RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 CD164L2Q6UWJ8 174 aa6.08□□□□□ -1.44
NEDD9-210ENST00000505589 OR10D4PQ8NGN7 298 aa6.08□□□□□ -1.44
NEDD9-210ENST00000505589 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
NEDD9-210ENST00000505589 LINC00959A0A1B0GUT2 108 aa6.07□□□□□ -1.44
NEDD9-210ENST00000505589 LEPROTL1O95214 131 aa6.07□□□□□ -1.44
NEDD9-210ENST00000505589 RPL13AP40429 203 aaKnown RBP6.07□□□□□ -1.44
NEDD9-210ENST00000505589 APOMO95445 188 aa6.06□□□□□ -1.44
NEDD9-210ENST00000505589 G0S2P27469 103 aa6.06□□□□□ -1.44
NEDD9-210ENST00000505589 C2orf48Q96LS8 159 aa6.06□□□□□ -1.44
NEDD9-210ENST00000505589 HSPB8Q9UJY1 196 aa6.06□□□□□ -1.44
NEDD9-210ENST00000505589 F8WDY8 70 aa6.05□□□□□ -1.44
NEDD9-210ENST00000505589 UBE2D1P51668 147 aa6.05□□□□□ -1.44
NEDD9-210ENST00000505589 PRR4Q16378 134 aa6.05□□□□□ -1.44
NEDD9-210ENST00000505589 LINC00173Q6ZV60 143 aa6.05□□□□□ -1.44
NEDD9-210ENST00000505589 CAMK2N2Q96S95 79 aa6.05□□□□□ -1.44
NEDD9-210ENST00000505589 CYSLTR1Q9Y271 337 aa6.05□□□□□ -1.44
NEDD9-210ENST00000505589 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-210ENST00000505589 IGKV2-29A2NJV5 120 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-210ENST00000505589 LINC01549A6NIU2 74 aa6.04□□□□□ -1.44
NEDD9-210ENST00000505589 IGLV7-43P04211 117 aa6.04□□□□□ -1.44
NEDD9-210ENST00000505589 C3orf79P0CE67 100 aa6.04□□□□□ -1.44
NEDD9-210ENST00000505589 SMIM6P0DI80 62 aa6.04□□□□□ -1.44
NEDD9-210ENST00000505589 KRTDAPP60985 99 aa6.04□□□□□ -1.44
NEDD9-210ENST00000505589 RNF151Q2KHN1 245 aa6.04□□□□□ -1.44
NEDD9-210ENST00000505589 C9orf116Q5BN46 136 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-210ENST00000505589 C2orf66Q6UXQ4 117 aa6.04□□□□□ -1.44
NEDD9-210ENST00000505589 PRR26Q8N8Z3 221 aa6.04□□□□□ -1.44
NEDD9-210ENST00000505589 TOMM6Q96B49 74 aa6.04□□□□□ -1.44
NEDD9-210ENST00000505589 KRTAP4-8Q9BYQ9 185 aa6.04□□□□□ -1.44
NEDD9-210ENST00000505589 MUC2Q02817 5179 aa6.03□□□□□ -1.44
NEDD9-210ENST00000505589 A0A087WZ39 114 aa6.03□□□□□ -1.44
NEDD9-210ENST00000505589 A0A1W2PNN7 141 aa6.03□□□□□ -1.44
NEDD9-210ENST00000505589 COX7A2LO14548 114 aa6.03□□□□□ -1.44
NEDD9-210ENST00000505589 ATP5LO75964 103 aa6.03□□□□□ -1.44
NEDD9-210ENST00000505589 IFI27L1Q96BM0 104 aa6.03□□□□□ -1.44
NEDD9-210ENST00000505589 MAP1LC3CQ9BXW4 147 aa6.03□□□□□ -1.44
NEDD9-210ENST00000505589 CDC42SE2Q9NRR3 84 aa6.03□□□□□ -1.44
NEDD9-210ENST00000505589 H0Y9J4 135 aa6.02□□□□□ -1.45
NEDD9-210ENST00000505589 SYS1-DBNDD2H3BUS1 97 aa6.02□□□□□ -1.45
NEDD9-210ENST00000505589 RPL39P62891 51 aaKnown RBP6.02□□□□□ -1.45
NEDD9-210ENST00000505589 RPL18AQ02543 176 aaKnown RBP6.02□□□□□ -1.45
NEDD9-210ENST00000505589 JOSD1Q15040 202 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-210ENST00000505589 PYY3Q5JQD4 70 aa6.02□□□□□ -1.45
NEDD9-210ENST00000505589 ERASQ7Z444 233 aa6.02□□□□□ -1.45
NEDD9-210ENST00000505589 LINC00526Q96FQ7 95 aa6.02□□□□□ -1.45
NEDD9-210ENST00000505589 SCGB3A1Q96QR1 104 aa6.02□□□□□ -1.45
NEDD9-210ENST00000505589 C20orf202A1L168 122 aa6.01□□□□□ -1.45
NEDD9-210ENST00000505589 IGIPA6NJ69 53 aa6.01□□□□□ -1.45
NEDD9-210ENST00000505589 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.01□□□□□ -1.45
NEDD9-210ENST00000505589 PET117Q6UWS5 81 aa6.01□□□□□ -1.45
NEDD9-210ENST00000505589 MRPL52Q86TS9 123 aaKnown RBP6.01□□□□□ -1.45
NEDD9-210ENST00000505589 TMEM141Q96I45 108 aa6.01□□□□□ -1.45
NEDD9-210ENST00000505589 TIMM17AQ99595 171 aa6.01□□□□□ -1.45
NEDD9-210ENST00000505589 CSDC2Q9Y534 153 aaKnown RBP6.01□□□□□ -1.45
NEDD9-210ENST00000505589 SCGB1D1O95968 90 aa6□□□□□ -1.45
NEDD9-210ENST00000505589 NPSP0C0P6 89 aa6□□□□□ -1.45
NEDD9-210ENST00000505589 PHF5AQ7RTV0 110 aaKnown RBP6□□□□□ -1.45
NEDD9-210ENST00000505589 SPANXA1Q9NS26 97 aa6□□□□□ -1.45
NEDD9-210ENST00000505589 PYGO1Q9Y3Y4 419 aa6□□□□□ -1.45
NEDD9-210ENST00000505589 TRAV12-1A0A0B4J245 112 aa5.99□□□□□ -1.45
NEDD9-210ENST00000505589 H0Y8G0 127 aa5.99□□□□□ -1.45
NEDD9-210ENST00000505589 LINC01545Q5VT33 79 aa5.99□□□□□ -1.45
NEDD9-210ENST00000505589 Q6ZN92 141 aa5.99□□□□□ -1.45
NEDD9-210ENST00000505589 LINC00518Q8N0U6 118 aa5.99□□□□□ -1.45
NEDD9-210ENST00000505589 C12orf57Q99622 126 aa5.99□□□□□ -1.45
NEDD9-210ENST00000505589 TIMM21Q9BVV7 248 aa5.99□□□□□ -1.45
NEDD9-210ENST00000505589 MRPL35Q9NZE8 188 aaKnown RBP5.99□□□□□ -1.45
NEDD9-210ENST00000505589 UBE2D4Q9Y2X8 147 aa5.99□□□□□ -1.45
NEDD9-210ENST00000505589 IGLV4-3A0A075B6K6 122 aa5.98□□□□□ -1.45
NEDD9-210ENST00000505589 KRTAP9-6A0A140TA67 174 aa5.98□□□□□ -1.45
NEDD9-210ENST00000505589 PAPPA-AS1Q5QFB9 102 aa5.98□□□□□ -1.45
NEDD9-210ENST00000505589 TLX1NBP0CAT3 122 aa5.97□□□□□ -1.45
NEDD9-210ENST00000505589 UBE2BP63146 152 aa5.97□□□□□ -1.45
NEDD9-210ENST00000505589 MRPS36P82909 103 aaKnown RBP5.97□□□□□ -1.45
NEDD9-210ENST00000505589 PMVKQ15126 192 aa5.97□□□□□ -1.45
NEDD9-210ENST00000505589 TEX43Q6ZNM6 134 aa5.97□□□□□ -1.45
NEDD9-210ENST00000505589 NDUFA1O15239 70 aa5.96□□□□□ -1.46
NEDD9-210ENST00000505589 SPAG11BQ08648 103 aa5.96□□□□□ -1.46
NEDD9-210ENST00000505589 Q6ZUT4 128 aa5.96□□□□□ -1.46
NEDD9-210ENST00000505589 FAM104AQ969W3 186 aa5.96□□□□□ -1.46
NEDD9-210ENST00000505589 OPRPNQ99935 248 aaPredicted RBP5.96□□□□□ -1.46
NEDD9-210ENST00000505589 PMCHL2Q9BQD1 86 aa5.96□□□□□ -1.46
NEDD9-210ENST00000505589 CST9LQ9H4G1 147 aa5.96□□□□□ -1.46
NEDD9-210ENST00000505589 TRAV13-1A0A0B4J241 112 aa5.95□□□□□ -1.46
NEDD9-210ENST00000505589 F8VRH5 84 aa5.95□□□□□ -1.46
NEDD9-210ENST00000505589 DPM2O94777 84 aa5.95□□□□□ -1.46
NEDD9-210ENST00000505589 PLNP26678 52 aa5.95□□□□□ -1.46
NEDD9-210ENST00000505589 C5orf38Q86SI9 138 aa5.95□□□□□ -1.46
NEDD9-210ENST00000505589 ATOH7Q8N100 152 aa5.95□□□□□ -1.46
NEDD9-210ENST00000505589 AMELXQ99217 191 aa5.95□□□□□ -1.46
NEDD9-210ENST00000505589 VCX2Q9H322 139 aa5.95□□□□□ -1.46
NEDD9-210ENST00000505589 CHTOPQ9Y3Y2 248 aaKnown RBP5.95□□□□□ -1.46
NEDD9-210ENST00000505589 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
NEDD9-210ENST00000505589 S100A12P80511 92 aa5.94□□□□□ -1.46
NEDD9-210ENST00000505589 ZC2HC1BQ5TFG8 222 aa5.94□□□□□ -1.46
NEDD9-210ENST00000505589 C2orf88Q9BSF0 95 aa5.94□□□□□ -1.46
NEDD9-210ENST00000505589 VAMP8Q9BV40 100 aa5.94□□□□□ -1.46
NEDD9-210ENST00000505589 ZNF861PO60384 105 aa5.93□□□□□ -1.46
NEDD9-210ENST00000505589 IGKCP01834 107 aa5.93□□□□□ -1.46
NEDD9-210ENST00000505589 KRTAP1-4P0C5Y4 121 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms