RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 MAP1LC3BQ9GZQ8 125 aa4.46□□□□□ -1.7
PFDN1-202ENST00000507185 TRAV1-1A0A0B4J248 108 aa4.45□□□□□ -1.7
PFDN1-202ENST00000507185 LOC107984640A0A0U1RRK4 108 aa4.45□□□□□ -1.7
PFDN1-202ENST00000507185 A0A1W2PNN7 141 aa4.45□□□□□ -1.7
PFDN1-202ENST00000507185 CCL25O15444 150 aa4.45□□□□□ -1.7
PFDN1-202ENST00000507185 PFDN1O60925 122 aa4.45□□□□□ -1.7
PFDN1-202ENST00000507185 C9orf116Q5BN46 136 aaPredicted RBP4.45□□□□□ -1.7
PFDN1-202ENST00000507185 RPL7L1Q6DKI1 246 aaKnown RBP4.45□□□□□ -1.7
PFDN1-202ENST00000507185 OR2D3Q8NGH3 330 aa4.45□□□□□ -1.7
PFDN1-202ENST00000507185 BTF3L4Q96K17 158 aa4.45□□□□□ -1.7
PFDN1-202ENST00000507185 FAM210AQ96ND0 272 aa4.45□□□□□ -1.7
PFDN1-202ENST00000507185 CAMK2N2Q96S95 79 aa4.45□□□□□ -1.7
PFDN1-202ENST00000507185 A0A1B0GVX0 72 aa4.44□□□□□ -1.7
PFDN1-202ENST00000507185 TCAPO15273 167 aa4.44□□□□□ -1.7
PFDN1-202ENST00000507185 APCSP02743 223 aa4.44□□□□□ -1.7
PFDN1-202ENST00000507185 FGF6P10767 208 aa4.44□□□□□ -1.7
PFDN1-202ENST00000507185 PMVKQ15126 192 aa4.44□□□□□ -1.7
PFDN1-202ENST00000507185 PCP2Q8IVA1 136 aa4.44□□□□□ -1.7
PFDN1-202ENST00000507185 MRAP2Q96G30 205 aa4.44□□□□□ -1.7
PFDN1-202ENST00000507185 NIT2Q9NQR4 276 aa4.44□□□□□ -1.7
PFDN1-202ENST00000507185 IGLV4-69A0A075B6H9 119 aa4.43□□□□□ -1.7
PFDN1-202ENST00000507185 FXYD6-FXYD2A0A087WZ82 144 aa4.43□□□□□ -1.7
PFDN1-202ENST00000507185 ZNF861PO60384 105 aa4.43□□□□□ -1.7
PFDN1-202ENST00000507185 IGLV7-43P04211 117 aa4.43□□□□□ -1.7
PFDN1-202ENST00000507185 CXCL1P09341 107 aa4.43□□□□□ -1.7
PFDN1-202ENST00000507185 TRGC1P0CF51 173 aa4.43□□□□□ -1.7
PFDN1-202ENST00000507185 PSMB2P49721 201 aa4.43□□□□□ -1.7
PFDN1-202ENST00000507185 SS18Q15532 418 aa4.43□□□□□ -1.7
PFDN1-202ENST00000507185 OR5A1Q8NGJ0 315 aa4.43□□□□□ -1.7
PFDN1-202ENST00000507185 CBY1Q9Y3M2 126 aa4.43□□□□□ -1.7
PFDN1-202ENST00000507185 IGLV1-50A0A075B6I6 118 aa4.42□□□□□ -1.7
PFDN1-202ENST00000507185 IGHV6-1A0A0B4J1U7 121 aa4.42□□□□□ -1.7
PFDN1-202ENST00000507185 APOMO95445 188 aa4.42□□□□□ -1.7
PFDN1-202ENST00000507185 UBE2BP63146 152 aa4.42□□□□□ -1.7
PFDN1-202ENST00000507185 CTAG1AP78358 180 aa4.42□□□□□ -1.7
PFDN1-202ENST00000507185 FAM19A5Q7Z5A7 132 aaPredicted RBP4.42□□□□□ -1.7
PFDN1-202ENST00000507185 TCEAL7Q9BRU2 100 aa4.42□□□□□ -1.7
PFDN1-202ENST00000507185 RPP21Q9H633 154 aaKnown RBP4.42□□□□□ -1.7
PFDN1-202ENST00000507185 LINC00959A0A1B0GUT2 108 aa4.41□□□□□ -1.7
PFDN1-202ENST00000507185 IFNA1P01562 189 aa4.41□□□□□ -1.7
PFDN1-202ENST00000507185 NTF3P20783 257 aa4.41□□□□□ -1.7
PFDN1-202ENST00000507185 RPS20P60866 119 aaKnown RBP4.41□□□□□ -1.7
PFDN1-202ENST00000507185 EIF5AL1Q6IS14 154 aaKnown RBP4.41□□□□□ -1.7
PFDN1-202ENST00000507185 FAM213BQ8TBF2 198 aa4.41□□□□□ -1.7
PFDN1-202ENST00000507185 SFT2D1Q8WV19 159 aa4.41□□□□□ -1.7
PFDN1-202ENST00000507185 S100ZQ8WXG8 99 aa4.41□□□□□ -1.7
PFDN1-202ENST00000507185 RPL39LQ96EH5 51 aaKnown RBP4.41□□□□□ -1.7
PFDN1-202ENST00000507185 MARVELD1Q9BSK0 173 aa4.41□□□□□ -1.7
PFDN1-202ENST00000507185 COX7A2LO14548 114 aa4.4□□□□□ -1.71
PFDN1-202ENST00000507185 RPL35P42766 123 aaKnown RBP4.4□□□□□ -1.71
PFDN1-202ENST00000507185 LYZL1Q6UWQ5 148 aa4.4□□□□□ -1.71
PFDN1-202ENST00000507185 LINC00337Q8N6G1 96 aa4.4□□□□□ -1.71
PFDN1-202ENST00000507185 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
PFDN1-202ENST00000507185 ALG5Q9Y673 324 aa4.4□□□□□ -1.71
PFDN1-202ENST00000507185 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.39□□□□□ -1.71
PFDN1-202ENST00000507185 IGLC6P0CF74 106 aa4.39□□□□□ -1.71
PFDN1-202ENST00000507185 ZNF25P17030 456 aaPredicted RBP4.39□□□□□ -1.71
PFDN1-202ENST00000507185 MEF2BQ02080 365 aaPredicted RBP4.39□□□□□ -1.71
PFDN1-202ENST00000507185 Q5BKY6 102 aa4.39□□□□□ -1.71
PFDN1-202ENST00000507185 CENPWQ5EE01 88 aa4.39□□□□□ -1.71
PFDN1-202ENST00000507185 SMIM15Q7Z3B0 74 aa4.39□□□□□ -1.71
PFDN1-202ENST00000507185 KCNRGQ8N5I3 272 aa4.39□□□□□ -1.71
PFDN1-202ENST00000507185 GATD1Q8NB37 220 aa4.39□□□□□ -1.71
PFDN1-202ENST00000507185 NUP35Q8NFH5 326 aa4.39□□□□□ -1.71
PFDN1-202ENST00000507185 MED28Q9H204 178 aa4.39□□□□□ -1.71
PFDN1-202ENST00000507185 TRAV13-1A0A0B4J241 112 aa4.38□□□□□ -1.71
PFDN1-202ENST00000507185 A0A1B0GXF2 115 aa4.38□□□□□ -1.71
PFDN1-202ENST00000507185 SDHAF1A6NFY7 115 aa4.38□□□□□ -1.71
PFDN1-202ENST00000507185 F2Z2F3 143 aa4.38□□□□□ -1.71
PFDN1-202ENST00000507185 NCR2O95944 276 aa4.38□□□□□ -1.71
PFDN1-202ENST00000507185 SPAG11BQ08648 103 aa4.38□□□□□ -1.71
PFDN1-202ENST00000507185 RNASE13Q5GAN3 156 aaKnown RBP4.38□□□□□ -1.71
PFDN1-202ENST00000507185 C5orf38Q86SI9 138 aa4.38□□□□□ -1.71
PFDN1-202ENST00000507185 TSKUQ8WUA8 353 aa4.38□□□□□ -1.71
PFDN1-202ENST00000507185 TMEM242Q9NWH2 141 aa4.38□□□□□ -1.71
PFDN1-202ENST00000507185 I3L3M4 83 aa4.37□□□□□ -1.71
PFDN1-202ENST00000507185 GNG4P50150 75 aa4.37□□□□□ -1.71
PFDN1-202ENST00000507185 KRTAP11-1Q8IUC1 163 aa4.37□□□□□ -1.71
PFDN1-202ENST00000507185 RETNLBQ9BQ08 111 aa4.37□□□□□ -1.71
PFDN1-202ENST00000507185 GNG13Q9P2W3 67 aa4.37□□□□□ -1.71
PFDN1-202ENST00000507185 C19orf71A6NCJ1 209 aa4.36□□□□□ -1.71
PFDN1-202ENST00000507185 ARPC5O15511 151 aa4.36□□□□□ -1.71
PFDN1-202ENST00000507185 FOXA3P55318 350 aaPredicted RBP4.36□□□□□ -1.71
PFDN1-202ENST00000507185 C8orf17Q9NRJ1 99 aa4.36□□□□□ -1.71
PFDN1-202ENST00000507185 C1orf196B1AJZ1 125 aa4.35□□□□□ -1.71
PFDN1-202ENST00000507185 FCER1GP30273 86 aa4.35□□□□□ -1.71
PFDN1-202ENST00000507185 ORAOV1Q8WV07 137 aa4.35□□□□□ -1.71
PFDN1-202ENST00000507185 IMMP2LQ96T52 175 aa4.35□□□□□ -1.71
PFDN1-202ENST00000507185 ST20Q9HBF5 79 aa4.35□□□□□ -1.71
PFDN1-202ENST00000507185 RBM12B-AS1Q9P1G2 102 aa4.35□□□□□ -1.71
PFDN1-202ENST00000507185 C7orf77A4D0Y5 90 aa4.34□□□□□ -1.71
PFDN1-202ENST00000507185 NDUFA1O15239 70 aa4.34□□□□□ -1.71
PFDN1-202ENST00000507185 CDC42SE2Q9NRR3 84 aa4.34□□□□□ -1.71
PFDN1-202ENST00000507185 A0A096LNJ9 63 aa4.33□□□□□ -1.72
PFDN1-202ENST00000507185 LOC389332A0A1B0GUA5 103 aa4.33□□□□□ -1.72
PFDN1-202ENST00000507185 BPY2O14599 106 aa4.33□□□□□ -1.72
PFDN1-202ENST00000507185 C4orf26Q17RF5 130 aa4.33□□□□□ -1.72
PFDN1-202ENST00000507185 TEX261Q6UWH6 196 aa4.33□□□□□ -1.72
PFDN1-202ENST00000507185 C9orf62Q8N4C0 152 aa4.33□□□□□ -1.72
PFDN1-202ENST00000507185 RNASE7Q9H1E1 156 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms