RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 INAFM2P0DMQ5 153 aa11.5□□□□□ -0.57
PDLIM7-216ENST00000506537 RPL18AQ02543 176 aaKnown RBP11.5□□□□□ -0.57
PDLIM7-216ENST00000506537 Q8IZM0 81 aa11.5□□□□□ -0.57
PDLIM7-216ENST00000506537 PACRGQ96M98 296 aaPredicted RBP11.5□□□□□ -0.57
PDLIM7-216ENST00000506537 LINC00474Q9P2X8 69 aa11.5□□□□□ -0.57
PDLIM7-216ENST00000506537 SERF1AO75920 110 aa11.49□□□□□ -0.57
PDLIM7-216ENST00000506537 FAM19A2Q8N3H0 131 aa11.49□□□□□ -0.57
PDLIM7-216ENST00000506537 HSBP1O75506 76 aa11.48□□□□□ -0.57
PDLIM7-216ENST00000506537 PRSS2P07478 247 aa11.48□□□□□ -0.57
PDLIM7-216ENST00000506537 SPINK8P0C7L1 97 aa11.48□□□□□ -0.57
PDLIM7-216ENST00000506537 TRBV30A0A0K0K1B3 111 aa11.47□□□□□ -0.57
PDLIM7-216ENST00000506537 NUPR1O60356 82 aa11.47□□□□□ -0.57
PDLIM7-216ENST00000506537 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
PDLIM7-216ENST00000506537 Q6ZRP5 223 aa11.47□□□□□ -0.57
PDLIM7-216ENST00000506537 ZNF22P17026 224 aaPredicted RBP11.46□□□□□ -0.57
PDLIM7-216ENST00000506537 RPL37AP61513 92 aaKnown RBP11.46□□□□□ -0.57
PDLIM7-216ENST00000506537 C9orf116Q5BN46 136 aaPredicted RBP11.46□□□□□ -0.57
PDLIM7-216ENST00000506537 C6orf226Q5I0X4 101 aa11.46□□□□□ -0.57
PDLIM7-216ENST00000506537 IFI27L1Q96BM0 104 aa11.46□□□□□ -0.57
PDLIM7-216ENST00000506537 FLG2Q5D862 2391 aaPredicted RBP11.45□□□□□ -0.58
PDLIM7-216ENST00000506537 A0A1W2PNN7 141 aa11.45□□□□□ -0.58
PDLIM7-216ENST00000506537 C11orf86A6NJI1 115 aa11.45□□□□□ -0.58
PDLIM7-216ENST00000506537 CKS1BP61024 79 aa11.45□□□□□ -0.58
PDLIM7-216ENST00000506537 COX7B2Q8TF08 81 aa11.44□□□□□ -0.58
PDLIM7-216ENST00000506537 HERC1Q15751 4861 aa11.44□□□□□ -0.58
PDLIM7-216ENST00000506537 TRAV12-1A0A0B4J245 112 aa11.43□□□□□ -0.58
PDLIM7-216ENST00000506537 H3BRM9 83 aa11.43□□□□□ -0.58
PDLIM7-216ENST00000506537 CHTOPQ9Y3Y2 248 aaKnown RBP11.43□□□□□ -0.58
PDLIM7-216ENST00000506537 IGLV5-39A0A0G2JS06 123 aa11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 HIST1H2BKO60814 126 aa11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 HIST1H2BJP06899 126 aa11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 HIST1H2BOP23527 126 aa11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 HIST1H2BBP33778 126 aa11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 HIST1H2BDP58876 126 aa11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 HIST1H2BCP62807 126 aa11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 HIST2H2BEQ16778 126 aa11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 HIST1H2BHQ93079 126 aa11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 HIST1H2BNQ99877 126 aa11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 HIST1H2BMQ99879 126 aa11.42□□□□□ -0.58
PDLIM7-216ENST00000506537 NDUFC2-KCTD14E9PQ53 114 aa11.41□□□□□ -0.58
PDLIM7-216ENST00000506537 F8VRH5 84 aa11.41□□□□□ -0.58
PDLIM7-216ENST00000506537 CXCL5P42830 114 aa11.41□□□□□ -0.58
PDLIM7-216ENST00000506537 HNRNPA3P51991 378 aaKnown RBP11.41□□□□□ -0.58
PDLIM7-216ENST00000506537 GAGE2EQ4V326 116 aa11.41□□□□□ -0.58
PDLIM7-216ENST00000506537 GAGE2DQ9UEU5 116 aa11.41□□□□□ -0.58
PDLIM7-216ENST00000506537 C7orf33Q8WU49 177 aa11.4□□□□□ -0.58
PDLIM7-216ENST00000506537 FAM168BA1KXE4 195 aa11.39□□□□□ -0.59
PDLIM7-216ENST00000506537 LEPROTL1O95214 131 aa11.39□□□□□ -0.59
PDLIM7-216ENST00000506537 FAT3Q8TDW7 4589 aa11.39□□□□□ -0.59
PDLIM7-216ENST00000506537 C9orf129Q5T035 196 aaKnown RBP11.38□□□□□ -0.59
PDLIM7-216ENST00000506537 TMEM170BQ5T4T1 132 aa11.38□□□□□ -0.59
PDLIM7-216ENST00000506537 KRTAP7-1Q8IUC3 87 aa11.38□□□□□ -0.59
PDLIM7-216ENST00000506537 LRP1Q07954 4544 aaKnown RBP11.38□□□□□ -0.59
PDLIM7-216ENST00000506537 ATP6V1G1O75348 118 aa11.37□□□□□ -0.59
PDLIM7-216ENST00000506537 ODF1Q14990 250 aa11.37□□□□□ -0.59
PDLIM7-216ENST00000506537 H0Y8G0 127 aa11.36□□□□□ -0.59
PDLIM7-216ENST00000506537 FABP4P15090 132 aa11.36□□□□□ -0.59
PDLIM7-216ENST00000506537 PRR3P79522 188 aaKnown RBP11.36□□□□□ -0.59
PDLIM7-216ENST00000506537 PHF5AQ7RTV0 110 aaKnown RBP11.35□□□□□ -0.59
PDLIM7-216ENST00000506537 FAM19A5Q7Z5A7 132 aaPredicted RBP11.35□□□□□ -0.59
PDLIM7-216ENST00000506537 HSPB8Q9UJY1 196 aa11.35□□□□□ -0.59
PDLIM7-216ENST00000506537 TMEM223A0PJW6 202 aa11.34□□□□□ -0.59
PDLIM7-216ENST00000506537 S100A1P23297 94 aa11.34□□□□□ -0.59
PDLIM7-216ENST00000506537 XAGE1AQ9HD64 81 aa11.33□□□□□ -0.6
PDLIM7-216ENST00000506537 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
PDLIM7-216ENST00000506537 SERTAD4-AS1Q5TG53 156 aa11.3□□□□□ -0.6
PDLIM7-216ENST00000506537 KRTAP11-1Q8IUC1 163 aa11.3□□□□□ -0.6
PDLIM7-216ENST00000506537 ZNF625Q96I27 306 aaPredicted RBP11.29□□□□□ -0.6
PDLIM7-216ENST00000506537 PMCHL2Q9BQD1 86 aa11.29□□□□□ -0.6
PDLIM7-216ENST00000506537 M0QXV9 152 aa11.28□□□□□ -0.6
PDLIM7-216ENST00000506537 COA6Q5JTJ3 125 aaKnown RBP11.28□□□□□ -0.6
PDLIM7-216ENST00000506537 MAP1LC3CQ9BXW4 147 aa11.27□□□□□ -0.61
PDLIM7-216ENST00000506537 PSORS1C2Q9UIG4 136 aa11.27□□□□□ -0.61
PDLIM7-216ENST00000506537 PLNP26678 52 aa11.26□□□□□ -0.61
PDLIM7-216ENST00000506537 PFN2P35080 140 aa11.26□□□□□ -0.61
PDLIM7-216ENST00000506537 ERG28Q9UKR5 140 aa11.26□□□□□ -0.61
PDLIM7-216ENST00000506537 KRTAP29-1A8MX34 341 aaPredicted RBP11.25□□□□□ -0.61
PDLIM7-216ENST00000506537 DPM2O94777 84 aa11.25□□□□□ -0.61
PDLIM7-216ENST00000506537 SFTA2Q6UW10 78 aa11.24□□□□□ -0.61
PDLIM7-216ENST00000506537 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
PDLIM7-216ENST00000506537 IGKCP01834 107 aa11.23□□□□□ -0.61
PDLIM7-216ENST00000506537 TSPEAR-AS2P59090 65 aa11.23□□□□□ -0.61
PDLIM7-216ENST00000506537 C22orf24Q9Y442 160 aa11.23□□□□□ -0.61
PDLIM7-216ENST00000506537 COX17Q14061 63 aa11.21□□□□□ -0.61
PDLIM7-216ENST00000506537 C1orf137Q5JT78 98 aa11.21□□□□□ -0.61
PDLIM7-216ENST00000506537 PLA2G2DQ9UNK4 145 aa11.21□□□□□ -0.61
PDLIM7-216ENST00000506537 UBE2BP63146 152 aa11.2□□□□□ -0.62
PDLIM7-216ENST00000506537 SRSF9Q13242 221 aaKnown RBP eCLIP11.2□□□□□ -0.62
PDLIM7-216ENST00000506537 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
PDLIM7-216ENST00000506537 LEPROTO15243 131 aa11.19□□□□□ -0.62
PDLIM7-216ENST00000506537 OXTP01178 125 aa11.19□□□□□ -0.62
PDLIM7-216ENST00000506537 LINC01545Q5VT33 79 aa11.19□□□□□ -0.62
PDLIM7-216ENST00000506537 TP73-AS1Q9UF72 201 aa11.19□□□□□ -0.62
PDLIM7-216ENST00000506537 NDUFA12Q9UI09 145 aa11.19□□□□□ -0.62
PDLIM7-216ENST00000506537 IGLV5-37A0A075B6J1 123 aa11.18□□□□□ -0.62
PDLIM7-216ENST00000506537 C3orf79P0CE67 100 aa11.18□□□□□ -0.62
PDLIM7-216ENST00000506537 MRPL55Q7Z7F7 128 aaKnown RBP11.18□□□□□ -0.62
PDLIM7-216ENST00000506537 A0A0U1RRA0 63 aa11.17□□□□□ -0.62
PDLIM7-216ENST00000506537 J3QL48 77 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms