RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 LINC00469Q8N7U9 141 aa7.78□□□□□ -1.16
PTPN20-218ENST00000508357 GEMIN7Q9H840 131 aaKnown RBP7.78□□□□□ -1.16
PTPN20-218ENST00000508357 F8WDY8 70 aa7.77□□□□□ -1.17
PTPN20-218ENST00000508357 INAFM2P0DMQ5 153 aa7.77□□□□□ -1.17
PTPN20-218ENST00000508357 IGLC3P0DOY3 106 aa7.77□□□□□ -1.17
PTPN20-218ENST00000508357 SEC11AP67812 179 aa7.77□□□□□ -1.17
PTPN20-218ENST00000508357 STPG4Q8N801 248 aa7.77□□□□□ -1.17
PTPN20-218ENST00000508357 HERC1Q15751 4861 aa7.76□□□□□ -1.17
PTPN20-218ENST00000508357 NUPR1O60356 82 aa7.76□□□□□ -1.17
PTPN20-218ENST00000508357 SERF1AO75920 110 aa7.76□□□□□ -1.17
PTPN20-218ENST00000508357 ZNF22P17026 224 aaPredicted RBP7.76□□□□□ -1.17
PTPN20-218ENST00000508357 HNRNPA3P51991 378 aaKnown RBP7.76□□□□□ -1.17
PTPN20-218ENST00000508357 RPL18AQ02543 176 aaKnown RBP7.76□□□□□ -1.17
PTPN20-218ENST00000508357 GAGE2BQ13066 116 aa7.76□□□□□ -1.17
PTPN20-218ENST00000508357 Q6ZRP5 223 aa7.76□□□□□ -1.17
PTPN20-218ENST00000508357 Q8IZM0 81 aa7.76□□□□□ -1.17
PTPN20-218ENST00000508357 FAM19A2Q8N3H0 131 aa7.76□□□□□ -1.17
PTPN20-218ENST00000508357 TOMM7Q9P0U1 55 aa7.76□□□□□ -1.17
PTPN20-218ENST00000508357 A0A1W2PNN7 141 aa7.75□□□□□ -1.17
PTPN20-218ENST00000508357 C11orf86A6NJI1 115 aa7.75□□□□□ -1.17
PTPN20-218ENST00000508357 ATP5LO75964 103 aa7.75□□□□□ -1.17
PTPN20-218ENST00000508357 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
PTPN20-218ENST00000508357 SPINK8P0C7L1 97 aa7.75□□□□□ -1.17
PTPN20-218ENST00000508357 TLX1NBP0CAT3 122 aa7.75□□□□□ -1.17
PTPN20-218ENST00000508357 RPL37AP61513 92 aaKnown RBP7.75□□□□□ -1.17
PTPN20-218ENST00000508357 C9orf116Q5BN46 136 aaPredicted RBP7.75□□□□□ -1.17
PTPN20-218ENST00000508357 BAGE3Q86Y29 109 aa7.75□□□□□ -1.17
PTPN20-218ENST00000508357 PKIGQ9Y2B9 76 aa7.75□□□□□ -1.17
PTPN20-218ENST00000508357 NDUFA6P56556 154 aa7.74□□□□□ -1.17
PTPN20-218ENST00000508357 PACRGQ96M98 296 aaPredicted RBP7.74□□□□□ -1.17
PTPN20-218ENST00000508357 IGLV5-39A0A0G2JS06 123 aa7.73□□□□□ -1.17
PTPN20-218ENST00000508357 TRBV30A0A0K0K1B3 111 aa7.73□□□□□ -1.17
PTPN20-218ENST00000508357 HSBP1O75506 76 aa7.73□□□□□ -1.17
PTPN20-218ENST00000508357 LINC00474Q9P2X8 69 aa7.73□□□□□ -1.17
PTPN20-218ENST00000508357 FAM168BA1KXE4 195 aa7.72□□□□□ -1.17
PTPN20-218ENST00000508357 PRSS2P07478 247 aa7.72□□□□□ -1.17
PTPN20-218ENST00000508357 KRTAP7-1Q8IUC3 87 aa7.72□□□□□ -1.17
PTPN20-218ENST00000508357 COX7B2Q8TF08 81 aa7.72□□□□□ -1.17
PTPN20-218ENST00000508357 IFI27L1Q96BM0 104 aa7.72□□□□□ -1.17
PTPN20-218ENST00000508357 DPH3Q96FX2 82 aa7.72□□□□□ -1.17
PTPN20-218ENST00000508357 TRAV12-1A0A0B4J245 112 aa7.71□□□□□ -1.18
PTPN20-218ENST00000508357 HIST1H2BKO60814 126 aa7.71□□□□□ -1.18
PTPN20-218ENST00000508357 HIST1H2BJP06899 126 aa7.71□□□□□ -1.18
PTPN20-218ENST00000508357 HIST1H2BOP23527 126 aa7.71□□□□□ -1.18
PTPN20-218ENST00000508357 HIST1H2BBP33778 126 aa7.71□□□□□ -1.18
PTPN20-218ENST00000508357 HIST1H2BDP58876 126 aa7.71□□□□□ -1.18
PTPN20-218ENST00000508357 HIST1H2BCP62807 126 aa7.71□□□□□ -1.18
PTPN20-218ENST00000508357 HIST2H2BEQ16778 126 aa7.71□□□□□ -1.18
PTPN20-218ENST00000508357 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.71□□□□□ -1.18
PTPN20-218ENST00000508357 HIST1H2BHQ93079 126 aa7.71□□□□□ -1.18
PTPN20-218ENST00000508357 HIST1H2BNQ99877 126 aa7.71□□□□□ -1.18
PTPN20-218ENST00000508357 HIST1H2BMQ99879 126 aa7.71□□□□□ -1.18
PTPN20-218ENST00000508357 NDUFC2-KCTD14E9PQ53 114 aa7.7□□□□□ -1.18
PTPN20-218ENST00000508357 F8VRH5 84 aa7.7□□□□□ -1.18
PTPN20-218ENST00000508357 CKS1BP61024 79 aa7.7□□□□□ -1.18
PTPN20-218ENST00000508357 GAGE2EQ4V326 116 aa7.7□□□□□ -1.18
PTPN20-218ENST00000508357 C6orf226Q5I0X4 101 aa7.7□□□□□ -1.18
PTPN20-218ENST00000508357 C9orf129Q5T035 196 aaKnown RBP7.7□□□□□ -1.18
PTPN20-218ENST00000508357 GAGE2DQ9UEU5 116 aa7.7□□□□□ -1.18
PTPN20-218ENST00000508357 CHTOPQ9Y3Y2 248 aaKnown RBP7.7□□□□□ -1.18
PTPN20-218ENST00000508357 H3BRM9 83 aa7.69□□□□□ -1.18
PTPN20-218ENST00000508357 CXCL5P42830 114 aa7.69□□□□□ -1.18
PTPN20-218ENST00000508357 PRR3P79522 188 aaKnown RBP7.69□□□□□ -1.18
PTPN20-218ENST00000508357 ODF1Q14990 250 aa7.69□□□□□ -1.18
PTPN20-218ENST00000508357 DMBT1Q9UGM3 2413 aaPredicted RBP7.69□□□□□ -1.18
PTPN20-218ENST00000508357 ATP6V1G1O75348 118 aa7.68□□□□□ -1.18
PTPN20-218ENST00000508357 PHF5AQ7RTV0 110 aaKnown RBP7.68□□□□□ -1.18
PTPN20-218ENST00000508357 KRTAP11-1Q8IUC1 163 aa7.68□□□□□ -1.18
PTPN20-218ENST00000508357 TNXBP22105 4242 aa7.68□□□□□ -1.18
PTPN20-218ENST00000508357 LOC100996750A0A140TA64 210 aa7.67□□□□□ -1.18
PTPN20-218ENST00000508357 LEPROTL1O95214 131 aa7.67□□□□□ -1.18
PTPN20-218ENST00000508357 TMEM170BQ5T4T1 132 aa7.67□□□□□ -1.18
PTPN20-218ENST00000508357 FAM19A5Q7Z5A7 132 aaPredicted RBP7.67□□□□□ -1.18
PTPN20-218ENST00000508357 C7orf33Q8WU49 177 aa7.67□□□□□ -1.18
PTPN20-218ENST00000508357 KRTAP4-6Q9BYQ5 205 aa7.67□□□□□ -1.18
PTPN20-218ENST00000508357 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
PTPN20-218ENST00000508357 H0Y8G0 127 aa7.66□□□□□ -1.18
PTPN20-218ENST00000508357 SERTAD4-AS1Q5TG53 156 aa7.66□□□□□ -1.18
PTPN20-218ENST00000508357 FABP4P15090 132 aa7.65□□□□□ -1.18
PTPN20-218ENST00000508357 XAGE1AQ9HD64 81 aa7.65□□□□□ -1.18
PTPN20-218ENST00000508357 ZNF625Q96I27 306 aaPredicted RBP7.64□□□□□ -1.19
PTPN20-218ENST00000508357 M0QXV9 152 aa7.63□□□□□ -1.19
PTPN20-218ENST00000508357 PMCHL2Q9BQD1 86 aa7.63□□□□□ -1.19
PTPN20-218ENST00000508357 HSPB8Q9UJY1 196 aa7.63□□□□□ -1.19
PTPN20-218ENST00000508357 TSPEAR-AS2P59090 65 aa7.62□□□□□ -1.19
PTPN20-218ENST00000508357 COA6Q5JTJ3 125 aaKnown RBP7.62□□□□□ -1.19
PTPN20-218ENST00000508357 PSORS1C2Q9UIG4 136 aa7.62□□□□□ -1.19
PTPN20-218ENST00000508357 KRTAP29-1A8MX34 341 aaPredicted RBP7.61□□□□□ -1.19
PTPN20-218ENST00000508357 S100A1P23297 94 aa7.61□□□□□ -1.19
PTPN20-218ENST00000508357 ERG28Q9UKR5 140 aa7.6□□□□□ -1.19
PTPN20-218ENST00000508357 PFN2P35080 140 aa7.59□□□□□ -1.19
PTPN20-218ENST00000508357 Q8NDZ9 215 aa7.59□□□□□ -1.19
PTPN20-218ENST00000508357 DPM2O94777 84 aa7.58□□□□□ -1.2
PTPN20-218ENST00000508357 PLNP26678 52 aa7.58□□□□□ -1.2
PTPN20-218ENST00000508357 SRSF9Q13242 221 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTPN20-218ENST00000508357 C22orf24Q9Y442 160 aa7.58□□□□□ -1.2
PTPN20-218ENST00000508357 HMCN2Q8NDA2 5059 aa7.58□□□□□ -1.2
PTPN20-218ENST00000508357 SYS1-DBNDD2H3BUS1 97 aa7.57□□□□□ -1.2
PTPN20-218ENST00000508357 IGKCP01834 107 aa7.57□□□□□ -1.2
PTPN20-218ENST00000508357 MAP1LC3CQ9BXW4 147 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms