RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 M0R2N4 97 aa10.04□□□□□ -0.8
SGCA-204ENST00000504073 C6orf223Q8N319 242 aa10.04□□□□□ -0.8
SGCA-204ENST00000504073 KRTAP1-5Q9BYS1 174 aa10.04□□□□□ -0.8
SGCA-204ENST00000504073 TMEM238C9JI98 176 aa10.03□□□□□ -0.8
SGCA-204ENST00000504073 MEIG1Q5JSS6 88 aa10.03□□□□□ -0.8
SGCA-204ENST00000504073 C2orf48Q96LS8 159 aa10.03□□□□□ -0.8
SGCA-204ENST00000504073 TSPEAR-AS2P59090 65 aa10.02□□□□□ -0.81
SGCA-204ENST00000504073 C1orf134Q5TEV5 83 aa10.02□□□□□ -0.81
SGCA-204ENST00000504073 Q6ZR54 194 aa10.02□□□□□ -0.81
SGCA-204ENST00000504073 COPS9Q8WXC6 57 aa10.02□□□□□ -0.81
SGCA-204ENST00000504073 HIGD1BQ9P298 99 aa10.02□□□□□ -0.81
SGCA-204ENST00000504073 GVQW2A0A096LPI5 108 aaPredicted RBP10.01□□□□□ -0.81
SGCA-204ENST00000504073 CAMK2N2Q96S95 79 aa10.01□□□□□ -0.81
SGCA-204ENST00000504073 USP17L23D6RBM5 183 aa10□□□□□ -0.81
SGCA-204ENST00000504073 DDTP30046 118 aa10□□□□□ -0.81
SGCA-204ENST00000504073 MAPKAPK5-AS1Q8N8E1 139 aa10□□□□□ -0.81
SGCA-204ENST00000504073 TTTY13Q9BZ97 58 aa10□□□□□ -0.81
SGCA-204ENST00000504073 A0A0J9YXY3 114 aa9.99□□□□□ -0.81
SGCA-204ENST00000504073 EREGO14944 169 aa9.99□□□□□ -0.81
SGCA-204ENST00000504073 TIMM17BO60830 172 aa9.99□□□□□ -0.81
SGCA-204ENST00000504073 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
SGCA-204ENST00000504073 Q6ZVH6 145 aa9.99□□□□□ -0.81
SGCA-204ENST00000504073 C15orf56Q8N910 161 aa9.99□□□□□ -0.81
SGCA-204ENST00000504073 NTN5Q8WTR8 489 aaPredicted RBP9.99□□□□□ -0.81
SGCA-204ENST00000504073 ZNF625Q96I27 306 aaPredicted RBP9.99□□□□□ -0.81
SGCA-204ENST00000504073 PKIGQ9Y2B9 76 aa9.99□□□□□ -0.81
SGCA-204ENST00000504073 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.98□□□□□ -0.81
SGCA-204ENST00000504073 TRBV30A0A0K0K1B3 111 aa9.98□□□□□ -0.81
SGCA-204ENST00000504073 PCP4L1A6NKN8 68 aa9.98□□□□□ -0.81
SGCA-204ENST00000504073 COX17Q14061 63 aa9.98□□□□□ -0.81
SGCA-204ENST00000504073 KIAA0087Q14695 138 aa9.98□□□□□ -0.81
SGCA-204ENST00000504073 TAL2Q16559 108 aa9.98□□□□□ -0.81
SGCA-204ENST00000504073 HIGD2BQ4VC39 106 aa9.98□□□□□ -0.81
SGCA-204ENST00000504073 HIST1H4GQ99525 98 aa9.97□□□□□ -0.81
SGCA-204ENST00000504073 M0R143 59 aa9.96□□□□□ -0.82
SGCA-204ENST00000504073 HSD52Q0P140 79 aa9.96□□□□□ -0.82
SGCA-204ENST00000504073 SYCNQ0VAF6 134 aa9.96□□□□□ -0.82
SGCA-204ENST00000504073 SPANXB1Q9NS25 103 aaPredicted RBP9.96□□□□□ -0.82
SGCA-204ENST00000504073 ERG28Q9UKR5 140 aa9.96□□□□□ -0.82
SGCA-204ENST00000504073 HECTD4Q9Y4D8 3996 aa9.96□□□□□ -0.82
SGCA-204ENST00000504073 LINC00158P58513 81 aa9.95□□□□□ -0.82
SGCA-204ENST00000504073 CARD19Q96LW7 228 aa9.95□□□□□ -0.82
SGCA-204ENST00000504073 C2orf82Q6UX34 121 aa9.94□□□□□ -0.82
SGCA-204ENST00000504073 TMEM238LA0A1B0GVL6 79 aa9.93□□□□□ -0.82
SGCA-204ENST00000504073 A6NJY4 79 aa9.93□□□□□ -0.82
SGCA-204ENST00000504073 IFITM1P13164 125 aa9.93□□□□□ -0.82
SGCA-204ENST00000504073 RNF151Q2KHN1 245 aa9.93□□□□□ -0.82
SGCA-204ENST00000504073 Q6ZRN7 208 aaPredicted RBP9.93□□□□□ -0.82
SGCA-204ENST00000504073 C2orf91Q6ZV80 131 aa9.93□□□□□ -0.82
SGCA-204ENST00000504073 LECT2O14960 151 aa9.92□□□□□ -0.82
SGCA-204ENST00000504073 CTAG1AP78358 180 aa9.92□□□□□ -0.82
SGCA-204ENST00000504073 UNQ6190/PRO20217Q6UXQ8 127 aa9.92□□□□□ -0.82
SGCA-204ENST00000504073 SPANXDQ9BXN6 97 aa9.92□□□□□ -0.82
SGCA-204ENST00000504073 SPANXCQ9NY87 97 aa9.92□□□□□ -0.82
SGCA-204ENST00000504073 SMIM13P0DJ93 91 aa9.91□□□□□ -0.82
SGCA-204ENST00000504073 PFN2P35080 140 aa9.91□□□□□ -0.82
SGCA-204ENST00000504073 RPL24P83731 157 aaKnown RBP9.91□□□□□ -0.82
SGCA-204ENST00000504073 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
SGCA-204ENST00000504073 KIAA1109Q2LD37 5005 aa9.9□□□□□ -0.82
SGCA-204ENST00000504073 Q6ZRU5 148 aa9.9□□□□□ -0.82
SGCA-204ENST00000504073 TP73-AS1Q9UF72 201 aa9.9□□□□□ -0.82
SGCA-204ENST00000504073 DNAH10Q8IVF4 4471 aa9.9□□□□□ -0.83
SGCA-204ENST00000504073 A0A0U1RRA0 63 aa9.89□□□□□ -0.83
SGCA-204ENST00000504073 PTTG1IPP53801 180 aa9.89□□□□□ -0.83
SGCA-204ENST00000504073 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
SGCA-204ENST00000504073 C6orf48Q9UBA6 75 aa9.89□□□□□ -0.83
SGCA-204ENST00000504073 A0A087WTM6 91 aa9.88□□□□□ -0.83
SGCA-204ENST00000504073 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
SGCA-204ENST00000504073 CEND1Q8N111 149 aa9.88□□□□□ -0.83
SGCA-204ENST00000504073 MIR7-3HGQ8N6C7 128 aa9.88□□□□□ -0.83
SGCA-204ENST00000504073 PPDPFQ9H3Y8 114 aa9.88□□□□□ -0.83
SGCA-204ENST00000504073 C10orf25Q5T742 122 aa9.87□□□□□ -0.83
SGCA-204ENST00000504073 Q8N814 137 aa9.87□□□□□ -0.83
SGCA-204ENST00000504073 A6NDN8 102 aa9.86□□□□□ -0.83
SGCA-204ENST00000504073 NDUFC2-KCTD14E9PQ53 114 aa9.86□□□□□ -0.83
SGCA-204ENST00000504073 LITAFQ99732 161 aa9.86□□□□□ -0.83
SGCA-204ENST00000504073 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.85□□□□□ -0.83
SGCA-204ENST00000504073 LOC107984640A0A0U1RRK4 108 aa9.85□□□□□ -0.83
SGCA-204ENST00000504073 TLX1NBP0CAT3 122 aa9.85□□□□□ -0.83
SGCA-204ENST00000504073 HINT1P49773 126 aaPredicted RBP9.84□□□□□ -0.83
SGCA-204ENST00000504073 WFDC2Q14508 124 aa9.84□□□□□ -0.83
SGCA-204ENST00000504073 ADAMTSL4-AS1Q5T5F5 129 aa9.84□□□□□ -0.83
SGCA-204ENST00000504073 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
SGCA-204ENST00000504073 LINC00308Q8TCZ7 52 aa9.84□□□□□ -0.83
SGCA-204ENST00000504073 VPS13DQ5THJ4 4388 aa9.84□□□□□ -0.83
SGCA-204ENST00000504073 RPL18AQ02543 176 aaKnown RBP9.83□□□□□ -0.84
SGCA-204ENST00000504073 BATFQ16520 125 aa9.83□□□□□ -0.84
SGCA-204ENST00000504073 C9orf116Q5BN46 136 aaPredicted RBP9.83□□□□□ -0.84
SGCA-204ENST00000504073 LINC00336Q6ZUF6 198 aa9.83□□□□□ -0.84
SGCA-204ENST00000504073 DAND5Q8N907 189 aa9.83□□□□□ -0.84
SGCA-204ENST00000504073 NPC2P61916 151 aa9.82□□□□□ -0.84
SGCA-204ENST00000504073 BVES-AS1Q5T3Y7 98 aa9.82□□□□□ -0.84
SGCA-204ENST00000504073 KMT2AQ03164 3969 aa9.82□□□□□ -0.84
SGCA-204ENST00000504073 SND1-IT1Q9HBX3 110 aa9.81□□□□□ -0.84
SGCA-204ENST00000504073 ABCA13Q86UQ4 5058 aa9.8□□□□□ -0.84
SGCA-204ENST00000504073 LOC107984156A0A0G2JMH3 177 aa9.8□□□□□ -0.84
SGCA-204ENST00000504073 GAGE2EQ4V326 116 aa9.8□□□□□ -0.84
SGCA-204ENST00000504073 ARL17AQ8IVW1 177 aa9.8□□□□□ -0.84
SGCA-204ENST00000504073 C9orf163Q8N9P6 203 aa9.8□□□□□ -0.84
SGCA-204ENST00000504073 LINC00474Q9P2X8 69 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms