RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 COX7B2Q8TF08 81 aa8.55□□□□□ -1.04
PDLIM7-212ENST00000504380 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
PDLIM7-212ENST00000504380 KRTAP4-5Q9BYR2 181 aa8.55□□□□□ -1.04
PDLIM7-212ENST00000504380 FAM30AQ9NZY2 134 aa8.55□□□□□ -1.04
PDLIM7-212ENST00000504380 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.54□□□□□ -1.04
PDLIM7-212ENST00000504380 TMEM223A0PJW6 202 aa8.54□□□□□ -1.04
PDLIM7-212ENST00000504380 IGKCP01834 107 aa8.54□□□□□ -1.04
PDLIM7-212ENST00000504380 HAMPP81172 84 aa8.54□□□□□ -1.04
PDLIM7-212ENST00000504380 PET117Q6UWS5 81 aa8.54□□□□□ -1.04
PDLIM7-212ENST00000504380 NDUFA1O15239 70 aa8.53□□□□□ -1.04
PDLIM7-212ENST00000504380 LINC01545Q5VT33 79 aa8.53□□□□□ -1.04
PDLIM7-212ENST00000504380 SDIM1Q6ZPB5 146 aa8.53□□□□□ -1.04
PDLIM7-212ENST00000504380 Q8IZM0 81 aa8.53□□□□□ -1.04
PDLIM7-212ENST00000504380 IGLV5-39A0A0G2JS06 123 aa8.52□□□□□ -1.05
PDLIM7-212ENST00000504380 PLNP26678 52 aa8.52□□□□□ -1.05
PDLIM7-212ENST00000504380 CKS1BP61024 79 aa8.52□□□□□ -1.05
PDLIM7-212ENST00000504380 C9orf116Q5BN46 136 aaPredicted RBP8.52□□□□□ -1.05
PDLIM7-212ENST00000504380 C6orf48Q9UBA6 75 aa8.52□□□□□ -1.05
PDLIM7-212ENST00000504380 PANO1I0J062 215 aa8.51□□□□□ -1.05
PDLIM7-212ENST00000504380 CHTF8P0CG12 524 aa8.51□□□□□ -1.05
PDLIM7-212ENST00000504380 ATOH7Q8N100 152 aa8.5□□□□□ -1.05
PDLIM7-212ENST00000504380 LRP1BQ9NZR2 4599 aa8.49□□□□□ -1.05
PDLIM7-212ENST00000504380 F8WDY8 70 aa8.49□□□□□ -1.05
PDLIM7-212ENST00000504380 STPG4Q8N801 248 aa8.49□□□□□ -1.05
PDLIM7-212ENST00000504380 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.49□□□□□ -1.05
PDLIM7-212ENST00000504380 A0A096LNI7 61 aa8.48□□□□□ -1.05
PDLIM7-212ENST00000504380 IGKV2-24A0A0C4DH68 120 aa8.48□□□□□ -1.05
PDLIM7-212ENST00000504380 TSPEAR-AS2P59090 65 aa8.48□□□□□ -1.05
PDLIM7-212ENST00000504380 GAGE2BQ13066 116 aa8.48□□□□□ -1.05
PDLIM7-212ENST00000504380 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
PDLIM7-212ENST00000504380 HERC1Q15751 4861 aa8.47□□□□□ -1.05
PDLIM7-212ENST00000504380 LOC107984640A0A0U1RRK4 108 aa8.47□□□□□ -1.05
PDLIM7-212ENST00000504380 C20orf202A1L168 122 aa8.47□□□□□ -1.05
PDLIM7-212ENST00000504380 XGP55808 180 aa8.47□□□□□ -1.05
PDLIM7-212ENST00000504380 RPL18AQ02543 176 aaKnown RBP8.47□□□□□ -1.05
PDLIM7-212ENST00000504380 RNF151Q2KHN1 245 aa8.47□□□□□ -1.05
PDLIM7-212ENST00000504380 HSPG2P98160 4391 aa8.46□□□□□ -1.05
PDLIM7-212ENST00000504380 TRBV30A0A0K0K1B3 111 aa8.46□□□□□ -1.06
PDLIM7-212ENST00000504380 LEPROTO15243 131 aa8.46□□□□□ -1.06
PDLIM7-212ENST00000504380 CXCL5P42830 114 aa8.46□□□□□ -1.06
PDLIM7-212ENST00000504380 HERVK_113P61574 105 aa8.46□□□□□ -1.06
PDLIM7-212ENST00000504380 Q6ZSA8 131 aa8.46□□□□□ -1.06
PDLIM7-212ENST00000504380 DNAH8Q96JB1 4490 aa8.45□□□□□ -1.06
PDLIM7-212ENST00000504380 MAJINQ3KP22 176 aa8.45□□□□□ -1.06
PDLIM7-212ENST00000504380 GAGE2EQ4V326 116 aa8.45□□□□□ -1.06
PDLIM7-212ENST00000504380 Q6ZRP5 223 aa8.45□□□□□ -1.06
PDLIM7-212ENST00000504380 DPH3Q96FX2 82 aa8.45□□□□□ -1.06
PDLIM7-212ENST00000504380 GAGE2DQ9UEU5 116 aa8.45□□□□□ -1.06
PDLIM7-212ENST00000504380 PTTG1IPP53801 180 aa8.44□□□□□ -1.06
PDLIM7-212ENST00000504380 PLEKHB2Q96CS7 222 aa8.44□□□□□ -1.06
PDLIM7-212ENST00000504380 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
PDLIM7-212ENST00000504380 E9PLD3 99 aa8.43□□□□□ -1.06
PDLIM7-212ENST00000504380 J3QQQ9 107 aa8.43□□□□□ -1.06
PDLIM7-212ENST00000504380 SCGB1D1O95968 90 aa8.43□□□□□ -1.06
PDLIM7-212ENST00000504380 PFN2P35080 140 aa8.43□□□□□ -1.06
PDLIM7-212ENST00000504380 SCXQ7RTU7 201 aa8.43□□□□□ -1.06
PDLIM7-212ENST00000504380 CIRBP-AS1Q8TBR5 109 aa8.43□□□□□ -1.06
PDLIM7-212ENST00000504380 SPACA4Q8TDM5 124 aa8.43□□□□□ -1.06
PDLIM7-212ENST00000504380 NDUFA12Q9UI09 145 aa8.43□□□□□ -1.06
PDLIM7-212ENST00000504380 A0A0U1RRA0 63 aa8.42□□□□□ -1.06
PDLIM7-212ENST00000504380 TLX1NBP0CAT3 122 aa8.42□□□□□ -1.06
PDLIM7-212ENST00000504380 LGALS3P17931 250 aaKnown RBP8.42□□□□□ -1.06
PDLIM7-212ENST00000504380 ANKRD39Q53RE8 183 aa8.42□□□□□ -1.06
PDLIM7-212ENST00000504380 APOBP04114 4563 aaKnown RBP8.42□□□□□ -1.06
PDLIM7-212ENST00000504380 A0A087WYN8 130 aa8.41□□□□□ -1.06
PDLIM7-212ENST00000504380 NDUFC2-KCTD14E9PQ53 114 aa8.41□□□□□ -1.06
PDLIM7-212ENST00000504380 CDK2AP2O75956 126 aa8.41□□□□□ -1.06
PDLIM7-212ENST00000504380 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
PDLIM7-212ENST00000504380 CIRBPQ14011 172 aaKnown RBP8.41□□□□□ -1.06
PDLIM7-212ENST00000504380 TTTY13Q9BZ97 58 aa8.41□□□□□ -1.06
PDLIM7-212ENST00000504380 ERG28Q9UKR5 140 aa8.41□□□□□ -1.06
PDLIM7-212ENST00000504380 A0A1W2PNN7 141 aa8.4□□□□□ -1.06
PDLIM7-212ENST00000504380 XAGE1AQ9HD64 81 aa8.4□□□□□ -1.06
PDLIM7-212ENST00000504380 MYMXA0A1B0GTQ4 84 aa8.39□□□□□ -1.07
PDLIM7-212ENST00000504380 FAM168BA1KXE4 195 aa8.39□□□□□ -1.07
PDLIM7-212ENST00000504380 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
PDLIM7-212ENST00000504380 PKIGQ9Y2B9 76 aa8.39□□□□□ -1.07
PDLIM7-212ENST00000504380 SMIM13P0DJ93 91 aa8.38□□□□□ -1.07
PDLIM7-212ENST00000504380 NMUP48645 174 aa8.38□□□□□ -1.07
PDLIM7-212ENST00000504380 LINC00158P58513 81 aa8.38□□□□□ -1.07
PDLIM7-212ENST00000504380 MEIG1Q5JSS6 88 aa8.38□□□□□ -1.07
PDLIM7-212ENST00000504380 HERV-K104P63124 156 aa8.37□□□□□ -1.07
PDLIM7-212ENST00000504380 PLAC8Q9NZF1 115 aa8.37□□□□□ -1.07
PDLIM7-212ENST00000504380 LINC00474Q9P2X8 69 aa8.37□□□□□ -1.07
PDLIM7-212ENST00000504380 SFTA2Q6UW10 78 aa8.36□□□□□ -1.07
PDLIM7-212ENST00000504380 FAM19A5Q7Z5A7 132 aaPredicted RBP8.36□□□□□ -1.07
PDLIM7-212ENST00000504380 KRTAP7-1Q8IUC3 87 aa8.36□□□□□ -1.07
PDLIM7-212ENST00000504380 ZNF815PA8K554 130 aa8.35□□□□□ -1.07
PDLIM7-212ENST00000504380 AKR1D1P51857 326 aa8.35□□□□□ -1.07
PDLIM7-212ENST00000504380 JOSD1Q15040 202 aaPredicted RBP8.35□□□□□ -1.07
PDLIM7-212ENST00000504380 SERTAD4-AS1Q5TG53 156 aa8.35□□□□□ -1.07
PDLIM7-212ENST00000504380 PCP2Q8IVA1 136 aa8.35□□□□□ -1.07
PDLIM7-212ENST00000504380 SND1-IT1Q9HBX3 110 aa8.35□□□□□ -1.07
PDLIM7-212ENST00000504380 A0A0J9YXY3 114 aa8.34□□□□□ -1.07
PDLIM7-212ENST00000504380 HSBP1L1C9JCN9 74 aa8.34□□□□□ -1.07
PDLIM7-212ENST00000504380 DAND5Q8N907 189 aa8.34□□□□□ -1.07
PDLIM7-212ENST00000504380 COX17Q14061 63 aa8.33□□□□□ -1.08
PDLIM7-212ENST00000504380 PYY3Q5JQD4 70 aa8.33□□□□□ -1.08
PDLIM7-212ENST00000504380 PHF5AQ7RTV0 110 aaKnown RBP8.33□□□□□ -1.08
PDLIM7-212ENST00000504380 MIR7-3HGQ8N6C7 128 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms