RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 RPL37AP61513 92 aaKnown RBP2.14□□□□□ -2.07
NEDD4-208ENST00000508342 EGFEM1PQ0D2K5 195 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 C1orf195Q5TG92 126 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 Q6ZPA2 131 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 PPDPFLQ8WWR9 84 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 DMDP11532 3685 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 WDFY3Q8IZQ1 3526 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 TRBV6-4A0A1B0GX49 114 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 K7EN84 100 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 TP53TG3Q9ULZ0 132 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 E7EUB6 86 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 H7C423 109 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 PRR4Q16378 134 aa2.14□□□□□ -2.07
NEDD4-208ENST00000508342 HIST1H2BKO60814 126 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 HIST1H2BJP06899 126 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 HIST1H2BOP23527 126 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 HIST1H2BBP33778 126 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 HIST1H2BDP58876 126 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 HIST1H2BCP62807 126 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 HIST2H2BEQ16778 126 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.13□□□□□ -2.07
NEDD4-208ENST00000508342 HIST1H2BHQ93079 126 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 C11orf52Q96A22 123 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 HIST1H2BNQ99877 126 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 HIST1H2BMQ99879 126 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 LIMD2Q9BT23 127 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 CELA1Q9UNI1 258 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 C12orf74Q32Q52 190 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 WFDC10BQ8IUB3 73 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 C2orf48Q96LS8 159 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 DKK2Q9UBU2 259 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 PLA2G2DQ9UNK4 145 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 C3orf79P0CE67 100 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 KIAA0087Q14695 138 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 C10orf25Q5T742 122 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 DCANP1Q8TF63 244 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 ODF3Q96PU9 254 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 TEP1Q99973 2627 aaKnown RBP2.13□□□□□ -2.07
NEDD4-208ENST00000508342 RPL37AP8A6NKH3 93 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 LST1O00453 97 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 LGALS9CQ6DKI2 356 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 DAND5Q8N907 189 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 Q8N9L7 120 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 RNF185Q96GF1 192 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 LAMA3Q16787 3333 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 RTL8CO15255 209 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 CFC1BP0CG36 223 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 CFC1P0CG37 223 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 DHRS4-AS1Q9P1J3 65 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 REV3LO60673 3130 aa2.13□□□□□ -2.07
NEDD4-208ENST00000508342 IGLV5-45A0A087WSX0 123 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 NBPF19A0A087WUL8 3843 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 RPL39P62891 51 aaKnown RBP2.12□□□□□ -2.07
NEDD4-208ENST00000508342 SERP2Q8N6R1 65 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 CYYR1Q96J86 154 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 AKAP9Q99996 3911 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 PRAC2D3DTV9 90 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 TM2D3Q9BRN9 247 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 LINC00467Q9BRT7 94 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 ATOX1O00244 68 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 ATP5EP2Q5VTU8 51 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 Q6ZUT4 128 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 NTN5Q8WTR8 489 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-208ENST00000508342 NBDYA0A0U1RRE5 68 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 MPLKIPQ8TAP9 179 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 TRBV10-3A0A0K0K1G6 114 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 C18orf32Q8TCD1 76 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 ZNF580Q9UK33 172 aa2.12□□□□□ -2.07
NEDD4-208ENST00000508342 M0R378 163 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 CRIP3Q6Q6R5 217 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 CHCHD7Q9BUK0 85 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 UNC79Q9P2D8 2635 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 PHF5AQ7RTV0 110 aaKnown RBP2.11□□□□□ -2.07
NEDD4-208ENST00000508342 COX6A2Q02221 97 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 PMAIP1Q13794 54 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 C20orf203Q8NBC4 194 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 LINC00476Q8WZB0 136 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 C19orf73Q9NVV2 129 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 LCE6AA0A183 80 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 CCKP06307 115 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 PIK3CD-AS1Q5SR53 167 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 CEND1Q8N111 149 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 PRRC2CQ9Y520 2896 aaKnown RBP2.11□□□□□ -2.07
NEDD4-208ENST00000508342 TRAV23DV6A0A075B6W5 121 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 CXCL6P80162 114 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 TEN1Q86WV5 123 aa2.11□□□□□ -2.07
NEDD4-208ENST00000508342 PRUNE2Q8WUY3 3088 aa2.1□□□□□ -2.07
NEDD4-208ENST00000508342 IGKV3D-7A0A0C4DH55 119 aa2.1□□□□□ -2.07
NEDD4-208ENST00000508342 IBA57-AS1B1ANH7 110 aa2.1□□□□□ -2.07
NEDD4-208ENST00000508342 NDUFV3P56181 108 aaKnown RBP2.1□□□□□ -2.07
NEDD4-208ENST00000508342 CENPEQ02224 2701 aa2.1□□□□□ -2.07
NEDD4-208ENST00000508342 PRM2P04554 102 aa2.1□□□□□ -2.07
NEDD4-208ENST00000508342 SPACA4Q8TDM5 124 aa2.1□□□□□ -2.07
NEDD4-208ENST00000508342 CFAP126Q5VTH2 177 aa2.1□□□□□ -2.07
NEDD4-208ENST00000508342 TRBV27A0A0K0K1C4 114 aa2.1□□□□□ -2.07
NEDD4-208ENST00000508342 TYMSOSQ8TAI1 123 aa2.1□□□□□ -2.07
NEDD4-208ENST00000508342 ODF3L2Q3SX64 289 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 ETDBQ3ZM63 59 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 C6orf99Q4VX62 202 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 LINC00242Q5T6M2 205 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms