RNA–Protein interactions for RNA: ENST00000505937.2

PCDH1-205, Transcript of protocadherin 1, humanhuman

TSL 5

Gene PCDH1, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-205ENST00000505937 C2orf82Q6UX34 121 aa9.76□□□□□ -0.85
PCDH1-205ENST00000505937 TLX1NBP0CAT3 122 aa9.75□□□□□ -0.85
PCDH1-205ENST00000505937 CXCL5P42830 114 aa9.75□□□□□ -0.85
PCDH1-205ENST00000505937 KRTAP10-4P60372 401 aaPredicted RBP9.75□□□□□ -0.85
PCDH1-205ENST00000505937 BAGE3Q86Y29 109 aa9.75□□□□□ -0.85
PCDH1-205ENST00000505937 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
PCDH1-205ENST00000505937 PDZD11Q5EBL8 140 aa9.74□□□□□ -0.85
PCDH1-205ENST00000505937 DMBT1Q9UGM3 2413 aaPredicted RBP9.74□□□□□ -0.85
PCDH1-205ENST00000505937 HSBP1O75506 76 aa9.73□□□□□ -0.85
PCDH1-205ENST00000505937 TRGC2P03986 189 aa9.73□□□□□ -0.85
PCDH1-205ENST00000505937 GAGE2EQ4V326 116 aa9.73□□□□□ -0.85
PCDH1-205ENST00000505937 C9orf116Q5BN46 136 aaPredicted RBP9.73□□□□□ -0.85
PCDH1-205ENST00000505937 GAGE2DQ9UEU5 116 aa9.73□□□□□ -0.85
PCDH1-205ENST00000505937 SMIM1B2RUZ4 78 aa9.72□□□□□ -0.85
PCDH1-205ENST00000505937 NDUFC2-KCTD14E9PQ53 114 aa9.72□□□□□ -0.85
PCDH1-205ENST00000505937 IGLC3P0DOY3 106 aa9.72□□□□□ -0.85
PCDH1-205ENST00000505937 Q6ZRP5 223 aa9.72□□□□□ -0.85
PCDH1-205ENST00000505937 F8VRH5 84 aa9.71□□□□□ -0.86
PCDH1-205ENST00000505937 SPINK8P0C7L1 97 aa9.71□□□□□ -0.86
PCDH1-205ENST00000505937 COX7B2Q8TF08 81 aa9.71□□□□□ -0.86
PCDH1-205ENST00000505937 A0A1W2PNN7 141 aa9.7□□□□□ -0.86
PCDH1-205ENST00000505937 J3QL48 77 aa9.7□□□□□ -0.86
PCDH1-205ENST00000505937 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
PCDH1-205ENST00000505937 MYCBP2O75592 4640 aa9.69□□□□□ -0.86
PCDH1-205ENST00000505937 COLCA2A8K830 154 aa9.68□□□□□ -0.86
PCDH1-205ENST00000505937 PRR3P79522 188 aaKnown RBP9.68□□□□□ -0.86
PCDH1-205ENST00000505937 ZNF22P17026 224 aaPredicted RBP9.67□□□□□ -0.86
PCDH1-205ENST00000505937 CHTOPQ9Y3Y2 248 aaKnown RBP9.67□□□□□ -0.86
PCDH1-205ENST00000505937 KRTAP29-1A8MX34 341 aaPredicted RBP9.66□□□□□ -0.86
PCDH1-205ENST00000505937 TMEM170BQ5T4T1 132 aa9.66□□□□□ -0.86
PCDH1-205ENST00000505937 FAM19A5Q7Z5A7 132 aaPredicted RBP9.66□□□□□ -0.86
PCDH1-205ENST00000505937 FAM19A2Q8N3H0 131 aa9.66□□□□□ -0.86
PCDH1-205ENST00000505937 TRAV12-1A0A0B4J245 112 aa9.65□□□□□ -0.86
PCDH1-205ENST00000505937 OXTP01178 125 aa9.65□□□□□ -0.86
PCDH1-205ENST00000505937 HNRNPA3P51991 378 aaKnown RBP9.65□□□□□ -0.86
PCDH1-205ENST00000505937 IGLV5-39A0A0G2JS06 123 aa9.64□□□□□ -0.87
PCDH1-205ENST00000505937 C11orf86A6NJI1 115 aa9.64□□□□□ -0.87
PCDH1-205ENST00000505937 SERF1AO75920 110 aa9.64□□□□□ -0.87
PCDH1-205ENST00000505937 PHF5AQ7RTV0 110 aaKnown RBP9.64□□□□□ -0.87
PCDH1-205ENST00000505937 FAM168BA1KXE4 195 aa9.63□□□□□ -0.87
PCDH1-205ENST00000505937 LEPROTL1O95214 131 aa9.63□□□□□ -0.87
PCDH1-205ENST00000505937 SFTA2Q6UW10 78 aa9.63□□□□□ -0.87
PCDH1-205ENST00000505937 M0QXV9 152 aa9.62□□□□□ -0.87
PCDH1-205ENST00000505937 C9orf129Q5T035 196 aaKnown RBP9.62□□□□□ -0.87
PCDH1-205ENST00000505937 XAGE1AQ9HD64 81 aa9.62□□□□□ -0.87
PCDH1-205ENST00000505937 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
PCDH1-205ENST00000505937 SCO1O75880 301 aa9.61□□□□□ -0.87
PCDH1-205ENST00000505937 H0Y8G0 127 aa9.6□□□□□ -0.87
PCDH1-205ENST00000505937 UBE2BP63146 152 aa9.6□□□□□ -0.87
PCDH1-205ENST00000505937 PSORS1C2Q9UIG4 136 aa9.6□□□□□ -0.87
PCDH1-205ENST00000505937 LINC00310P59036 64 aa9.59□□□□□ -0.87
PCDH1-205ENST00000505937 SPINK6Q6UWN8 80 aa9.59□□□□□ -0.87
PCDH1-205ENST00000505937 LBHQ53QV2 105 aaPredicted RBP9.58□□□□□ -0.88
PCDH1-205ENST00000505937 C1orf137Q5JT78 98 aa9.58□□□□□ -0.88
PCDH1-205ENST00000505937 TMEM223A0PJW6 202 aa9.57□□□□□ -0.88
PCDH1-205ENST00000505937 FABP4P15090 132 aa9.57□□□□□ -0.88
PCDH1-205ENST00000505937 PFN2P35080 140 aa9.56□□□□□ -0.88
PCDH1-205ENST00000505937 COX17Q14061 63 aa9.56□□□□□ -0.88
PCDH1-205ENST00000505937 REG3GQ6UW15 175 aa9.56□□□□□ -0.88
PCDH1-205ENST00000505937 ERG28Q9UKR5 140 aa9.56□□□□□ -0.88
PCDH1-205ENST00000505937 NUPR1O60356 82 aa9.55□□□□□ -0.88
PCDH1-205ENST00000505937 PLNP26678 52 aa9.55□□□□□ -0.88
PCDH1-205ENST00000505937 ODF1Q14990 250 aa9.55□□□□□ -0.88
PCDH1-205ENST00000505937 SERTAD4-AS1Q5TG53 156 aa9.55□□□□□ -0.88
PCDH1-205ENST00000505937 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
PCDH1-205ENST00000505937 TP73-AS1Q9UF72 201 aa9.55□□□□□ -0.88
PCDH1-205ENST00000505937 C22orf24Q9Y442 160 aa9.55□□□□□ -0.88
PCDH1-205ENST00000505937 HIST1H2BKO60814 126 aa9.54□□□□□ -0.88
PCDH1-205ENST00000505937 HIST1H2BJP06899 126 aa9.54□□□□□ -0.88
PCDH1-205ENST00000505937 HIST1H2BOP23527 126 aa9.54□□□□□ -0.88
PCDH1-205ENST00000505937 HIST1H2BBP33778 126 aa9.54□□□□□ -0.88
PCDH1-205ENST00000505937 HIST1H2BDP58876 126 aa9.54□□□□□ -0.88
PCDH1-205ENST00000505937 HIST1H2BCP62807 126 aa9.54□□□□□ -0.88
PCDH1-205ENST00000505937 HIST2H2BEQ16778 126 aa9.54□□□□□ -0.88
PCDH1-205ENST00000505937 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.54□□□□□ -0.88
PCDH1-205ENST00000505937 HIST1H2BHQ93079 126 aa9.54□□□□□ -0.88
PCDH1-205ENST00000505937 ZNF625Q96I27 306 aaPredicted RBP9.54□□□□□ -0.88
PCDH1-205ENST00000505937 HIST1H2BNQ99877 126 aa9.54□□□□□ -0.88
PCDH1-205ENST00000505937 HIST1H2BMQ99879 126 aa9.54□□□□□ -0.88
PCDH1-205ENST00000505937 MAP1LC3CQ9BXW4 147 aa9.54□□□□□ -0.88
PCDH1-205ENST00000505937 PKHD1L1Q86WI1 4243 aa9.53□□□□□ -0.88
PCDH1-205ENST00000505937 SRSF9Q13242 221 aaKnown RBP eCLIP9.53□□□□□ -0.88
PCDH1-205ENST00000505937 MRPL55Q7Z7F7 128 aaKnown RBP9.53□□□□□ -0.88
PCDH1-205ENST00000505937 PLA2G2DQ9UNK4 145 aa9.53□□□□□ -0.88
PCDH1-205ENST00000505937 DPM2O94777 84 aa9.52□□□□□ -0.89
PCDH1-205ENST00000505937 IGLV7-43P04211 117 aa9.52□□□□□ -0.89
PCDH1-205ENST00000505937 HERVK_113P61574 105 aa9.52□□□□□ -0.89
PCDH1-205ENST00000505937 NKAPP1Q8N9T2 125 aa9.52□□□□□ -0.89
PCDH1-205ENST00000505937 LRP1Q07954 4544 aaKnown RBP9.52□□□□□ -0.89
PCDH1-205ENST00000505937 HERC1Q15751 4861 aa9.51□□□□□ -0.89
PCDH1-205ENST00000505937 ATP6V1G1O75348 118 aa9.5□□□□□ -0.89
PCDH1-205ENST00000505937 LINC00158P58513 81 aa9.5□□□□□ -0.89
PCDH1-205ENST00000505937 DIRC1Q969H9 104 aa9.5□□□□□ -0.89
PCDH1-205ENST00000505937 SND1-IT1Q9HBX3 110 aa9.5□□□□□ -0.89
PCDH1-205ENST00000505937 LINC00587B1AMM8 73 aa9.49□□□□□ -0.89
PCDH1-205ENST00000505937 IGKCP01834 107 aa9.49□□□□□ -0.89
PCDH1-205ENST00000505937 S100A1P23297 94 aa9.49□□□□□ -0.89
PCDH1-205ENST00000505937 HERV-K104P63124 156 aa9.49□□□□□ -0.89
PCDH1-205ENST00000505937 RPL24P83731 157 aaKnown RBP9.49□□□□□ -0.89
PCDH1-205ENST00000505937 KRTAP11-1Q8IUC1 163 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms