RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ROBO1Q9Y6N7 1651 aa0.09□□□□□ -2.39
GYPB-207ENST00000506679 F8P00451 2351 aa0.09□□□□□ -2.39
GYPB-207ENST00000506679 ADGRG4Q8IZF6 3080 aa0.09□□□□□ -2.39
GYPB-207ENST00000506679 TRAV22A0A0B4J277 110 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 UBE2L5PA0A1B0GUS4 154 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 FAM24AA6NFZ4 105 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 IFITM1P13164 125 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 UBE2L3P68036 154 aaKnown RBP0.09□□□□□ -2.4
GYPB-207ENST00000506679 HAMPP81172 84 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 TMEM170BQ5T4T1 132 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 C9orf153Q5TBE3 101 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 TMEM203Q969S6 136 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 LYSTQ99698 3801 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 IER3IP1Q9Y5U9 82 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 DCHS2Q6V1P9 2916 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 XIRP2A4UGR9 3374 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 SHANK2Q9UPX8 1470 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 CSMD3Q7Z407 3707 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 DNAH1Q9P2D7 4330 aa0.09□□□□□ -2.4
GYPB-207ENST00000506679 FRYLO94915 3013 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 AHCTF1Q8WYP5 2266 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 APC2O95996 2303 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 MGAQ8IWI9 3026 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 OOSP1A8MZH6 123 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 M0R3E3 92 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 HMGN4O00479 90 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 SNAPC5O75971 98 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 CFDP00746 253 aaPredicted RBP0.08□□□□□ -2.4
GYPB-207ENST00000506679 MT4P47944 62 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 GNG4P50150 75 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 MRPS10P82664 201 aaKnown RBP0.08□□□□□ -2.4
GYPB-207ENST00000506679 UQCR10Q9UDW1 63 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 LINC01558Q9Y6Z2 57 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 CDH23Q9H251 3354 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 FAM135AQ9P2D6 1515 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 PKHD1P08F94 4074 aa0.08□□□□□ -2.4
GYPB-207ENST00000506679 ANK2Q01484 3957 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 PKD1P98161 4303 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 DMXL1Q9Y485 3027 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 A0A1B0GV90 55 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 IGLC7A0M8Q6 106 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 C10orf142B7Z368 130 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 CORTO00230 105 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 PPP3R1P63098 170 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 DCDP81605 110 aaKnown RBP0.07□□□□□ -2.4
GYPB-207ENST00000506679 WFDC2Q14508 124 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 WHAMMP3Q1A5X7 153 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 Q8IZM0 81 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 TSLPQ969D9 159 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 C2orf88Q9BSF0 95 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 DPH3P1Q9H4G8 78 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 LINC00472Q9H8W2 130 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 LINC00846Q9NV44 126 aa0.07□□□□□ -2.4
GYPB-207ENST00000506679 NRKQ7Z2Y5 1582 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 VPS13AQ96RL7 3174 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 LAMC1P11047 1609 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 C10orf71Q711Q0 1435 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 TET3O43151 1660 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 F6UZH7 168 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 BCE1O60756 84 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 SFT2D2O95562 160 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 MGPP08493 103 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 SPRR2DP22532 72 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 Q5VSD8 79 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 Q6JHZ5 121 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 SVBPQ8N300 66 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 FAM167A-AS1Q96KT0 104 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 SPRR2GQ9BYE4 73 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 TP53AIP1Q9HCN2 124 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 FAIMQ9NVQ4 179 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 GNG8Q9UK08 70 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 SPTBN2O15020 2390 aa0.06□□□□□ -2.4
GYPB-207ENST00000506679 H3BQ15 152 aa0.05□□□□□ -2.4
GYPB-207ENST00000506679 CHKB-CPT1BH3BT56 60 aa0.05□□□□□ -2.4
GYPB-207ENST00000506679 SPRR2EP22531 72 aa0.05□□□□□ -2.4
GYPB-207ENST00000506679 SPRR2BP35325 72 aa0.05□□□□□ -2.4
GYPB-207ENST00000506679 SPRR2AP35326 72 aa0.05□□□□□ -2.4
GYPB-207ENST00000506679 PIGYQ3MUY2 71 aa0.05□□□□□ -2.4
GYPB-207ENST00000506679 NXT2Q9NPJ8 142 aaKnown RBP0.05□□□□□ -2.4
GYPB-207ENST00000506679 CDC42SE2Q9NRR3 84 aa0.05□□□□□ -2.4
GYPB-207ENST00000506679 LINC00474Q9P2X8 69 aa0.05□□□□□ -2.4
GYPB-207ENST00000506679 BTAF1O14981 1849 aa0.05□□□□□ -2.4
GYPB-207ENST00000506679 PAPPAQ13219 1627 aa0.05□□□□□ -2.4
GYPB-207ENST00000506679 CENPEQ02224 2701 aa0.05□□□□□ -2.4
GYPB-207ENST00000506679 PPRC1Q5VV67 1664 aaKnown RBP0.05□□□□□ -2.4
GYPB-207ENST00000506679 DOPEY2Q9Y3R5 2298 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 CHD9Q3L8U1 2897 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 MYO7BQ6PIF6 2116 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 SACSQ9NZJ4 4579 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 ARHGEF5Q12774 1597 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 DIP2CQ9Y2E4 1556 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 NAP1L6A6NFF2 107 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 COX6CP09669 75 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 GNG11P61952 73 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 DEFB109BQ30KR1 87 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 TMEM263Q8WUH6 116 aaKnown RBP0.04□□□□□ -2.4
GYPB-207ENST00000506679 TNXBP22105 4242 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 TRIOO75962 3097 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 SCAPERQ9BY12 1400 aa0.04□□□□□ -2.4
GYPB-207ENST00000506679 FAT1Q14517 4588 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms