 125 aaKnown RBP9.34□□□□□ -0.91
HTT-207ENST00000509751 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
HTT-207ENST00000509751 LINC00158P58513 81 aa9.33□□□□□ -0.92
HTT-207ENST00000509751 SFTA2Q6UW10 78 aa9.33□□□□□ -0.92
HTT-207ENST00000509751 NDUFA12Q9UI09 145 aa9.33□□□□□ -0.92
HTT-207ENST00000509751 HERVK_113P61574 105 aa9.32□□□□□ -0.92
HTT-207ENST00000509751 MEIG1Q5JSS6 88 aa9.32□□□□□ -0.92
HTT-207ENST00000509751 SND1-IT1Q9HBX3 110 aa9.32□□□□□ -0.92
HTT-207ENST00000509751 PKHD1L1Q86WI1 4243 aa9.32□□□□□ -0.92
HTT-207ENST00000509751 GAGE10A6NGK3 116 aa9.31□□□□□ -0.92
HTT-207ENST00000509751 KRTAP29-1A8MX34 341 aaPredicted RBP9.31□□□□□ -0.92
HTT-207ENST00000509751 LEPROTO15243 131 aa9.31□□□□□ -0.92
HTT-207ENST00000509751 C3orf79P0CE67 100 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms