RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 TSHBP01222 138 aa3.08□□□□□ -1.92
CDH9-203ENST00000505045 CNBPP62633 177 aaKnown RBP3.08□□□□□ -1.92
CDH9-203ENST00000505045 CIRBPQ14011 172 aaKnown RBP3.08□□□□□ -1.92
CDH9-203ENST00000505045 KIAA1644Q3SXP7 199 aa3.08□□□□□ -1.92
CDH9-203ENST00000505045 HIGD2BQ4VC39 106 aa3.08□□□□□ -1.92
CDH9-203ENST00000505045 OCIAD2Q56VL3 154 aa3.08□□□□□ -1.92
CDH9-203ENST00000505045 AMN1Q8IY45 258 aa3.08□□□□□ -1.92
CDH9-203ENST00000505045 ST20Q9HBF5 79 aa3.08□□□□□ -1.92
CDH9-203ENST00000505045 K7ERU9 68 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 FGF6P10767 208 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 Q6ZVH6 145 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 FAM19A2Q8N3H0 131 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 C18orf32Q8TCD1 76 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 LINC00526Q96FQ7 95 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 LRP2P98164 4655 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 TRAV8-4A0A0B4J246 113 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 TRBV6-5A0A0K0K1A5 114 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 A0A1B0GUT8 65 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 A8MWL6 223 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 HSBP1L1C9JCN9 74 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 TMEM238C9JI98 176 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 HSBP1O75506 76 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 RPL37AP61513 92 aaKnown RBP3.07□□□□□ -1.92
CDH9-203ENST00000505045 MAJINQ3KP22 176 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
CDH9-203ENST00000505045 BVES-AS1Q5T3Y7 98 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 DGAT2L7PQ6IED9 249 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 RNASEKQ6P5S7 137 aaKnown RBP3.07□□□□□ -1.92
CDH9-203ENST00000505045 ATOH7Q8N100 152 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 NUP35Q8NFH5 326 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 SPACA4Q8TDM5 124 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 CHCHD10Q8WYQ3 142 aaPredicted RBP3.07□□□□□ -1.92
CDH9-203ENST00000505045 PMCHL2Q9BQD1 86 aa3.07□□□□□ -1.92
CDH9-203ENST00000505045 A0A087WYN8 130 aa3.06□□□□□ -1.92
CDH9-203ENST00000505045 XCL1P47992 114 aa3.06□□□□□ -1.92
CDH9-203ENST00000505045 POLR2KP53803 58 aaKnown RBP3.06□□□□□ -1.92
CDH9-203ENST00000505045 COX6A2Q02221 97 aa3.06□□□□□ -1.92
CDH9-203ENST00000505045 AMMECR1LQ6DCA0 310 aa3.06□□□□□ -1.92
CDH9-203ENST00000505045 MRPL54Q6P161 138 aaKnown RBP3.06□□□□□ -1.92
CDH9-203ENST00000505045 SLC25A34Q6PIV7 304 aa3.06□□□□□ -1.92
CDH9-203ENST00000505045 TMEM191AQ9H0A3 160 aa3.06□□□□□ -1.92
CDH9-203ENST00000505045 A0A096LNI7 61 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 GVQW2A0A096LPI5 108 aaPredicted RBP3.05□□□□□ -1.92
CDH9-203ENST00000505045 IGKV2-24A0A0C4DH68 120 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 TRBV27A0A0K0K1C4 114 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 LINC00959A0A1B0GUT2 108 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 I3L3M4 83 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 MT1HL1P0DM35 61 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 CHCHD1Q96BP2 118 aaKnown RBP3.05□□□□□ -1.92
CDH9-203ENST00000505045 IGHV3-64A0A075B6Q5 118 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 SYS1-DBNDD2H3BUS1 97 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 MRPL51Q4U2R6 128 aaKnown RBP3.05□□□□□ -1.92
CDH9-203ENST00000505045 Q6ZUT4 128 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 ATP5L2Q7Z4Y8 100 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 OR5A1Q8NGJ0 315 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 SVIPQ8NHG7 77 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 FAM104AQ969W3 186 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 MRAP2Q96G30 205 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 CDC42SE2Q9NRR3 84 aa3.05□□□□□ -1.92
CDH9-203ENST00000505045 A0A1B0GXF2 115 aa3.04□□□□□ -1.92
CDH9-203ENST00000505045 GAGE10A6NGK3 116 aa3.04□□□□□ -1.92
CDH9-203ENST00000505045 H3BRM9 83 aa3.04□□□□□ -1.92
CDH9-203ENST00000505045 H7C423 109 aa3.04□□□□□ -1.92
CDH9-203ENST00000505045 CAMPP49913 170 aa3.04□□□□□ -1.92
CDH9-203ENST00000505045 RPL39P62891 51 aaKnown RBP3.04□□□□□ -1.92
CDH9-203ENST00000505045 SEC11AP67812 179 aa3.04□□□□□ -1.92
CDH9-203ENST00000505045 GTF2H5Q6ZYL4 71 aa3.04□□□□□ -1.92
CDH9-203ENST00000505045 ERASQ7Z444 233 aa3.04□□□□□ -1.92
CDH9-203ENST00000505045 URB1-AS1Q96HZ7 61 aa3.04□□□□□ -1.92
CDH9-203ENST00000505045 PLAC8Q9NZF1 115 aa3.04□□□□□ -1.92
CDH9-203ENST00000505045 UBE2D4Q9Y2X8 147 aa3.04□□□□□ -1.92
CDH9-203ENST00000505045 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.03□□□□□ -1.92
CDH9-203ENST00000505045 LEPROTL1O95214 131 aa3.03□□□□□ -1.92
CDH9-203ENST00000505045 NPYP01303 97 aa3.03□□□□□ -1.92
CDH9-203ENST00000505045 COX8AP10176 69 aa3.03□□□□□ -1.92
CDH9-203ENST00000505045 SCGB1A1P11684 91 aa3.03□□□□□ -1.92
CDH9-203ENST00000505045 FAM104BQ5XKR9 115 aa3.03□□□□□ -1.92
CDH9-203ENST00000505045 MAP1LC3CQ9BXW4 147 aa3.03□□□□□ -1.92
CDH9-203ENST00000505045 A6NDN8 102 aa3.03□□□□□ -1.93
CDH9-203ENST00000505045 D6R8Y8 96 aa3.03□□□□□ -1.93
CDH9-203ENST00000505045 K7EP34 96 aa3.03□□□□□ -1.93
CDH9-203ENST00000505045 HBBP68871 147 aa3.03□□□□□ -1.93
CDH9-203ENST00000505045 PRR3P79522 188 aaKnown RBP3.03□□□□□ -1.93
CDH9-203ENST00000505045 RIGQ13278 110 aa3.03□□□□□ -1.93
CDH9-203ENST00000505045 Q6ZRU5 148 aa3.03□□□□□ -1.93
CDH9-203ENST00000505045 OPRPNQ99935 248 aaPredicted RBP3.03□□□□□ -1.93
CDH9-203ENST00000505045 HSPB8Q9UJY1 196 aa3.03□□□□□ -1.93
CDH9-203ENST00000505045 IGLV4-69A0A075B6H9 119 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 TRAV13-1A0A0B4J241 112 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 TNFRSF6BO95407 300 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 OXTP01178 125 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 FCER1GP30273 86 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 LINC01545Q5VT33 79 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 CD164L2Q6UWJ8 174 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 LINC00173Q6ZV60 143 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 C2orf91Q6ZV80 131 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 TMEM101Q96IK0 257 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 CARD19Q96LW7 228 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 SMIM2Q9BVW6 85 aa3.02□□□□□ -1.93
CDH9-203ENST00000505045 IGHV1-58A0A0C4DH39 117 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms