RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PRSS2P07478 247 aa3.83□□□□□ -1.8
VCAN-207ENST00000507162 CKS1BP61024 79 aa3.83□□□□□ -1.8
VCAN-207ENST00000507162 C9orf62Q8N4C0 152 aa3.83□□□□□ -1.8
VCAN-207ENST00000507162 NKAPP1Q8N9T2 125 aa3.83□□□□□ -1.8
VCAN-207ENST00000507162 HIGD2AQ9BW72 106 aa3.83□□□□□ -1.8
VCAN-207ENST00000507162 MAP1LC3BQ9GZQ8 125 aa3.83□□□□□ -1.8
VCAN-207ENST00000507162 TOMM7Q9P0U1 55 aa3.83□□□□□ -1.8
VCAN-207ENST00000507162 FAM240BA0A1B0GVZ2 78 aa3.82□□□□□ -1.8
VCAN-207ENST00000507162 SCO1O75880 301 aa3.82□□□□□ -1.8
VCAN-207ENST00000507162 POLR2KP53803 58 aaKnown RBP3.82□□□□□ -1.8
VCAN-207ENST00000507162 C6orf226Q5I0X4 101 aa3.82□□□□□ -1.8
VCAN-207ENST00000507162 AKR1C8PQ5T2L2 129 aa3.82□□□□□ -1.8
VCAN-207ENST00000507162 FAM210AQ96ND0 272 aa3.82□□□□□ -1.8
VCAN-207ENST00000507162 SPRR4Q96PI1 79 aa3.82□□□□□ -1.8
VCAN-207ENST00000507162 GNB1LQ9BYB4 327 aa3.82□□□□□ -1.8
VCAN-207ENST00000507162 TRBV27A0A0K0K1C4 114 aa3.81□□□□□ -1.8
VCAN-207ENST00000507162 A0A1B0GV50 99 aa3.81□□□□□ -1.8
VCAN-207ENST00000507162 IFITM10A6NMD0 228 aa3.81□□□□□ -1.8
VCAN-207ENST00000507162 TMEM238C9JI98 176 aa3.81□□□□□ -1.8
VCAN-207ENST00000507162 PFDN1O60925 122 aa3.81□□□□□ -1.8
VCAN-207ENST00000507162 RPL35P42766 123 aaKnown RBP3.81□□□□□ -1.8
VCAN-207ENST00000507162 KRTAP19-6Q3LI70 58 aa3.81□□□□□ -1.8
VCAN-207ENST00000507162 KRTAP10-10P60014 251 aa3.8□□□□□ -1.8
VCAN-207ENST00000507162 HBBP68871 147 aa3.8□□□□□ -1.8
VCAN-207ENST00000507162 TMEM126AQ9H061 195 aa3.8□□□□□ -1.8
VCAN-207ENST00000507162 IGLV9-49A0A0B4J1Y8 123 aa3.79□□□□□ -1.8
VCAN-207ENST00000507162 MT2AP02795 61 aa3.79□□□□□ -1.8
VCAN-207ENST00000507162 RPL39P62891 51 aaKnown RBP3.79□□□□□ -1.8
VCAN-207ENST00000507162 RPL7L1Q6DKI1 246 aaKnown RBP3.79□□□□□ -1.8
VCAN-207ENST00000507162 TIMM21Q9BVV7 248 aa3.79□□□□□ -1.8
VCAN-207ENST00000507162 SSNA1O43805 119 aa3.78□□□□□ -1.8
VCAN-207ENST00000507162 RPS29P62273 56 aaKnown RBP3.78□□□□□ -1.8
VCAN-207ENST00000507162 MOBPQ13875 183 aa3.78□□□□□ -1.8
VCAN-207ENST00000507162 CENPWQ5EE01 88 aa3.78□□□□□ -1.8
VCAN-207ENST00000507162 FAM104AQ969W3 186 aa3.78□□□□□ -1.8
VCAN-207ENST00000507162 ALKBH7Q9BT30 221 aaPredicted RBP3.78□□□□□ -1.8
VCAN-207ENST00000507162 CNFNQ9BYD5 112 aa3.78□□□□□ -1.8
VCAN-207ENST00000507162 ZNF706Q9Y5V0 76 aaPredicted RBP3.78□□□□□ -1.8
VCAN-207ENST00000507162 BORCS7-ASMTA0A0B4J1R7 106 aa3.77□□□□□ -1.81
VCAN-207ENST00000507162 SMKR1H3BMG3 65 aa3.77□□□□□ -1.81
VCAN-207ENST00000507162 M0R378 163 aa3.77□□□□□ -1.81
VCAN-207ENST00000507162 MT1FP04733 61 aa3.77□□□□□ -1.81
VCAN-207ENST00000507162 RAB5BP61020 215 aa3.77□□□□□ -1.81
VCAN-207ENST00000507162 Q75L30 129 aa3.77□□□□□ -1.81
VCAN-207ENST00000507162 LINC01551Q86U37 167 aa3.77□□□□□ -1.81
VCAN-207ENST00000507162 SFT2D1Q8WV19 159 aa3.77□□□□□ -1.81
VCAN-207ENST00000507162 PAM16Q9Y3D7 125 aa3.77□□□□□ -1.81
VCAN-207ENST00000507162 KMT2DO14686 5537 aa3.76□□□□□ -1.81
VCAN-207ENST00000507162 TRBV20OR9-2A0A075B6H5 130 aa3.76□□□□□ -1.81
VCAN-207ENST00000507162 IGLV5-37A0A075B6J1 123 aa3.76□□□□□ -1.81
VCAN-207ENST00000507162 IGLV6-57P01721 117 aa3.76□□□□□ -1.81
VCAN-207ENST00000507162 GNG4P50150 75 aa3.76□□□□□ -1.81
VCAN-207ENST00000507162 Q6ZN92 141 aa3.76□□□□□ -1.81
VCAN-207ENST00000507162 SSBP3-AS1Q7Z2R9 100 aa3.76□□□□□ -1.81
VCAN-207ENST00000507162 KCNRGQ8N5I3 272 aa3.76□□□□□ -1.81
VCAN-207ENST00000507162 KRTAP3-1Q9BYR8 98 aa3.76□□□□□ -1.81
VCAN-207ENST00000507162 F8VRH5 84 aa3.75□□□□□ -1.81
VCAN-207ENST00000507162 MRPS36P82909 103 aaKnown RBP3.75□□□□□ -1.81
VCAN-207ENST00000507162 GEMIN7Q9H840 131 aaKnown RBP3.75□□□□□ -1.81
VCAN-207ENST00000507162 LGALS3P17931 250 aaKnown RBP3.74□□□□□ -1.81
VCAN-207ENST00000507162 RAB4AP20338 218 aa3.74□□□□□ -1.81
VCAN-207ENST00000507162 PAPPA-AS1Q5QFB9 102 aa3.74□□□□□ -1.81
VCAN-207ENST00000507162 Q8IZM0 81 aa3.74□□□□□ -1.81
VCAN-207ENST00000507162 LINC01561Q8N1V8 128 aa3.74□□□□□ -1.81
VCAN-207ENST00000507162 ENKURQ8TC29 256 aa3.74□□□□□ -1.81
VCAN-207ENST00000507162 SMCR5Q8TEV8 140 aa3.74□□□□□ -1.81
VCAN-207ENST00000507162 TIMM17AQ99595 171 aa3.74□□□□□ -1.81
VCAN-207ENST00000507162 BIN3Q9NQY0 253 aa3.74□□□□□ -1.81
VCAN-207ENST00000507162 SPANXA1Q9NS26 97 aa3.74□□□□□ -1.81
VCAN-207ENST00000507162 RPL37P61927 97 aaKnown RBP3.73□□□□□ -1.81
VCAN-207ENST00000507162 AMN1Q8IY45 258 aa3.73□□□□□ -1.81
VCAN-207ENST00000507162 CCL20P78556 96 aa3.72□□□□□ -1.81
VCAN-207ENST00000507162 AKAP14Q86UN6 197 aa3.72□□□□□ -1.81
VCAN-207ENST00000507162 FAM213BQ8TBF2 198 aa3.72□□□□□ -1.81
VCAN-207ENST00000507162 BORCS7Q96B45 105 aa3.72□□□□□ -1.81
VCAN-207ENST00000507162 PPP1R2P9O14990 202 aa3.71□□□□□ -1.82
VCAN-207ENST00000507162 PPP1R17O96001 155 aa3.71□□□□□ -1.82
VCAN-207ENST00000507162 GIPP09681 153 aaPredicted RBP3.71□□□□□ -1.82
VCAN-207ENST00000507162 ZC2HC1BQ5TFG8 222 aa3.71□□□□□ -1.82
VCAN-207ENST00000507162 FAM231DQ6ZW35 169 aa3.71□□□□□ -1.82
VCAN-207ENST00000507162 NRACQ8N912 160 aa3.71□□□□□ -1.82
VCAN-207ENST00000507162 MBD3L1Q8WWY6 194 aa3.71□□□□□ -1.82
VCAN-207ENST00000507162 SMIM12Q96EX1 92 aa3.71□□□□□ -1.82
VCAN-207ENST00000507162 TMEM191AQ9H0A3 160 aa3.71□□□□□ -1.82
VCAN-207ENST00000507162 MED9Q9NWA0 146 aa3.71□□□□□ -1.82
VCAN-207ENST00000507162 MDN1Q9NU22 5596 aa3.71□□□□□ -1.82
VCAN-207ENST00000507162 C20orf202A1L168 122 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 TCAPO15273 167 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 ATP6V1G1O75348 118 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 IFI27P40305 119 aaPredicted RBP3.7□□□□□ -1.82
VCAN-207ENST00000507162 RAB14P61106 215 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 C9orf153Q5TBE3 101 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 HRCT1Q6UXD1 115 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 TEX43Q6ZNM6 134 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 C11orf52Q96A22 123 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 URB1-AS1Q96HZ7 61 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 NDUFA13Q9P0J0 144 aa3.7□□□□□ -1.82
VCAN-207ENST00000507162 GNG13Q9P2W3 67 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms