RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 BSPH1Q075Z2 132 aa7.3□□□□□ -1.24
PDLIM5-210ENST00000508216 S4R3C0 116 aa7.3□□□□□ -1.24
PDLIM5-210ENST00000508216 MAP1BP46821 2468 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-210ENST00000508216 IGHV3-72A0A0B4J1Y9 119 aa7.29□□□□□ -1.24
PDLIM5-210ENST00000508216 LINC00467Q9BRT7 94 aa7.29□□□□□ -1.24
PDLIM5-210ENST00000508216 KCNQ1DNQ9H478 68 aa7.29□□□□□ -1.24
PDLIM5-210ENST00000508216 DMXL1Q9Y485 3027 aa7.29□□□□□ -1.24
PDLIM5-210ENST00000508216 ANKRD11Q6UB99 2663 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-210ENST00000508216 TRIOO75962 3097 aa7.29□□□□□ -1.24
PDLIM5-210ENST00000508216 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-210ENST00000508216 IGHV4-59P01825 116 aa7.28□□□□□ -1.24
PDLIM5-210ENST00000508216 LINC01006Q8NI28 216 aa7.28□□□□□ -1.24
PDLIM5-210ENST00000508216 COX7B2Q8TF08 81 aa7.28□□□□□ -1.24
PDLIM5-210ENST00000508216 RIF1Q5UIP0 2472 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-210ENST00000508216 USP24Q9UPU5 2620 aa7.28□□□□□ -1.24
PDLIM5-210ENST00000508216 CACNA1HO95180 2353 aa7.28□□□□□ -1.24
PDLIM5-210ENST00000508216 GPR179Q6PRD1 2367 aa7.28□□□□□ -1.24
PDLIM5-210ENST00000508216 PINLYPA6NC86 204 aa7.28□□□□□ -1.24
PDLIM5-210ENST00000508216 LMO4P61968 165 aa7.28□□□□□ -1.24
PDLIM5-210ENST00000508216 LINC00612Q8N6U2 182 aa7.28□□□□□ -1.24
PDLIM5-210ENST00000508216 UNC79Q9P2D8 2635 aa7.27□□□□□ -1.24
PDLIM5-210ENST00000508216 FASNP49327 2511 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-210ENST00000508216 DMDP11532 3685 aa7.27□□□□□ -1.25
PDLIM5-210ENST00000508216 NDUFA4O00483 81 aa7.27□□□□□ -1.25
PDLIM5-210ENST00000508216 ARRDC1-AS1Q9H2J1 176 aa7.27□□□□□ -1.25
PDLIM5-210ENST00000508216 GVINP1Q7Z2Y8 2422 aa7.27□□□□□ -1.25
PDLIM5-210ENST00000508216 IGHV4-30-2A0A087WSY4 118 aa7.26□□□□□ -1.25
PDLIM5-210ENST00000508216 IGHV3-35A0A0C4DH35 117 aa7.26□□□□□ -1.25
PDLIM5-210ENST00000508216 MRPS21P82921 87 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-210ENST00000508216 KAAG1Q9UBP8 84 aa7.26□□□□□ -1.25
PDLIM5-210ENST00000508216 FAM208BQ5VWN6 2430 aa7.26□□□□□ -1.25
PDLIM5-210ENST00000508216 PLA2G2AP14555 144 aa7.25□□□□□ -1.25
PDLIM5-210ENST00000508216 LINC00158P58513 81 aa7.25□□□□□ -1.25
PDLIM5-210ENST00000508216 ZNF292O60281 2723 aa7.25□□□□□ -1.25
PDLIM5-210ENST00000508216 IGHV1-46P01743 117 aa7.25□□□□□ -1.25
PDLIM5-210ENST00000508216 IGHV3-23P01764 117 aa7.25□□□□□ -1.25
PDLIM5-210ENST00000508216 SMIM29Q86T20 159 aa7.24□□□□□ -1.25
PDLIM5-210ENST00000508216 PRAC1Q96KF2 57 aa7.24□□□□□ -1.25
PDLIM5-210ENST00000508216 RETNLBQ9BQ08 111 aa7.24□□□□□ -1.25
PDLIM5-210ENST00000508216 ZNF706Q9Y5V0 76 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-210ENST00000508216 VPS13AQ96RL7 3174 aa7.23□□□□□ -1.25
PDLIM5-210ENST00000508216 IGHV3-66A0A0C4DH42 116 aa7.23□□□□□ -1.25
PDLIM5-210ENST00000508216 RTL8CO15255 209 aa7.23□□□□□ -1.25
PDLIM5-210ENST00000508216 IGLV1-51P01701 117 aa7.23□□□□□ -1.25
PDLIM5-210ENST00000508216 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-210ENST00000508216 ATP6V0E1O15342 81 aa7.22□□□□□ -1.25
PDLIM5-210ENST00000508216 DEFB133Q30KQ1 61 aa7.22□□□□□ -1.25
PDLIM5-210ENST00000508216 DEFB108BQ8NET1 73 aa7.22□□□□□ -1.25
PDLIM5-210ENST00000508216 IGHV4-30-4P0DP06 118 aa7.21□□□□□ -1.25
PDLIM5-210ENST00000508216 FAM30AQ9NZY2 134 aa7.21□□□□□ -1.25
PDLIM5-210ENST00000508216 FSHBP01225 129 aa7.2□□□□□ -1.26
PDLIM5-210ENST00000508216 LINC00476Q8WZB0 136 aa7.2□□□□□ -1.26
PDLIM5-210ENST00000508216 TTTY12Q9BZ98 90 aa7.2□□□□□ -1.26
PDLIM5-210ENST00000508216 WFDC10AQ9H1F0 79 aa7.2□□□□□ -1.26
PDLIM5-210ENST00000508216 ODF3BA8MYP8 253 aa7.19□□□□□ -1.26
PDLIM5-210ENST00000508216 MAST4O15021 2626 aa7.18□□□□□ -1.26
PDLIM5-210ENST00000508216 ASH1LQ9NR48 2969 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-210ENST00000508216 B4DSR2 109 aa7.17□□□□□ -1.26
PDLIM5-210ENST00000508216 COX17Q14061 63 aa7.17□□□□□ -1.26
PDLIM5-210ENST00000508216 ZNF702PQ9H963 129 aa7.17□□□□□ -1.26
PDLIM5-210ENST00000508216 FLNBO75369 2602 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-210ENST00000508216 CYSRT1A8MQ03 144 aa7.16□□□□□ -1.26
PDLIM5-210ENST00000508216 DEFB103AP81534 67 aa7.16□□□□□ -1.26
PDLIM5-210ENST00000508216 Q8N9L7 120 aa7.16□□□□□ -1.26
PDLIM5-210ENST00000508216 Q8NAQ8 132 aa7.16□□□□□ -1.26
PDLIM5-210ENST00000508216 ODF3L2Q3SX64 289 aa7.15□□□□□ -1.26
PDLIM5-210ENST00000508216 MINOS1Q5TGZ0 78 aa7.15□□□□□ -1.26
PDLIM5-210ENST00000508216 TMEM105Q8N8V8 129 aa7.15□□□□□ -1.26
PDLIM5-210ENST00000508216 GCN1Q92616 2671 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-210ENST00000508216 KRTAP4-8Q9BYQ9 185 aa7.15□□□□□ -1.27
PDLIM5-210ENST00000508216 CEP250Q9BV73 2442 aa7.15□□□□□ -1.27
PDLIM5-210ENST00000508216 IGHV3OR16-8A0A075B7F1 116 aa7.14□□□□□ -1.27
PDLIM5-210ENST00000508216 A0A1W2PNM2 257 aa7.14□□□□□ -1.27
PDLIM5-210ENST00000508216 ZFP36P26651 326 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-210ENST00000508216 Q6ZQY7 126 aa7.14□□□□□ -1.27
PDLIM5-210ENST00000508216 COA5Q86WW8 74 aa7.14□□□□□ -1.27
PDLIM5-210ENST00000508216 PLA2G2DQ9UNK4 145 aa7.14□□□□□ -1.27
PDLIM5-210ENST00000508216 ASPMQ8IZT6 3477 aa7.14□□□□□ -1.27
PDLIM5-210ENST00000508216 WDR87Q6ZQQ6 2873 aa7.14□□□□□ -1.27
PDLIM5-210ENST00000508216 EP300Q09472 2414 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-210ENST00000508216 HIGD2BQ4VC39 106 aa7.13□□□□□ -1.27
PDLIM5-210ENST00000508216 C9orf163Q8N9P6 203 aa7.13□□□□□ -1.27
PDLIM5-210ENST00000508216 ST20-AS1Q8NBB2 130 aa7.13□□□□□ -1.27
PDLIM5-210ENST00000508216 SPTBN2O15020 2390 aa7.13□□□□□ -1.27
PDLIM5-210ENST00000508216 SPAG11BQ08648 103 aa7.13□□□□□ -1.27
PDLIM5-210ENST00000508216 URB1O60287 2271 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-210ENST00000508216 SPINK7P58062 85 aa7.12□□□□□ -1.27
PDLIM5-210ENST00000508216 PRB3Q04118 309 aaPredicted RBP7.12□□□□□ -1.27
PDLIM5-210ENST00000508216 PRR4Q16378 134 aa7.12□□□□□ -1.27
PDLIM5-210ENST00000508216 C10orf25Q5T742 122 aa7.12□□□□□ -1.27
PDLIM5-210ENST00000508216 DPM3Q9P2X0 92 aa7.12□□□□□ -1.27
PDLIM5-210ENST00000508216 ASXL3Q9C0F0 2248 aa7.12□□□□□ -1.27
PDLIM5-210ENST00000508216 DSCR9P59020 149 aa7.11□□□□□ -1.27
PDLIM5-210ENST00000508216 ADM2Q7Z4H4 148 aa7.11□□□□□ -1.27
PDLIM5-210ENST00000508216 Q8N9W7 124 aa7.11□□□□□ -1.27
PDLIM5-210ENST00000508216 ZFYVE26Q68DK2 2539 aa7.11□□□□□ -1.27
PDLIM5-210ENST00000508216 SPEGQ15772 3267 aa7.11□□□□□ -1.27
PDLIM5-210ENST00000508216 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
PDLIM5-210ENST00000508216 IGHV3OR16-13A0A075B7E8 117 aa7.1□□□□□ -1.27
PDLIM5-210ENST00000508216 IGHV3-74A0A0B4J1X5 117 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms