RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SYS1-DBNDD2H3BUS1 97 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 SNRPEP62304 92 aaKnown RBP3.19□□□□□ -1.9
LMNB1-208ENST00000504788 LINC01545Q5VT33 79 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 Q6ZN92 141 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 Q6ZSA8 131 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 C9orf163Q8N9P6 203 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 LINC00526Q96FQ7 95 aa3.19□□□□□ -1.9
LMNB1-208ENST00000504788 PANO1I0J062 215 aa3.18□□□□□ -1.9
LMNB1-208ENST00000504788 COX7A2LO14548 114 aa3.18□□□□□ -1.9
LMNB1-208ENST00000504788 FABP4P15090 132 aa3.18□□□□□ -1.9
LMNB1-208ENST00000504788 KRTAP10-1P60331 282 aa3.18□□□□□ -1.9
LMNB1-208ENST00000504788 HERVK_113P63121 156 aa3.18□□□□□ -1.9
LMNB1-208ENST00000504788 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
LMNB1-208ENST00000504788 C10orf25Q5T742 122 aa3.18□□□□□ -1.9
LMNB1-208ENST00000504788 C2orf88Q9BSF0 95 aa3.18□□□□□ -1.9
LMNB1-208ENST00000504788 CHAC1Q9BUX1 264 aa3.18□□□□□ -1.9
LMNB1-208ENST00000504788 IGHV1-58A0A0C4DH39 117 aa3.17□□□□□ -1.9
LMNB1-208ENST00000504788 PSCAO43653 123 aa3.17□□□□□ -1.9
LMNB1-208ENST00000504788 SEC11AP67812 179 aa3.17□□□□□ -1.9
LMNB1-208ENST00000504788 CIRBPQ14011 172 aaKnown RBP3.17□□□□□ -1.9
LMNB1-208ENST00000504788 LINC01620Q4KN68 170 aa3.17□□□□□ -1.9
LMNB1-208ENST00000504788 HIGD2BQ4VC39 106 aa3.17□□□□□ -1.9
LMNB1-208ENST00000504788 SDIM1Q6ZPB5 146 aa3.17□□□□□ -1.9
LMNB1-208ENST00000504788 OR10D4PQ8NGN7 298 aa3.17□□□□□ -1.9
LMNB1-208ENST00000504788 PMCHL2Q9BQD1 86 aa3.17□□□□□ -1.9
LMNB1-208ENST00000504788 FAM30AQ9NZY2 134 aa3.17□□□□□ -1.9
LMNB1-208ENST00000504788 VPS13BQ7Z7G8 4022 aa3.17□□□□□ -1.9
LMNB1-208ENST00000504788 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.16□□□□□ -1.9
LMNB1-208ENST00000504788 TMEM223A0PJW6 202 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 EPM2AB3EWF7 344 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 ZNF561-AS1K7EIQ3 104 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 TSPEAR-AS2P59090 65 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 Q6ZRU5 148 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 C2orf48Q96LS8 159 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 HSPB8Q9UJY1 196 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 CHTOPQ9Y3Y2 248 aaKnown RBP3.16□□□□□ -1.9
LMNB1-208ENST00000504788 hDV102S1A0JD36 115 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 SPINK8P0C7L1 97 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 XGP55808 180 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 PET117Q6UWS5 81 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 C2orf82Q6UX34 121 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 KRTAP7-1Q8IUC3 87 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 Q8IZM0 81 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 ZNF625Q96I27 306 aaPredicted RBP3.16□□□□□ -1.9
LMNB1-208ENST00000504788 C6orf48Q9UBA6 75 aa3.16□□□□□ -1.9
LMNB1-208ENST00000504788 LINC00587B1AMM8 73 aa3.15□□□□□ -1.91
LMNB1-208ENST00000504788 H3BS24 57 aa3.15□□□□□ -1.91
LMNB1-208ENST00000504788 TLX1NBP0CAT3 122 aa3.15□□□□□ -1.91
LMNB1-208ENST00000504788 SPAG11BQ08648 103 aa3.15□□□□□ -1.91
LMNB1-208ENST00000504788 C14orf177Q52M58 125 aa3.15□□□□□ -1.91
LMNB1-208ENST00000504788 UNQ6190/PRO20217Q6UXQ8 127 aa3.15□□□□□ -1.91
LMNB1-208ENST00000504788 ORAOV1Q8WV07 137 aa3.15□□□□□ -1.91
LMNB1-208ENST00000504788 C12orf57Q99622 126 aa3.15□□□□□ -1.91
LMNB1-208ENST00000504788 MAP1LC3CQ9BXW4 147 aa3.15□□□□□ -1.91
LMNB1-208ENST00000504788 GEMIN7Q9H840 131 aaKnown RBP3.15□□□□□ -1.91
LMNB1-208ENST00000504788 ABCA13Q86UQ4 5058 aa3.15□□□□□ -1.91
LMNB1-208ENST00000504788 IGKV2D-26A0A0A0MRZ7 120 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 F8WDY8 70 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 PLNP26678 52 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 RNF151Q2KHN1 245 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 CFAP161Q6P656 301 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 CDIP1Q9H305 208 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.14□□□□□ -1.91
LMNB1-208ENST00000504788 IGLV5-52A0A0A0MRZ9 124 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 H0Y8G0 127 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 DPM2O94777 84 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 APOMO95445 188 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 IGKCP01834 107 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 MALP21145 153 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 GCSHP23434 173 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 SYCNQ0VAF6 134 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 MAJINQ3KP22 176 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 C9orf116Q5BN46 136 aaPredicted RBP3.14□□□□□ -1.91
LMNB1-208ENST00000504788 COX7B2Q8TF08 81 aa3.14□□□□□ -1.91
LMNB1-208ENST00000504788 A0A096LNI7 61 aa3.13□□□□□ -1.91
LMNB1-208ENST00000504788 C16orf90A8MZG2 172 aa3.13□□□□□ -1.91
LMNB1-208ENST00000504788 E9PLD3 99 aa3.13□□□□□ -1.91
LMNB1-208ENST00000504788 KRTDAPP60985 99 aa3.13□□□□□ -1.91
LMNB1-208ENST00000504788 PYY3Q5JQD4 70 aa3.13□□□□□ -1.91
LMNB1-208ENST00000504788 TMEM170BQ5T4T1 132 aa3.13□□□□□ -1.91
LMNB1-208ENST00000504788 Q6ZRP5 223 aa3.13□□□□□ -1.91
LMNB1-208ENST00000504788 STPG4Q8N801 248 aa3.13□□□□□ -1.91
LMNB1-208ENST00000504788 SPACA4Q8TDM5 124 aa3.13□□□□□ -1.91
LMNB1-208ENST00000504788 PCLOQ9Y6V0 5065 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 TRBV30A0A0K0K1B3 111 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 H3BRM9 83 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 CDK2AP2O75956 126 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 CHTF8P0CG12 524 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 KRTAP10-4P60372 401 aaPredicted RBP3.12□□□□□ -1.91
LMNB1-208ENST00000504788 Q8NDZ9 215 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 CARD19Q96LW7 228 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 CAMK2N2Q96S95 79 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 LITAFQ99732 161 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 TTTY13Q9BZ97 58 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 SRRM2Q9UQ35 2752 aaKnown RBP3.12□□□□□ -1.91
LMNB1-208ENST00000504788 NDUFA1O15239 70 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 S100A2P29034 98 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 CXCL5P42830 114 aa3.12□□□□□ -1.91
LMNB1-208ENST00000504788 JOSD1Q15040 202 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms