RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 S100A6P06703 90 aa3.62□□□□□ -1.83
HMGB1P44-201ENST00000508597 UBE2D1P51668 147 aa3.62□□□□□ -1.83
HMGB1P44-201ENST00000508597 HERVK_113P63121 156 aa3.62□□□□□ -1.83
HMGB1P44-201ENST00000508597 CHCHD10Q8WYQ3 142 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P44-201ENST00000508597 FAM104AQ969W3 186 aa3.62□□□□□ -1.83
HMGB1P44-201ENST00000508597 IFI27L1Q96BM0 104 aa3.62□□□□□ -1.83
HMGB1P44-201ENST00000508597 DNAH10Q8IVF4 4471 aa3.62□□□□□ -1.83
HMGB1P44-201ENST00000508597 DNAH2Q9P225 4427 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 A0A087WTM6 91 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 IGHV1-58A0A0C4DH39 117 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 IGKV3OR2-268A0A0C4DH90 116 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 TINCRA0A1B0GVN0 87 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 LRCOL1A6NCL2 159 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 F8WDY8 70 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 APOMO95445 188 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 AKR1D1P51857 326 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 NDUFA6P56556 154 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 KRTAP26-1Q6PEX3 210 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 CLPSL2Q6UWE3 100 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 LINC00173Q6ZV60 143 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 BAALCQ8WXS3 180 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 OPRPNQ99935 248 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 CST9LQ9H4G1 147 aa3.61□□□□□ -1.83
HMGB1P44-201ENST00000508597 IGLV10-54A0A075B6I4 117 aa3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 A0A087WZ39 114 aa3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 IGHV3OR16-9A0A0B4J2B5 98 aa3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 COX7A2LO14548 114 aa3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 XCL1P47992 114 aa3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 SRSF9Q13242 221 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 PMCHL1Q16048 86 aa3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 RNASE13Q5GAN3 156 aaKnown RBP3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 LINC00242Q5T6M2 205 aa3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 SPATA12Q7Z6I5 190 aa3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 FAM19A2Q8N3H0 131 aa3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 C12orf57Q99622 126 aa3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 MAP1LC3CQ9BXW4 147 aa3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 GEMIN7Q9H840 131 aaKnown RBP3.6□□□□□ -1.83
HMGB1P44-201ENST00000508597 PCP4L1A6NKN8 68 aa3.59□□□□□ -1.83
HMGB1P44-201ENST00000508597 F8VRH5 84 aa3.59□□□□□ -1.83
HMGB1P44-201ENST00000508597 H3BRM9 83 aa3.59□□□□□ -1.83
HMGB1P44-201ENST00000508597 NUPR1O60356 82 aa3.59□□□□□ -1.83
HMGB1P44-201ENST00000508597 IGLC3P0DOY3 106 aa3.59□□□□□ -1.83
HMGB1P44-201ENST00000508597 Q8N814 137 aa3.59□□□□□ -1.83
HMGB1P44-201ENST00000508597 OR10D4PQ8NGN7 298 aa3.59□□□□□ -1.83
HMGB1P44-201ENST00000508597 PKIGQ9Y2B9 76 aa3.59□□□□□ -1.83
HMGB1P44-201ENST00000508597 CHTOPQ9Y3Y2 248 aaKnown RBP3.59□□□□□ -1.83
HMGB1P44-201ENST00000508597 IGHV3-64A0A075B6Q5 118 aa3.58□□□□□ -1.84
HMGB1P44-201ENST00000508597 GVQW2A0A096LPI5 108 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P44-201ENST00000508597 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P44-201ENST00000508597 A0A0J9YXV3 536 aa3.58□□□□□ -1.84
HMGB1P44-201ENST00000508597 FABP4P15090 132 aa3.58□□□□□ -1.84
HMGB1P44-201ENST00000508597 PLNP26678 52 aa3.58□□□□□ -1.84
HMGB1P44-201ENST00000508597 S100A2P29034 98 aa3.58□□□□□ -1.84
HMGB1P44-201ENST00000508597 C2orf48Q96LS8 159 aa3.58□□□□□ -1.84
HMGB1P44-201ENST00000508597 FAT2Q9NYQ8 4349 aa3.58□□□□□ -1.84
HMGB1P44-201ENST00000508597 IGLV4-69A0A075B6H9 119 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 A0A1B0GVY2 172 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 C20orf202A1L168 122 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 SYS1-DBNDD2H3BUS1 97 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 CFC1BP0CG36 223 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 CFC1P0CG37 223 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 CXCL5P42830 114 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 CNBPP62633 177 aaKnown RBP3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 COX6A2Q02221 97 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 ZC2HC1BQ5TFG8 222 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 SFTA2Q6UW10 78 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 C5orf38Q86SI9 138 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 Q8IZM0 81 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 HIST3H2BBQ8N257 126 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 LINC00469Q8N7U9 141 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 C15orf56Q8N910 161 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 CHAC1Q9BUX1 264 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 CDKN2A-AS1Q9UH64 79 aa3.57□□□□□ -1.84
HMGB1P44-201ENST00000508597 C11orf86A6NJI1 115 aa3.56□□□□□ -1.84
HMGB1P44-201ENST00000508597 DPM2O94777 84 aa3.56□□□□□ -1.84
HMGB1P44-201ENST00000508597 ZNF22P17026 224 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P44-201ENST00000508597 WFDC2Q14508 124 aa3.56□□□□□ -1.84
HMGB1P44-201ENST00000508597 LINC01545Q5VT33 79 aa3.56□□□□□ -1.84
HMGB1P44-201ENST00000508597 ORAOV1Q8WV07 137 aa3.56□□□□□ -1.84
HMGB1P44-201ENST00000508597 MRPL35Q9NZE8 188 aaKnown RBP3.56□□□□□ -1.84
HMGB1P44-201ENST00000508597 TMEM223A0PJW6 202 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 H0Y8G0 127 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 LECT2O14960 151 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 NDUFA1O15239 70 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 IGKCP01834 107 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 C3orf79P0CE67 100 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 MT3P25713 68 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 HERVK_113P61574 105 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 SPAG11BQ08648 103 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 SYCNQ0VAF6 134 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 KIAA0087Q14695 138 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 C6orf226Q5I0X4 101 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 TMEM170BQ5T4T1 132 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 C9orf163Q8N9P6 203 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 LITAFQ99732 161 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 HIST1H2BLQ99880 126 aa3.55□□□□□ -1.84
HMGB1P44-201ENST00000508597 PKD1P98161 4303 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms