RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 C2orf82Q6UX34 121 aa9.04□□□□□ -0.96
CYSTM1-202ENST00000504227 UNQ6190/PRO20217Q6UXQ8 127 aa9.04□□□□□ -0.96
CYSTM1-202ENST00000504227 IGKV2D-26A0A0A0MRZ7 120 aa9.03□□□□□ -0.96
CYSTM1-202ENST00000504227 TSPEAR-AS2P59090 65 aa9.03□□□□□ -0.96
CYSTM1-202ENST00000504227 CNBPP62633 177 aaKnown RBP9.03□□□□□ -0.96
CYSTM1-202ENST00000504227 CARD19Q96LW7 228 aa9.03□□□□□ -0.96
CYSTM1-202ENST00000504227 NDUFA12Q9UI09 145 aa9.03□□□□□ -0.96
CYSTM1-202ENST00000504227 MYMXA0A1B0GTQ4 84 aa9.02□□□□□ -0.97
CYSTM1-202ENST00000504227 SLPIP03973 132 aa9.02□□□□□ -0.97
CYSTM1-202ENST00000504227 SMIM6P0DI80 62 aa9.02□□□□□ -0.97
CYSTM1-202ENST00000504227 S100A12P80511 92 aa9.02□□□□□ -0.97
CYSTM1-202ENST00000504227 Q6ZRU5 148 aa9.02□□□□□ -0.97
CYSTM1-202ENST00000504227 PAM16Q9Y3D7 125 aa9.02□□□□□ -0.97
CYSTM1-202ENST00000504227 HERV-K104P63124 156 aa9.01□□□□□ -0.97
CYSTM1-202ENST00000504227 SPATA45Q537H7 98 aa9.01□□□□□ -0.97
CYSTM1-202ENST00000504227 C10orf25Q5T742 122 aa9.01□□□□□ -0.97
CYSTM1-202ENST00000504227 ZNF625Q96I27 306 aaPredicted RBP9.01□□□□□ -0.97
CYSTM1-202ENST00000504227 PGPEP1Q9NXJ5 209 aa9.01□□□□□ -0.97
CYSTM1-202ENST00000504227 IGLV5-52A0A0A0MRZ9 124 aa9□□□□□ -0.97
CYSTM1-202ENST00000504227 TRBV30A0A0K0K1B3 111 aa9□□□□□ -0.97
CYSTM1-202ENST00000504227 RNF151Q2KHN1 245 aa9□□□□□ -0.97
CYSTM1-202ENST00000504227 CDPF1Q6NVV7 123 aa9□□□□□ -0.97
CYSTM1-202ENST00000504227 ZNF815PA8K554 130 aa8.99□□□□□ -0.97
CYSTM1-202ENST00000504227 C6orf48Q9UBA6 75 aa8.99□□□□□ -0.97
CYSTM1-202ENST00000504227 PCP2Q8IVA1 136 aa8.98□□□□□ -0.97
CYSTM1-202ENST00000504227 TTTY13Q9BZ97 58 aa8.98□□□□□ -0.97
CYSTM1-202ENST00000504227 FAT2Q9NYQ8 4349 aa8.97□□□□□ -0.97
CYSTM1-202ENST00000504227 LINC00587B1AMM8 73 aa8.97□□□□□ -0.97
CYSTM1-202ENST00000504227 FUSP35637 526 aaKnown RBP eCLIP8.97□□□□□ -0.97
CYSTM1-202ENST00000504227 KRTAP10-2P60368 255 aa8.97□□□□□ -0.97
CYSTM1-202ENST00000504227 C9orf163Q8N9P6 203 aa8.97□□□□□ -0.97
CYSTM1-202ENST00000504227 PKIGQ9Y2B9 76 aa8.97□□□□□ -0.97
CYSTM1-202ENST00000504227 COX8AP10176 69 aa8.96□□□□□ -0.98
CYSTM1-202ENST00000504227 C9orf116Q5BN46 136 aaPredicted RBP8.96□□□□□ -0.98
CYSTM1-202ENST00000504227 MEIG1Q5JSS6 88 aa8.96□□□□□ -0.98
CYSTM1-202ENST00000504227 ERG28Q9UKR5 140 aa8.96□□□□□ -0.98
CYSTM1-202ENST00000504227 LOC107984640A0A0U1RRK4 108 aa8.95□□□□□ -0.98
CYSTM1-202ENST00000504227 A0A1B0GVY2 172 aa8.95□□□□□ -0.98
CYSTM1-202ENST00000504227 PFN2P35080 140 aa8.95□□□□□ -0.98
CYSTM1-202ENST00000504227 CIRBPQ14011 172 aaKnown RBP8.95□□□□□ -0.98
CYSTM1-202ENST00000504227 C14orf144Q96I85 54 aa8.95□□□□□ -0.98
CYSTM1-202ENST00000504227 HECTD4Q9Y4D8 3996 aa8.95□□□□□ -0.98
CYSTM1-202ENST00000504227 A0A0J9YXY3 114 aa8.94□□□□□ -0.98
CYSTM1-202ENST00000504227 LINC00158P58513 81 aa8.94□□□□□ -0.98
CYSTM1-202ENST00000504227 COX17Q14061 63 aa8.94□□□□□ -0.98
CYSTM1-202ENST00000504227 SCGB1D4Q6XE38 83 aa8.94□□□□□ -0.98
CYSTM1-202ENST00000504227 C12orf57Q99622 126 aa8.94□□□□□ -0.98
CYSTM1-202ENST00000504227 NDUFC2-KCTD14E9PQ53 114 aa8.93□□□□□ -0.98
CYSTM1-202ENST00000504227 DLEU1O43261 78 aa8.93□□□□□ -0.98
CYSTM1-202ENST00000504227 TLX1NBP0CAT3 122 aa8.93□□□□□ -0.98
CYSTM1-202ENST00000504227 SMIM13P0DJ93 91 aa8.93□□□□□ -0.98
CYSTM1-202ENST00000504227 GCSHP23434 173 aa8.93□□□□□ -0.98
CYSTM1-202ENST00000504227 LINC01620Q4KN68 170 aa8.93□□□□□ -0.98
CYSTM1-202ENST00000504227 SLC25A34Q6PIV7 304 aa8.93□□□□□ -0.98
CYSTM1-202ENST00000504227 BOD1L2Q8IYS8 172 aa8.93□□□□□ -0.98
CYSTM1-202ENST00000504227 A0A0U1RRA0 63 aa8.92□□□□□ -0.98
CYSTM1-202ENST00000504227 RPL18AQ02543 176 aaKnown RBP8.92□□□□□ -0.98
CYSTM1-202ENST00000504227 SDIM1Q6ZPB5 146 aa8.92□□□□□ -0.98
CYSTM1-202ENST00000504227 RYR3Q15413 4870 aa8.92□□□□□ -0.98
CYSTM1-202ENST00000504227 TIMM17BO60830 172 aa8.91□□□□□ -0.98
CYSTM1-202ENST00000504227 DNAH11Q96DT5 4516 aa8.91□□□□□ -0.98
CYSTM1-202ENST00000504227 GAGE2BQ13066 116 aa8.9□□□□□ -0.98
CYSTM1-202ENST00000504227 GAGE2EQ4V326 116 aa8.9□□□□□ -0.98
CYSTM1-202ENST00000504227 Q6ZRP5 223 aa8.9□□□□□ -0.98
CYSTM1-202ENST00000504227 LINC00518Q8N0U6 118 aa8.9□□□□□ -0.98
CYSTM1-202ENST00000504227 GAGE2DQ9UEU5 116 aa8.9□□□□□ -0.98
CYSTM1-202ENST00000504227 C16orf90A8MZG2 172 aa8.89□□□□□ -0.99
CYSTM1-202ENST00000504227 PKD1P98161 4303 aa8.89□□□□□ -0.99
CYSTM1-202ENST00000504227 TMEM238C9JI98 176 aa8.88□□□□□ -0.99
CYSTM1-202ENST00000504227 PTTG1IPP53801 180 aa8.88□□□□□ -0.99
CYSTM1-202ENST00000504227 ADAMTSL4-AS1Q5T5F5 129 aa8.88□□□□□ -0.99
CYSTM1-202ENST00000504227 MIR7-3HGQ8N6C7 128 aa8.88□□□□□ -0.99
CYSTM1-202ENST00000504227 PRO1933Q9H354 126 aa8.88□□□□□ -0.99
CYSTM1-202ENST00000504227 LINC00474Q9P2X8 69 aa8.88□□□□□ -0.99
CYSTM1-202ENST00000504227 UQCR10Q9UDW1 63 aa8.88□□□□□ -0.99
CYSTM1-202ENST00000504227 A0A096LNI7 61 aa8.87□□□□□ -0.99
CYSTM1-202ENST00000504227 IGKV2-24A0A0C4DH68 120 aa8.87□□□□□ -0.99
CYSTM1-202ENST00000504227 DPH3Q96FX2 82 aa8.87□□□□□ -0.99
CYSTM1-202ENST00000504227 LITAFQ99732 161 aa8.87□□□□□ -0.99
CYSTM1-202ENST00000504227 TP73-AS1Q9UF72 201 aa8.87□□□□□ -0.99
CYSTM1-202ENST00000504227 KRTAP10-1P60331 282 aa8.86□□□□□ -0.99
CYSTM1-202ENST00000504227 SRSF9Q13242 221 aaKnown RBP eCLIP8.86□□□□□ -0.99
CYSTM1-202ENST00000504227 DAND5Q8N907 189 aa8.86□□□□□ -0.99
CYSTM1-202ENST00000504227 SND1-IT1Q9HBX3 110 aa8.86□□□□□ -0.99
CYSTM1-202ENST00000504227 XAGE1AQ9HD64 81 aa8.86□□□□□ -0.99
CYSTM1-202ENST00000504227 Q6ZVH6 145 aa8.85□□□□□ -0.99
CYSTM1-202ENST00000504227 SPANXDQ9BXN6 97 aa8.85□□□□□ -0.99
CYSTM1-202ENST00000504227 SPANXCQ9NY87 97 aa8.85□□□□□ -0.99
CYSTM1-202ENST00000504227 HIGD1BQ9P298 99 aa8.85□□□□□ -0.99
CYSTM1-202ENST00000504227 TSTD3H0UI37 97 aa8.84□□□□□ -0.99
CYSTM1-202ENST00000504227 CHTF8P0CG12 524 aa8.84□□□□□ -0.99
CYSTM1-202ENST00000504227 COPS9Q8WXC6 57 aa8.84□□□□□ -0.99
CYSTM1-202ENST00000504227 MIEN1Q9BRT3 115 aa8.84□□□□□ -0.99
CYSTM1-202ENST00000504227 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
CYSTM1-202ENST00000504227 IFITM1P13164 125 aa8.83□□□□□ -1
CYSTM1-202ENST00000504227 C9orf129Q5T035 196 aaKnown RBP8.83□□□□□ -1
CYSTM1-202ENST00000504227 C2orf91Q6ZV80 131 aa8.83□□□□□ -1
CYSTM1-202ENST00000504227 HIST1H4GQ99525 98 aa8.83□□□□□ -1
CYSTM1-202ENST00000504227 NPC2P61916 151 aa8.82□□□□□ -1
CYSTM1-202ENST00000504227 LINC00308Q8TCZ7 52 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms